SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,54585,_gap_,57850 superfamilies in all Eukaryotic genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54585 - Cdc48 domain 2-like
57850 - RING/U-box

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

18 sequences contain the _gap_,54585,_gap_,57850 domain architecture in Eukaryotes.

Remove higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Symbiodinium minutum clade B1 v1.2: symbB.v1.2.004918.t1|scaffold263.1|size248082|19

Symbiodinium minutum clade B1 v1.2: symbB.v1.2.031240.t1|scaffold3604.1|size53860|3

Cryptosporidium parvum Iowa II: gb|cgd1_1950

Plasmodium berghei ANKA : PBANKA_120550

Plasmodium knowlesi strain H : PKH_080600

Plasmodium chabaudi : PCAS_120620

Babesia bovis T2Bo : gi|154796127|gb|EDO05309.1|

Babesia bovis T2Bo : gi|156082786|ref|XP_001608877.1|

Plasmodium falciparum 3D7 : PF10_0072

Theileria parva : 530.m03064

Plasmodium yoelii ssp. yoelii 1 : 2.m00102|PY00003|PY00003|hypothetical

Cryptosporidium hominis: Chro.10224

Cryptosporidium muris: gb|CMU_028700

Toxoplasma gondii ME49: gb|TGME49_091030

Toxoplasma gondii GT1: gb|TGGT1_032090

Neospora caninum: psu|NCLIV_042900

Toxoplasma gondii VEG: gb|TGVEG_084440

Plasmodium vivax SaI-1 7.0: gb|PVX_094560