SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,56112,48452 superfamilies in all Eubacterial genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

56112 - Protein kinase-like (PK-like)
48452 - TPR-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

80 sequences contain the _gap_,56112,48452 domain architecture in Eubacteria.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Methylomicrobium alcaliphilum: gi|357405313|ref|YP_004917237.1|

Cellvibrio japonicus Ueda107: gi|192360923|ref|YP_001981362.1|

Myxococcus fulvus HW-1: gi|338536249|ref|YP_004669583.1|

Myxococcus xanthus DK 1622: gi|108763617|ref|YP_631880.1|

Corallococcus coralloides DSM 2259: gi|383453631|ref|YP_005367620.1|

Corallococcus coralloides DSM 2259: gi|383453632|ref|YP_005367621.1|

Corallococcus coralloides DSM 2259: gi|383453633|ref|YP_005367622.1|

Corallococcus coralloides DSM 2259: gi|383453634|ref|YP_005367623.1|

Corallococcus coralloides DSM 2259: gi|383454209|ref|YP_005368198.1|

Stigmatella aurantiaca DW4/3-1: gi|310820894|ref|YP_003953252.1|

Anaeromyxobacter sp. Fw109-5: gi|153004413|ref|YP_001378738.1|

Haliangium ochraceum DSM 14365: gi|262195112|ref|YP_003266321.1|

Desulfatibacillum alkenivorans AK-01: gi|218780542|ref|YP_002431860.1|

Candidatus Koribacter versatilis Ellin345: gi|94968483|ref|YP_590531.1|

Candidatus Chloracidobacterium thermophilum B: gi|347755589|ref|YP_004863153.1|

Candidatus Chloracidobacterium thermophilum B: gi|347753982|ref|YP_004861546.1|

Opitutus terrae PB90-1: gi|182413208|ref|YP_001818274.1|

Planctomyces limnophilus DSM 3776: gi|296123092|ref|YP_003630870.1|

Planctomyces brasiliensis DSM 5305: gi|325107041|ref|YP_004268109.1|

Gemmatimonas aurantiaca T-27: gi|226228375|ref|YP_002762481.1|

Clostridium acetobutylicum ATCC 824: gi|15893695|ref|NP_347044.1|

Clostridium cellulovorans 743B: gi|302875480|ref|YP_003844113.1|

Roseiflexus castenholzii DSM 13941: gi|156740399|ref|YP_001430528.1|

Herpetosiphon aurantiacus DSM 785: gi|159900002|ref|YP_001546249.1|

[Cellvibrio] gilvus ATCC 13127: gi|336320645|ref|YP_004600613.1|

Cellulomonas flavigena DSM 20109: gi|296130896|ref|YP_003638146.1|

Intrasporangium calvum DSM 43043: gi|317123705|ref|YP_004097817.1|

Mycobacterium marinum M: gi|183980736|ref|YP_001849027.1|

Mycobacterium chubuense NBB4: gi|392414369|ref|YP_006450974.1|

Mycobacterium gilvum PYR-GCK: gi|145220807|ref|YP_001131485.1|

Mycobacterium ulcerans Agy99: gi|118618244|ref|YP_906576.1|

Mycobacterium rhodesiae NBB3: gi|375138456|ref|YP_004999105.1|

Mycobacterium bovis BCG str. Pasteur 1173P2: gi|121636324|ref|YP_976547.1|

Mycobacterium tuberculosis: gi|479054349|ref|YP_007350155.1|

Mycobacterium tuberculosis KZN 1435: gi|253797333|ref|YP_003030334.1|

Mycobacterium africanum GM041182: gi|339630479|ref|YP_004722121.1|

Mycobacterium canettii CIPT 140010059: gi|340625435|ref|YP_004743887.1|

Mycobacterium avium 104: gi|118463342|ref|YP_883878.1|

Mycobacterium intracellulare ATCC 13950: gi|379749355|ref|YP_005340176.1|

Mycobacterium sp. JLS: gi|126433142|ref|YP_001068833.1|

Mycobacterium abscessus ATCC 19977: gi|169631302|ref|YP_001704951.1|

Mycobacterium massiliense str. GO 06: gi|397680551|ref|YP_006522086.1|

Nocardia farcinica IFM 10152: gi|54027318|ref|YP_121560.1|

Rhodococcus erythropolis PR4: gi|226304963|ref|YP_002764921.1|

Segniliparus rotundus DSM 44985: gi|296392569|ref|YP_003657453.1|

Actinoplanes missouriensis 431: gi|383780499|ref|YP_005465065.1|

Actinoplanes sp. SE50/110: gi|386850150|ref|YP_006268163.1|

Actinoplanes sp. N902-109: gi|494687457|ref|YP_007953031.1|

Microlunatus phosphovorus NM-1: gi|336118851|ref|YP_004573623.1|

Kribbella flavida DSM 17836: gi|284033846|ref|YP_003383777.1|

Amycolatopsis mediterranei U32: gi|300787705|ref|YP_003767996.1|

Amycolatopsis mediterranei U32: gi|300790108|ref|YP_003770399.1|

Saccharomonospora viridis DSM 43017: gi|257057661|ref|YP_003135493.1|

Actinosynnema mirum DSM 43827: gi|256376654|ref|YP_003100314.1|

Streptomyces hygroscopicus subsp. jinggangensis 5008: gi|386843329|ref|YP_006248387.1|

Streptomyces scabiei 87.22: gi|290960315|ref|YP_003491497.1|

Streptomyces cattleya NRRL 8057 = DSM 46488: gi|386355419|ref|YP_006053665.1|

Streptomyces avermitilis MA-4680: gi|29831918|ref|NP_826552.1|

Streptomyces violaceusniger Tu 4113: gi|345015203|ref|YP_004817557.1|

Streptomyces bingchenggensis BCW-1: gi|374989109|ref|YP_004964604.1|

Streptomyces bingchenggensis BCW-1: gi|374989821|ref|YP_004965316.1|

Streptomyces griseus subsp. griseus NBRC 13350: gi|182438658|ref|YP_001826377.1|

Streptomyces sp. SirexAA-E: gi|344999679|ref|YP_004802533.1|

Streptomyces flavogriseus ATCC 33331: gi|357413405|ref|YP_004925141.1|

Streptomyces sp. PAMC26508: gi|479319416|ref|YP_007859467.1|

Streptomyces coelicolor A3(2): gi|21221122|ref|NP_626901.1|

Kitasatospora setae KM-6054: gi|357392358|ref|YP_004907199.1|

Thermomonospora curvata DSM 43183: gi|269124454|ref|YP_003297824.1|

Thermomonospora curvata DSM 43183: gi|269124667|ref|YP_003298037.1|

Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111: gi|297563326|ref|YP_003682300.1|

Frankia alni ACN14a: gi|111223302|ref|YP_714096.1|

Frankia alni ACN14a: gi|111223728|ref|YP_714522.1|

Frankia sp. EAN1pec: gi|158314292|ref|YP_001506800.1|

Frankia sp. EAN1pec: gi|158316706|ref|YP_001509214.1|

Frankia symbiont of Datisca glomerata: gi|336178707|ref|YP_004584082.1|

Stackebrandtia nassauensis DSM 44728: gi|291302014|ref|YP_003513292.1|

Catenulispora acidiphila DSM 44928: gi|256391357|ref|YP_003112921.1|

Anabaena variabilis ATCC 29413: gi|75812660|ref|YP_320278.1|

Microcystis aeruginosa NIES-843: gi|166366822|ref|YP_001659095.1|

Leptolyngbya sp. PCC 7376: gi|427723427|ref|YP_007070704.1|