SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,47095,_gap_,47095 superfamilies in all Eukaryotic genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47095 - HMG-box
47095 - HMG-box

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

122 sequences contain the _gap_,47095,_gap_,47095 domain architecture in Eukaryotes.

Remove higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Oryza glumaepatula 22: OGLUM02G11100.1

Phaseolus vulgaris v186: Phvulv091020669m|PACid:23530718

Aquilegia coerulea v195: Aquca_013_00142.1|PACid:22060239

Oryza sativa v193: LOC_Os02g15810.1|PACid:21920310

Adineta vaga: GSADVT00000496001

Adineta vaga: GSADVT00051379001

Brachypodium distachyon : EG:BRADI3G09690.1

Brassica rapa Chiifu-401 1.2: Bra013731

Callithrix jacchus 76_3.2.1: ENSCJAP00000018627

Cucumis sativus v122: Cucsa.107270.2|PACid:16959576

Cucumis sativus v122: Cucsa.107270.1|PACid:16959575

Citrus clementina v165: clementine0.9_030321m|PACid:19277322

Citrus sinensis v154: orange1.1g017939m|PACid:18119025

Drosophila suzukii: DS10_00004040

Eucalyptus grandis v201: Eucgr.E00847.1|PACid:23577572

Physcomitrella patens subsp. patens 22: PP1S2_357V6.1

Physcomitrella patens subsp. patens 22: PP1S61_4V6.1

Physcomitrella patens subsp. patens 22: PP1S61_4V6.2

Oryza brachyantha 22: OB02G19930.1

Panicum virgatum v202: Pavirv00051188m|PACid:23798067

Panicum virgatum v202: Pavirv00053161m|PACid:23816637

Manihot esculenta v147: cassava4.1_029090m|PACid:17971023

Musa balbisiana: ITC1587_Bchr10_P30199

Oryza barthii 22: OBART02G11160.1

Aegilops tauschii 22: EMT05540

Prunus persica v139: ppa004611m|PACid:17662000

Phyllostachys heterocyclavar. pubescens: PH01001955G0160

Oryza meridionalis 22: OMERI02G11730.1

Setaria italica v164: Si017040m|PACid:19687060

Symbiodinium minutum clade B1 v1.2: symbB.v1.2.034196.t1|scaffold4374.1|size40529|3

Symbiodinium minutum clade B1 v1.2: symbB.v1.2.010994.t1|scaffold725.1|size168906|20

Theobroma cacao B97-61/B2 v1: Tc03_g028600

Thecamonas trahens ATCC 50062 : AMSG_03006T0

Triticum aestivum 22: Traes_2AL_72F4E1905.1

Oryza nivara 22: ONIVA02G12490.1

Linum usitatissimum v200: Lus10003904|PACid:23144347

Linum usitatissimum v200: Lus10001909|PACid:23157104

Linum usitatissimum v200: Lus10032379|PACid:23168660

Arabidopsis thaliana 10: AT4G23800.2

Arabidopsis thaliana 10: AT4G23800.1

Arabidopsis thaliana 10: AT4G11080.1

Aedes aegypti 55: AAEL007882-PB

Aedes aegypti 55: AAEL007882-PA

Malus domestica v196: MDP0000268093|PACid:22677777

Daphnia pulex : jgi|Dappu1|114234|fgenesh1_pg.C_scaffold_126000012

Daphnia pulex : jgi|Dappu1|221844|estExt_fgenesh1_pg.C_60467

Daphnia pulex : jgi|Dappu1|303621|PASA_GEN_22100001

Canis familiaris 76_3.1: ENSCAFP00000021044

Zea mays v181: GRMZM2G060253_T01|PACid:20879923

Equus caballus 76_2: ENSECAP00000003819

Phanerochaete chrysosporium RP-78 2.1: jgi|Phchr1|1556|fgenesh1_pg.C_scaffold_2000534

Selaginella moellendorffii : jgi|Selmo1|144662|estExt_Genewise1.C_81101

Selaginella moellendorffii : jgi|Selmo1|73858|e_gw1.0.2233.1

Chlorella variabilis sp. NC64A : jgi|ChlNC64A_1|145197|IGS.gm_9_00004

Homo sapiens 76_38: ENSP00000345297

Homo sapiens 76_38: ENSP00000377231

Homo sapiens 76_38: ENSP00000432925

Homo sapiens 76_38: ENSP00000437180

Homo sapiens 76_38: ENSP00000431539

Bigelowiella natans CCMP2755 22: JGI_V11_70028

Oryza punctata 22: OPUNC02G09900.1

Thellungiella halophila v173: Thhalv10025168m|PACid:20192975

Thellungiella halophila v173: Thhalv10028648m|PACid:20197553

Arabidopsis lyrata : jgi|Araly1|489947|fgenesh2_kg.6__3081__AT4G11080.1

Myotis lucifugus 76_2.0: ENSMLUP00000004375

Myotis lucifugus 76_2.0: ENSMLUP00000021894

Strigamia maritima 22: SMAR006590-PA

Strigamia maritima 22: SMAR006591-PA

Strigamia maritima 22: SMAR006793-PA

Mus musculus 76_38: ENSMUSP00000006754

Mus musculus 76_38: ENSMUSP00000102732

Mus musculus 76_38: ENSMUSP00000102734

Mus musculus 76_38: ENSMUSP00000102736

Mus musculus 76_38: ENSMUSP00000136310

Mus musculus 76_38: ENSMUSP00000096572

Mus musculus 76_38: ENSMUSP00000126540

Mus musculus 76_38: ENSMUSP00000129611

Medicago truncatula : Medtr8g099305.1

Neurospora tetrasperma : jgi|Neute1|161292|estExt_fgenesh1_pg.C_760012

Trichoderma virens Gv29-8 : jgi|Trive1|60622|fgenesh1_pg.C_scaffold_1000607

Neurospora crassa OR74A : NCU00833T0

Pongo abelii 76_2: ENSPPYP00000023584

Pongo abelii 76_2: ENSPPYP00000004303

Sorghum bicolor : jgi|Sorbi1|5037959|Sb04g009610

Oryctolagus cuniculus 76_2: ENSOCUP00000009060

Oryza sativa ssp. japonica 5.0: LOC_Os02g15810.1|13102.m01762|protein

Capsella rubella v183: Carubv10007590m|PACid:20896517

Capsella rubella v183: Carubv10000930m|PACid:20909701

Gossypium raimondii v221: Gorai.007G025500.2|PACid:26785780

Gossypium raimondii v221: Gorai.007G025500.1|PACid:26785779

Gossypium raimondii v221: Gorai.007G025500.3|PACid:26785781

Solanum tuberosum : PGSC0003DMP400021366

Solanum tuberosum : PGSC0003DMP400021766

Solanum tuberosum : PGSC0003DMP400021765

Populus trichocarpa v156: POPTR_0001s10410.1|PACid:18235028

Populus trichocarpa v156: POPTR_0003s13780.1|PACid:18216576

Physcomitrella patens: jgi|Phypa1_1|54994|fgenesh1_pm.scaffold_2000035

Physcomitrella patens: jgi|Phypa1_1|210318|estExt_Genewise1.C_610004

Carica papaya : evm.TU.supercontig_122.37

Amborella trichopoda 22: ERM98786

Rattus norvegicus 76_5.0: ENSRNOP00000044305

Macaca mulatta 76_1: ENSMMUP00000013370

Rhizomucor miehei CAU432 : RhzM08618

Musa acuminata 22: GSMUA_Achr10P14500_001

Ovis aries 76_3.1: ENSOARP00000008107

Tribolium castaneum 3.0: TC004728

Takifugu rubripes 76_4: ENSTRUP00000023943

Toxoplasma gondii ME49: gb|TGME49_003950

Toxoplasma gondii GT1: gb|TGGT1_016760

Neospora caninum: psu|NCLIV_021140

Toxoplasma gondii VEG: gb|TGVEG_045260

Poecilia formosa 76: ENSPFOP00000010835

Pteropus vampyrus 76_1: ENSPVAP00000013055

Vitis vinifera : GSVIVT01019504001

Oikopleura dioica: GSOIDT00005866001

Fragaria vesca : gene32050

Phaeodactylum tricornutumCCAP 1055/1: jgi|Phatr2|44432|estExt_fgenesh1_pg.C_chr_40218

Phaeodactylum tricornutumCCAP 1055/1: jgi|Phatr2|49937|estExt_fgenesh1_pg.C_chr_250139

Glycine max v109: Glyma05g37010.1|PACid:16260971

Glycine max v109: Glyma08g02550.1|PACid:16269709

Solanum lycopersicum v.2.3: Solyc08g082070.2.1

Zea mays subsp. mays : GRMZM2G060253_P01