Domain combinations for _gap_,47676,_gap_,90229 superfamilies in all Eukaryotic genomes
The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:
47676 - Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
90229 - CCCH zinc finger
Phylogenetic distribution
Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.
Domain combination graphics and links
108 sequences contain the _gap_,47676,_gap_,90229 domain architecture in Eukaryotes.
Add higher domain architectures which include the chosen architecture.
Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.
Astyanax mexicanus 76: ENSAMXP00000012166
Agaricus bisporus var. bisporus : jgi|Agabi_varbisH97_2|191644|estExt_fgenesh2_kg.C_40059
Acromyrmex echinatior v3.8: Aech_08770
Callithrix jacchus 76_3.2.1: ENSCJAP00000037137
Callithrix jacchus 76_3.2.1: ENSCJAP00000037131
Drosophila suzukii: DS10_00000097
Echinococcus granulosus : EgrG_000247700.1
Aspergillus versicolor v1.0: jgi|Aspve1|81376|gm1.3844_g
Heterocephalus glaber v1.7-2: HGL_M00000084461
Aspergillus sydowii v1.0: jgi|Aspsy1|147711|e_gw1.3.1279.1
Heliconius melpomene : HMEL002249-PA
Hymenolepis microstoma : HmN_000748100.1
Scleroderma citrinum Foug A v1.0: jgi|Sclci1|1216555|fgenesh1_kg.55_#_109_#_Locus2560v1rpkm59.63
Aspergillus glaucus: jgi|Aspgl1|69702|fgenesh1_pm.26_#_67
Mustela putorius furo 76_1.0: ENSMPUP00000011680
Piloderma croceum F 1598 v1.0: jgi|Pilcr1|819050|fgenesh1_kg.00020_#_268_#_Locus3392v1rpkm62.58
Nomascus leucogenys 76_1.0: ENSNLEP00000006308
Nomascus leucogenys 76_1.0: ENSNLEP00000023223
Oreochromis niloticus 76_1.0: ENSONIP00000020077
Ailuropoda melanoleuca 76_1: ENSAMEP00000014026
Pleurotus ostreatus : jgi|PleosPC15_1|173322|estExt_genemark.C_40277
Pelodiscus sinensis 76_1.0: ENSPSIP00000011089
Aspergillus zonatus v1.0: jgi|Aspzo1|18609|gm1.7302_g
Serpula lacrymans var. lacrymans S7.9 : jgi|Serla_S7_9|446355|estExt_fgenesh2_pm.C_40079
Sus scrofa 76_10.2: ENSSSCP00000001421
Sus scrofa 76_10.2: ENSSSCP00000030807
Sarcoptes scabiei: SSCA003587-PA
Sarcophilus harrisii 76_7.0: ENSSHAP00000007462
Taenia solium : TsM_000823500;OldName=maker_32552
Crassostrea gigas 22: EKC19845
Hebeloma cylindrosporum h7 v2.0: jgi|Hebcy2|440815|fgenesh1_kg.4_#_17_#_Locus3149v1rpkm21.35
Xiphophorus maculatus 76_4.4.2: ENSXMAP00000016758
Aspergillus clavatus NRRL 1 : ACLA_041810
Amanita thiersii Skay4041 v1.0: jgi|Amath1|75551|fgenesh1_pm.33_#_27
Apis mellifera 38.2d: ENSAPMP00000035286
Amanita muscaria Koide v1.0: jgi|Amamu1|159842|fgenesh1_kg.11_#_275_#_Locus2635v1rpkm84.85
Bos taurus 76_3.1: ENSBTAP00000009104
Dasypus novemcinctus 76_2: ENSDNOP00000018220
Hydnomerulius pinastri v2.0: jgi|Hydpi2|122657|estExt_Genewise1Plus.C_1_t50172
Danio rerio 76_9: ENSDARP00000112783
Danio rerio 76_9: ENSDARP00000120235
Danio rerio 76_9: ENSDARP00000043553
Drosophila melanogaster 76_5: FBpp0077687
Drosophila melanogaster 76_5: FBpp0304322
Canis familiaris 76_3.1: ENSCAFP00000039379
Canis familiaris 76_3.1: ENSCAFP00000000590
Drosophila virilis 1.2: FBpp0232219
Drosophila sechellia 1.3: FBpp0198253
Naegleria gruberi : jgi|Naegr1|81490|estExt_fgeneshNG_pg.C_600121
Erinaceus europaeus 76: ENSEEUP00000012719
Equus caballus 76_2: ENSECAP00000008420
Felis catus 76_6.2: ENSFCAP00000007116
Paxillus rubicundulus Ve08.2h10 v1.0: jgi|Paxru1|824166|fgenesh1_kg.82_#_5_#_Locus2888v1rpkm59.20
Ictidomys tridecemlineatus 76_2: ENSSTOP00000010624
Drosophila grimshawi 1.3: FBpp0145156
Cavia porcellus 76_3: ENSCPOP00000013885
Gorilla gorilla 76_3.1: ENSGGOP00000011026
Gorilla gorilla 76_3.1: ENSGGOP00000025962
Lottia gigantea : jgi|Lotgi1|230041|estExt_fgenesh2_pg.C_sca_100267
Chlorella variabilis sp. NC64A : jgi|ChlNC64A_1|55078|fgenesh3_pg.C_scaffold_29000030
Papio anubis 76: ENSPANP00000013945
Papio anubis 76: ENSPANP00000013946
Homo sapiens 76_38: ENSP00000365694
Homo sapiens 76_38: ENSP00000373080
Homo sapiens 76_38: ENSP00000389299
Homo sapiens 76_38: ENSP00000407181
Homo sapiens 76_38: ENSP00000407310
Homo sapiens 76_38: ENSP00000413554
Homo sapiens 76_38: ENSP00000416060
Schistosoma mansoni : Smp_034980.1
Schistosoma mansoni : Smp_034980.2
Dipodomys ordii 76_1: ENSDORP00000002991
Loxodonta africana 76_3: ENSLAFP00000014487
Laccaria bicolor S238N-H82 : jgi|Lacbi1|294913|estExt_fgenesh2_pg.C_250041
Myotis lucifugus 76_2.0: ENSMLUP00000008046
Echinococcus multilocularis : EmuJ_000247700.1
Mus musculus 76_38: ENSMUSP00000084460
Mus musculus 76_38: ENSMUSP00000084461
Anolis carolinensis 76_2.0: ENSACAP00000010548
Aspergillus tubingensis v1.0: jgi|Asptu1|196447|gm1.10638_g
Otolemur garnettii 76_3: ENSOGAP00000003959
Pongo abelii 76_2: ENSPPYP00000018346
Oryzias latipes 76_1: ENSORLP00000013212
Monodelphis domestica 76_5: ENSMODP00000019894
Coniophora puteana: jgi|Conpu1|136708|estExt_fgenesh1_pm.C_5_t10232
Dichomitus squalens: jgi|Dicsq1|154288|estExt_fgenesh1_pm.C_80314
Gloeophyllum trabeumv1.0: jgi|Glotr1_1|119702|estExt_fgenesh1_pg.C_00002_t20156
Punctularia strigosozonata v1.0: jgi|Punst1|125152|estExt_fgenesh1_pg.C_4_t10026
Aspergillus brasiliensis v1.0: jgi|Aspbr1|130984|e_gw1.10.375.1
Trametes versicolor v1.0: jgi|Trave1|70389|estExt_Genemark1.C_3_t30113
Hydra vulgaris: gi|449666366|ref|XP_002160168.2|
Wolfiporia cocos MD-104 SS10 v1.0: jgi|Wolco1|137458|estExt_fgenesh1_kg.C_4_t20121
Rattus norvegicus 76_5.0: ENSRNOP00000001053
Macaca mulatta 76_1: ENSMMUP00000008589
Ovis aries 76_3.1: ENSOARP00000013718
Takifugu rubripes 76_4: ENSTRUP00000036625
Takifugu rubripes 76_4: ENSTRUP00000036626
Tursiops truncatus 76_1: ENSTTRP00000007870
Poecilia formosa 76: ENSPFOP00000016556
Aspergillus acidus v1.0: jgi|Aspfo1|143728|e_gw1.13.500.1
Procavia capensis 76_1: ENSPCAP00000015929
Pteropus vampyrus 76_1: ENSPVAP00000003765
Emiliania huxleyi CCMP1516 : jgi|Emihu1|434188|estExtDG_fgenesh_newKGs_kg.C_170066
Pan troglodytes 76_2.1.4: ENSPTRP00000030588
Sorex araneus 76_1: ENSSARP00000002531
Camponotus floridanus v3.3: Cflo_10981--XP_395559.3_APIME
Harpegnathos saltator v3.3: Hsal_09421--XP_395559.3_APIME
Linepithema humile v1.1: LH21692-PA
|
