SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,55486,89260,89260,89260,89260,89260,89260,89260,89260,_gap_ superfamilies in all Eubacterial genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55486 - Metalloproteases ("zincins"), catalytic domain
89260 - Collagen-binding domain
89260 - Collagen-binding domain
89260 - Collagen-binding domain
89260 - Collagen-binding domain
89260 - Collagen-binding domain
89260 - Collagen-binding domain
89260 - Collagen-binding domain
89260 - Collagen-binding domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

2 sequences contain the _gap_,55486,89260,89260,89260,89260,89260,89260,89260,89260,_gap_ domain architecture in Eubacteria.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Chloroflexus aurantiacus J-10-fl: gi|163848803|ref|YP_001636847.1|

Chloroflexus sp. Y-400-fl: gi|222526756|ref|YP_002571227.1|