SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 52172,55785,47384,55874,52172 superfamilies in all Eubacterial genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52172 - CheY-like
55785 - PYP-like sensor domain (PAS domain)
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

107 sequences contain the 52172,55785,47384,55874,52172 domain architecture in Eubacteria.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Pseudomonas fulva 12-X: gi|333899831|ref|YP_004473704.1|

Pseudomonas stutzeri A1501: gi|146280699|ref|YP_001170852.1|

Pseudomonas syringae pv. tomato str. DC3000: gi|28869904|ref|NP_792523.1|

Xanthomonas campestris pv. campestris str. B100: gi|188992557|ref|YP_001904567.1|

Xanthomonas axonopodis pv. citri str. 306: gi|21242027|ref|NP_641609.1|

Pseudoxanthomonas suwonensis 11-1: gi|319787874|ref|YP_004147349.1|

Mesorhizobium loti MAFF303099: gi|13472175|ref|NP_103742.1|

Agrobacterium tumefaciens str. C58: gi|159186651|ref|NP_396444.2|

Methylobacterium radiotolerans JCM 2831: gi|170748607|ref|YP_001754867.1|

Methylobacterium populi BJ001: gi|188579324|ref|YP_001922769.1|

Methylobacterium populi BJ001: gi|188582205|ref|YP_001925650.1|

Methylobacterium sp. 4-46: gi|170742826|ref|YP_001771481.1|

Methylobacterium extorquens AM1: gi|240136800|ref|YP_002961267.1|

Methylobacterium extorquens AM1: gi|240139593|ref|YP_002964069.1|

Methylobacterium chloromethanicum CM4: gi|218528101|ref|YP_002418917.1|

Methylobacterium chloromethanicum CM4: gi|218531018|ref|YP_002421834.1|

Acetobacter pasteurianus IFO 3283-01: gi|258542118|ref|YP_003187551.1|

Gluconacetobacter diazotrophicus PAl 5: gi|162149056|ref|YP_001603517.1|

Gluconacetobacter xylinus NBRC 3288: gi|347760177|ref|YP_004867738.1|

Sphingobium japonicum UT26S: gi|294146511|ref|YP_003559177.1|

Novosphingobium aromaticivorans DSM 12444: gi|146275720|ref|YP_001165880.1|

Phenylobacterium zucineum HLK1: gi|197104163|ref|YP_002129540.1|

Magnetococcus marinus MC-1: gi|117925404|ref|YP_866021.1|

Acidovorax avenae subsp. avenae ATCC 19860: gi|326317128|ref|YP_004234800.1|

Acidovorax citrulli AAC00-1: gi|120611638|ref|YP_971316.1|

Delftia acidovorans SPH-1: gi|160899840|ref|YP_001565422.1|

Delftia sp. Cs1-4: gi|333914046|ref|YP_004487778.1|

Ramlibacter tataouinensis TTB310: gi|337279868|ref|YP_004619340.1|

Ramlibacter tataouinensis TTB310: gi|337280192|ref|YP_004619664.1|

Burkholderia sp. CCGE1002: gi|295676500|ref|YP_003605024.1|

Burkholderia sp. CCGE1002: gi|295699015|ref|YP_003606908.1|

Burkholderia sp. RPE64: gi|507516081|ref|YP_008037698.1|

Burkholderia sp. RPE64: gi|507526818|ref|YP_008048441.1|

Ralstonia pickettii 12D: gi|241664378|ref|YP_002982738.1|

Ralstonia eutropha H16: gi|116696290|ref|YP_841866.1|

Cupriavidus necator N-1: gi|339323606|ref|YP_004682500.1|

Ralstonia eutropha JMP134: gi|73538800|ref|YP_299167.1|

Ralstonia eutropha JMP134: gi|73538906|ref|YP_299273.1|

Burkholderia xenovorans LB400: gi|91783499|ref|YP_558705.1|

Burkholderia phymatum STM815: gi|186475757|ref|YP_001857227.1|

Burkholderia phytofirmans PsJN: gi|187923860|ref|YP_001895502.1|

Burkholderia rhizoxinica HKI 454: gi|312796535|ref|YP_004029457.1|

Azoarcus sp. KH32C: gi|470172333|ref|YP_007553219.1|

Stigmatella aurantiaca DW4/3-1: gi|310817726|ref|YP_003950084.1|

Anaeromyxobacter dehalogenans 2CP-1: gi|220919457|ref|YP_002494761.1|

Anaeromyxobacter sp. Fw109-5: gi|153007209|ref|YP_001381534.1|

Sorangium cellulosum 'So ce 56': gi|162455108|ref|YP_001617475.1|

Haliangium ochraceum DSM 14365: gi|262197820|ref|YP_003269029.1|

Pelobacter propionicus DSM 2379: gi|118581064|ref|YP_902314.1|

Geobacter metallireducens GS-15: gi|404496775|ref|YP_006720881.1|

Geobacter bemidjiensis Bem: gi|197118335|ref|YP_002138762.1|

Geobacter bemidjiensis Bem: gi|197118871|ref|YP_002139298.1|

Geobacter sp. M21: gi|253700346|ref|YP_003021535.1|

Geobacter sp. M21: gi|253700882|ref|YP_003022071.1|

Geobacter daltonii FRC-32: gi|222054943|ref|YP_002537305.1|

Geobacter daltonii FRC-32: gi|222055858|ref|YP_002538220.1|

Desulfovibrio africanus str. Walvis Bay: gi|374300375|ref|YP_005052014.1|

Desulfobacterium autotrophicum HRM2: gi|224368799|ref|YP_002602960.1|

Desulfobacterium autotrophicum HRM2: gi|224370281|ref|YP_002604445.1|

Desulfatibacillum alkenivorans AK-01: gi|218779448|ref|YP_002430766.1|

Desulfobulbus propionicus DSM 2032: gi|320353194|ref|YP_004194533.1|

Desulfobulbus propionicus DSM 2032: gi|320354584|ref|YP_004195923.1|

Desulfurivibrio alkaliphilus AHT2: gi|297569478|ref|YP_003690822.1|

Candidatus Chloracidobacterium thermophilum B: gi|347756773|ref|YP_004864336.1|

Flexistipes sinusarabici DSM 4947: gi|336323039|ref|YP_004603006.1|

Calditerrivibrio nitroreducens DSM 19672: gi|313672758|ref|YP_004050869.1|

Spirochaeta thermophila DSM 6192: gi|307718837|ref|YP_003874369.1|

Treponema azotonutricium ZAS-9: gi|333995286|ref|YP_004527899.1|

Spirochaeta caldaria DSM 7334: gi|339499430|ref|YP_004697465.1|

Spirochaeta smaragdinae DSM 11293: gi|302338341|ref|YP_003803547.1|

Spirochaeta smaragdinae DSM 11293: gi|302338730|ref|YP_003803936.1|

Turneriella parva DSM 21527: gi|392402688|ref|YP_006439300.1|

Planctomyces brasiliensis DSM 5305: gi|325109506|ref|YP_004270574.1|

Pedobacter saltans DSM 12145: gi|325104428|ref|YP_004274082.1|

Bacteroides sp. CF50: gi|549483182|ref|YP_008616869.1|

Dyadobacter fermentans DSM 18053: gi|255034925|ref|YP_003085546.1|

Dyadobacter fermentans DSM 18053: gi|255037080|ref|YP_003087701.1|

Rhodothermus marinus DSM 4252: gi|268317955|ref|YP_003291674.1|

Melioribacter roseus P3M: gi|397691179|ref|YP_006528433.1|

Chloroflexus aurantiacus J-10-fl: gi|163845836|ref|YP_001633880.1|

Chloroflexus aggregans DSM 9485: gi|219848052|ref|YP_002462485.1|

Chloroflexus sp. Y-400-fl: gi|222523547|ref|YP_002568017.1|

Roseiflexus castenholzii DSM 13941: gi|156742625|ref|YP_001432754.1|

Roseiflexus sp. RS-1: gi|148657168|ref|YP_001277373.1|

Actinoplanes missouriensis 431: gi|383777031|ref|YP_005461597.1|

Actinoplanes missouriensis 431: gi|383778271|ref|YP_005462837.1|

Nostoc sp. PCC 7524: gi|427729193|ref|YP_007075430.1|

Nostoc sp. PCC 7524: gi|427729323|ref|YP_007075560.1|

Nostoc sp. PCC 7120: gi|17229338|ref|NP_485886.1|

Nostoc punctiforme PCC 73102: gi|186682598|ref|YP_001865794.1|

Nostoc punctiforme PCC 73102: gi|186683181|ref|YP_001866377.1|

Nostoc punctiforme PCC 73102: gi|186683692|ref|YP_001866888.1|

Nostoc sp. PCC 7107: gi|427707516|ref|YP_007049893.1|

Nostoc sp. PCC 7107: gi|427708224|ref|YP_007050601.1|

Anabaena variabilis ATCC 29413: gi|75910949|ref|YP_325245.1|

Anabaena variabilis ATCC 29413: gi|75910979|ref|YP_325275.1|

Calothrix sp. PCC 7507: gi|427715591|ref|YP_007063585.1|

Calothrix sp. PCC 7507: gi|427719125|ref|YP_007067119.1|

Rivularia sp. PCC 7116: gi|427736847|ref|YP_007056391.1|

Rivularia sp. PCC 7116: gi|427738914|ref|YP_007058458.1|

Gloeobacter violaceus PCC 7421: gi|37520203|ref|NP_923580.1|

Gloeobacter violaceus PCC 7421: gi|37523003|ref|NP_926380.1|

Gloeocapsa sp. PCC 7428: gi|434393412|ref|YP_007128359.1|

Microcoleus sp. PCC 7113: gi|428308624|ref|YP_007119601.1|

Microcoleus sp. PCC 7113: gi|428308790|ref|YP_007119767.1|

Microcoleus sp. PCC 7113: gi|428311573|ref|YP_007122550.1|

Synechococcus sp. PCC 7502: gi|428221826|ref|YP_007105996.1|