SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for 55486,49899,49599,_gap_,57196,_gap_ superfamilies in all Eukaryotic genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55486 - Metalloproteases ("zincins"), catalytic domain
49899 - Concanavalin A-like lectins/glucanases
49599 - TRAF domain-like
57196 - EGF/Laminin

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

9 sequences contain the 55486,49899,49599,_gap_,57196,_gap_ domain architecture in Eukaryotes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Ficedula albicollis 76_1.0: ENSFALP00000006173

Danio rerio 76_9: ENSDARP00000076528

Gasterosteus aculeatus 76_1: ENSGACP00000005679

Gasterosteus aculeatus 76_1: ENSGACP00000005687

Oryzias latipes 76_1: ENSORLP00000019514

Oryzias latipes 76_1: ENSORLP00000019515

Monodelphis domestica 76_5: ENSMODP00000039980

Tetraodon nigroviridis 76_8: ENSTNIP00000022374

Poecilia formosa 76: ENSPFOP00000000487