SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for _gap_,52833,54236 superfamilies in all Eukaryotic genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52833 - Thioredoxin-like
54236 - Ubiquitin-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

41 sequences contain the _gap_,52833,54236 domain architecture in Eukaryotes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Oryza glumaepatula 22: OGLUM07G09730.1

Metschnikowia bicuspidata NRRL YB-4993 v1.0: jgi|Metbi1|76422|fgenesh1_pm.1_#_554

Metschnikowia bicuspidata NRRL YB-4993 v1.0: jgi|Metbi1|45295|e_gw1.5.159.1

Actinidia chinensis Hongyang : Achn110541

Brachypodium distachyon : EG:BRADI3G49920.1

Citrus clementina v165: clementine0.9_032720m|PACid:19255838

Panicum virgatum v202: Pavirv00000408m|PACid:23809559

Oryza barthii 22: OBART07G10760.1

Aegilops tauschii 22: EMT25783

Pichia pastoris GS115 : gi|254570839|ref|XP_002492529.1|

Oryza meridionalis 22: OMERI07G09190.1

Setaria italica v164: Si033030m|PACid:19711939

Hyphopichia burtonii NRRL Y-1933 v1.0: jgi|Hypbu1|153352|fgenesh1_kg.5_#_150_#_Locus3249v1rpkm34.03

Thecamonas trahens ATCC 50062 : AMSG_05541T0

Linum usitatissimum v200: Lus10003214|PACid:23155735

Arabidopsis thaliana 10: AT1G59550.1

Daphnia pulex : jgi|Dappu1|335122|NCBI_GNO_50700004

Zea mays v181: GRMZM2G343688_T01|PACid:20867436

Plasmodium knowlesi strain H : PKH_073280

Candida glabrata CBS138: gnl|GLV|CAGL0L07128g

Ashbya gossypii ATCC 10895 : tr|Q759K1|Q759K1_ASHGO

Cavia porcellus 76_3: ENSCPOP00000008363

Drosophila willistoni 1.3: FBpp0244844

Candida lusitaniae ATCC 42720 : CLUT_03870

Oryza punctata 22: OPUNC07G09710.1

Kluyveromyces lactis: gnl|GLV|KLLA0F07139g

Arabidopsis lyrata : jgi|Araly1|876033|Al_scaffold_0002_627

Candida guilliermondii ATCC 6260 : PGUT_03112

Babesia bovis T2Bo : gi|154796547|gb|EDO05728.1|

Babesia bovis T2Bo : gi|156083625|ref|XP_001609296.1|

Plasmodium falciparum 3D7 : PFI1680w

Hansenula polymorpha v2.0: jgi|Hanpo2|96818|estExt_Genewise1Plus2.C_1_t20215

Pichia membranifaciensv1.0: jgi|Picme1|37935|gm1.1779_g

Trichomonas vaginalis : 81869.m00147

Emiliania huxleyi CCMP1516 : jgi|Emihu1|201263|gm1.1300436

Saccharomyces cerevisiae 76: YDL091C

Saccharomyces bayanus MIT: ORFP:3896

Saccharomyces mikatae MIT: ORFP:2894

Saccharomyces paradoxus MIT: ORFP:3429

Zygosaccharomyces rouxii : gnl|GLV|ZYRO0A07876g

Zea mays subsp. mays : GRMZM2G343688_P01