SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,47353,_gap_,109640,_gap_,57667,57667,_gap_,57667 superfamilies in all Eukaryotic genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47353 - Retrovirus capsid dimerization domain-like
109640 - KRAB domain (Kruppel-associated box)
57667 - beta-beta-alpha zinc fingers
57667 - beta-beta-alpha zinc fingers
57667 - beta-beta-alpha zinc fingers

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

19 sequences contain the _gap_,47353,_gap_,109640,_gap_,57667,57667,_gap_,57667 domain architecture in Eukaryotes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Callithrix jacchus 76_3.2.1: ENSCJAP00000021670

Mustela putorius furo 76_1.0: ENSMPUP00000015015

Sus scrofa 76_10.2: ENSSSCP00000014819

Dasypus novemcinctus 76_2: ENSDNOP00000025330

Canis familiaris 76_3.1: ENSCAFP00000015692

Ictidomys tridecemlineatus 76_2: ENSSTOP00000019225

Gorilla gorilla 76_3.1: ENSGGOP00000021029

Papio anubis 76: ENSPANP00000001379

Homo sapiens 76_38: ENSP00000294753

Loxodonta africana 76_3: ENSLAFP00000010875

Myotis lucifugus 76_2.0: ENSMLUP00000018222

Mus musculus 76_38: ENSMUSP00000013262

Pongo abelii 76_2: ENSPPYP00000000035

Monodelphis domestica 76_5: ENSMODP00000010936

Rattus norvegicus 76_5.0: ENSRNOP00000055109

Macaca mulatta 76_1: ENSMMUP00000025725

Macaca mulatta 76_1: ENSMMUP00000025726

Ovis aries 76_3.1: ENSOARP00000008056

Pan troglodytes 76_2.1.4: ENSPTRP00000003726