SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,55785,55781,55785,47384,55874 superfamilies in all Eubacterial genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain)
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

8 sequences contain the _gap_,55785,55781,55785,47384,55874 domain architecture in Eubacteria.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Hyphomicrobium denitrificans ATCC 51888: gi|300022255|ref|YP_003754866.1|

Magnetospirillum magneticum AMB-1: gi|83312823|ref|YP_423087.1|

Myxococcus fulvus HW-1: gi|338530819|ref|YP_004664153.1|

Myxococcus xanthus DK 1622: gi|108758532|ref|YP_628880.1|

Corallococcus coralloides DSM 2259: gi|383452545|ref|YP_005366534.1|

Candidatus Solibacter usitatus Ellin6076: gi|116626591|ref|YP_828747.1|

Calothrix sp. PCC 7507: gi|427716872|ref|YP_007064866.1|

Microcoleus sp. PCC 7113: gi|428308982|ref|YP_007119959.1|