SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for _gap_,89260,_gap_ superfamilies in all Bacterial genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

89260 - Collagen-binding domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

39 sequences contain the _gap_,89260,_gap_ domain architecture in Bacteria.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Aciduliprofundum boonei T469: gi|289596436|ref|YP_003483132.1|

Methanosarcina barkeri str. Fusaro: gi|73669089|ref|YP_305104.1|

Methanosarcina acetivorans C2A: gi|20092439|ref|NP_618514.1|

Pseudomonas fluorescens SBW25: gi|229591431|ref|YP_002873550.1|

Pseudomonas sp. TKP: gi|568141172|ref|YP_008933757.1|

Dickeya zeae Ech1591: gi|251787856|ref|YP_003002577.1|

Nitrosococcus oceani ATCC 19707: gi|77163767|ref|YP_342292.1|

Nitrosococcus halophilus Nc4: gi|292493866|ref|YP_003529305.1|

Nitrosococcus watsonii C-113: gi|300113046|ref|YP_003759621.1|

Allochromatium vinosum DSM 180: gi|288942766|ref|YP_003445006.1|

Shewanella denitrificans OS217: gi|91794439|ref|YP_564090.1|

Azospirillum brasilense Sp245: gi|392378668|ref|YP_004985828.1|

Azospirillum sp. B510: gi|288962285|ref|YP_003452580.1|

Azospirillum lipoferum 4B: gi|374294201|ref|YP_005041226.1|

Sorangium cellulosum 'So ce 56': gi|162457542|ref|YP_001619909.1|

Candidatus Solibacter usitatus Ellin6076: gi|116624787|ref|YP_826943.1|

Brachyspira hyodysenteriae WA1: gi|225619879|ref|YP_002721136.1|

Brachyspira pilosicoli 95/1000: gi|300870047|ref|YP_003784918.1|

Brachyspira intermedia PWS/A: gi|384208399|ref|YP_005594119.1|

Brachyspira murdochii DSM 12563: gi|296125686|ref|YP_003632938.1|

Pirellula staleyi DSM 6068: gi|283779870|ref|YP_003370625.1|

Rhodopirellula baltica SH 1: gi|32475979|ref|NP_868973.1|

Planctomyces limnophilus DSM 3776: gi|296121704|ref|YP_003629482.1|

Isosphaera pallida ATCC 43644: gi|320104437|ref|YP_004180028.1|

Bacillus megaterium DSM 319: gi|295705352|ref|YP_003598427.1|

Paenibacillus terrae HPL-003: gi|374324988|ref|YP_005078117.1|

Streptococcus agalactiae A909: gi|76788705|ref|YP_329906.1|

Lactobacillus acidophilus 30SC: gi|325955901|ref|YP_004286511.1|

Lactobacillus amylovorus GRL1118: gi|385816798|ref|YP_005853188.1|

Mahella australiensis 50-1 BON: gi|332982187|ref|YP_004463628.1|

Roseburia intestinalis: gi|479202053|ref|YP_007830644.1|

Roseburia hominis A2-183: gi|347533526|ref|YP_004840289.1|

Eubacterium rectale M104/1: gi|479216239|ref|YP_007843621.1|

Chloroflexus aurantiacus J-10-fl: gi|163846971|ref|YP_001635015.1|

Chloroflexus aggregans DSM 9485: gi|219848673|ref|YP_002463106.1|

Chloroflexus sp. Y-400-fl: gi|222524792|ref|YP_002569263.1|

Chloroflexus sp. MS-G: WP_031458268.1

Herpetosiphon aurantiacus DSM 785: gi|159896578|ref|YP_001542825.1|

Caldilinea aerophila DSM 14535 = NBRC 104270: gi|383763588|ref|YP_005442570.1|