SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,54928,_gap_,100939 superfamilies in all Eukaryotic genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54928 - RNA-binding domain, RBD
100939 - SPOC domain-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

296 sequences contain the _gap_,54928,_gap_,100939 domain architecture in Eukaryotes.

Remove higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Lepisosteus oculatus 76: ENSLOCP00000009591

Lepisosteus oculatus 76: ENSLOCP00000009605

Lepisosteus oculatus 76: ENSLOCP00000016533

Lepisosteus oculatus 76: ENSLOCP00000022043

Anas platyrhynchos 76_1.0: ENSAPLP00000012411

Anas platyrhynchos 76_1.0: ENSAPLP00000015300

Astyanax mexicanus 76: ENSAMXP00000008727

Astyanax mexicanus 76: ENSAMXP00000012831

Astyanax mexicanus 76: ENSAMXP00000026510

Astyanax mexicanus 76: ENSAMXP00000026808

Acropora digitifera v1.0: adi_v1.10220

Acropora digitifera v1.0: adi_v1.15030

Acromyrmex echinatior v3.8: Aech_00704

Acromyrmex echinatior v3.8: Aech_06111

Adineta vaga: GSADVT00043458001

Adineta vaga: GSADVT00043778001

Adineta vaga: GSADVT00049449001

Brachypodium distachyon : EG:BRADI2G50890.1

Callithrix jacchus 76_3.2.1: ENSCJAP00000046060

Callithrix jacchus 76_3.2.1: ENSCJAP00000006209

Callithrix jacchus 76_3.2.1: ENSCJAP00000006205

Callithrix jacchus 76_3.2.1: ENSCJAP00000048925

Callithrix jacchus 76_3.2.1: ENSCJAP00000010095

Callithrix jacchus 76_3.2.1: ENSCJAP00000052235

Gadus morhua 76_1: ENSGMOP00000008732

Gadus morhua 76_1: ENSGMOP00000008988

Gadus morhua 76_1: ENSGMOP00000016815

Megaselia scalaris 22: MESCA004176-PA

Danaus plexippus OGS1.0: DPGLEAN16440-PA

Drosophila suzukii: DS10_00006686

Echinococcus granulosus : EgrG_000725400.1

Echinococcus granulosus : EgrG_000745400.1

Echinococcus granulosus : EgrG_000747200.1

Echinococcus granulosus : EgrG_000116000.1

Choloepus hoffmanni 76_1: ENSCHOP00000008113

Heterocephalus glaber v1.7-2: HGL_H00000358799

Heterocephalus glaber v1.7-2: HGL_H00000313890-1

Heterocephalus glaber v1.7-2: HGL_H00000313890-2

Heterocephalus glaber v1.7-2: HGL_H00000364912

Heliconius melpomene : HMEL003459-PA

Hymenolepis microstoma : HmN_000827000.1

Hymenolepis microstoma : HmN_000015500.1

Latimeria chalumnae 76_1: ENSLACP00000003657

Latimeria chalumnae 76_1: ENSLACP00000003658

Latimeria chalumnae 76_1: ENSLACP00000018873

Latimeria chalumnae 76_1: ENSLACP00000020910

Latimeria chalumnae 76_1: ENSLACP00000003659

Meleagris gallopavo 76_2: ENSMGAP00000019266

Mnemiopsis leidyi: ML221313a-PA

Mustela putorius furo 76_1.0: ENSMPUP00000003791

Mustela putorius furo 76_1.0: ENSMPUP00000016214

Mustela putorius furo 76_1.0: ENSMPUP00000019212

Nomascus leucogenys 76_1.0: ENSNLEP00000004348

Nomascus leucogenys 76_1.0: ENSNLEP00000024101

Nomascus leucogenys 76_1.0: ENSNLEP00000022433

Oreochromis niloticus 76_1.0: ENSONIP00000003170

Oreochromis niloticus 76_1.0: ENSONIP00000008293

Oreochromis niloticus 76_1.0: ENSONIP00000008294

Oreochromis niloticus 76_1.0: ENSONIP00000023866

Oreochromis niloticus 76_1.0: ENSONIP00000026555

Ailuropoda melanoleuca 76_1: ENSAMEP00000012128

Ailuropoda melanoleuca 76_1: ENSAMEP00000012130

Ailuropoda melanoleuca 76_1: ENSAMEP00000012429

Ailuropoda melanoleuca 76_1: ENSAMEP00000009825

Proterospongia sp. ATCC 50818 : PTSG_07531T0

Ficedula albicollis 76_1.0: ENSFALP00000003187

Ficedula albicollis 76_1.0: ENSFALP00000003703

Ficedula albicollis 76_1.0: ENSFALP00000014961

Pelodiscus sinensis 76_1.0: ENSPSIP00000000575

Pelodiscus sinensis 76_1.0: ENSPSIP00000008829

Saccoglossus kowalevskii v3.0: Sakowv30002192m

Saccoglossus kowalevskii v3.0: Sakowv30025779m

Saccoglossus kowalevskii v3.0: Sakowv30002193m

Sus scrofa 76_10.2: ENSSSCP00000007261

Sus scrofa 76_10.2: ENSSSCP00000012172

Sus scrofa 76_10.2: ENSSSCP00000007262

Sarcoptes scabiei: SSCA000925-PA

Onchocerca volvulus 22: OVOC11175

Thelohanellus kitauei: KII61655

Sarcophilus harrisii 76_7.0: ENSSHAP00000012829

Sarcophilus harrisii 76_7.0: ENSSHAP00000005676

Sarcophilus harrisii 76_7.0: ENSSHAP00000005677

Taenia solium : TsM_001272600;OldName=mk4.002546.01.01.tsolium

Taenia solium : TsM_000413300;OldName=hunter_8808

Taenia solium : TsM_001251600;OldName=EMU_007768.g7145.t7.tsolium

Taenia solium : TsM_000228600;OldName=hunter_14268

Tetranychus urticae : tetur12g02310

Xiphophorus maculatus 76_4.4.2: ENSXMAP00000009075

Xiphophorus maculatus 76_4.4.2: ENSXMAP00000016792

Xiphophorus maculatus 76_4.4.2: ENSXMAP00000020239

Xiphophorus maculatus 76_4.4.2: ENSXMAP00000012208

Xiphophorus maculatus 76_4.4.2: ENSXMAP00000012249

Anopheles gambiae 49_3j: AGAP009990-PA

Anopheles gambiae 49_3j: AGAP005127-PA

Apis mellifera 38.2d: ENSAPMP00000020199

Apis mellifera 38.2d: ENSAPMP00000022455

Apis mellifera 38.2d: ENSAPMP00000010078

Apis mellifera 38.2d: ENSAPMP00000024687

Apis mellifera 38.2d: ENSAPMP00000026934

Apis mellifera 38.2d: ENSAPMP00000034688

Octopus bimaculoides 280: Ocbimv22034606m.p

Bos taurus 76_3.1: ENSBTAP00000051477

Bos taurus 76_3.1: ENSBTAP00000008515

Bos taurus 76_3.1: ENSBTAP00000053545

Bos taurus 76_3.1: ENSBTAP00000024930

Ciona savignyi 76_2.0: ENSCSAVP00000008889

Ciona savignyi 76_2.0: ENSCSAVP00000008890

Caenorhabditis elegans 76_235: F07A11.6a

Caenorhabditis elegans 76_235: F07A11.6b

Caenorhabditis elegans 76_235: F07A11.6c

Caenorhabditis briggsae 2: CBG02844

Dasypus novemcinctus 76_2: ENSDNOP00000028665

Dasypus novemcinctus 76_2: ENSDNOP00000020911

Daphnia pulex : jgi|Dappu1|330660|NCBI_GNO_14500057

Danio rerio 76_9: ENSDARP00000100758

Danio rerio 76_9: ENSDARP00000100192

Danio rerio 76_9: ENSDARP00000098999

Danio rerio 76_9: ENSDARP00000114195

Drosophila melanogaster 76_5: FBpp0087933

Drosophila melanogaster 76_5: FBpp0087934

Canis familiaris 76_3.1: ENSCAFP00000029291

Canis familiaris 76_3.1: ENSCAFP00000015065

Canis familiaris 76_3.1: ENSCAFP00000043147

Drosophila ananassae 1.3: FBpp0116843

Drosophila ananassae 1.3: FBpp0123903

Drosophila pseudoobscura 2.13: FBpp0277680

Drosophila persimilis 1.3: FBpp0175585

Drosophila virilis 1.2: FBpp0234533

Drosophila simulans 1.3: FBpp0208930

Drosophila mojavensis 1.3: FBpp0169663

Drosophila yakuba 1.3: FBpp0264174

Drosophila sechellia 1.3: FBpp0202474

Echinops telfairi 76: ENSETEP00000001995

Echinops telfairi 76: ENSETEP00000006770

Echinops telfairi 76: ENSETEP00000013547

Equus caballus 76_2: ENSECAP00000021076

Equus caballus 76_2: ENSECAP00000006962

Equus caballus 76_2: ENSECAP00000007032

Equus caballus 76_2: ENSECAP00000007043

Felis catus 76_6.2: ENSFCAP00000024261

Felis catus 76_6.2: ENSFCAP00000023857

Felis catus 76_6.2: ENSFCAP00000009438

Ictidomys tridecemlineatus 76_2: ENSSTOP00000023139

Ictidomys tridecemlineatus 76_2: ENSSTOP00000023742

Ictidomys tridecemlineatus 76_2: ENSSTOP00000015525

Gasterosteus aculeatus 76_1: ENSGACP00000001328

Gasterosteus aculeatus 76_1: ENSGACP00000001524

Gasterosteus aculeatus 76_1: ENSGACP00000007070

Gasterosteus aculeatus 76_1: ENSGACP00000010504

Gasterosteus aculeatus 76_1: ENSGACP00000002059

Drosophila grimshawi 1.3: FBpp0154510

Drosophila erecta 1.3: FBpp0141866

Gallus gallus 76_4: ENSGALP00000000545

Gallus gallus 76_4: ENSGALP00000003731

Cavia porcellus 76_3: ENSCPOP00000014398

Cavia porcellus 76_3: ENSCPOP00000012641

Drosophila willistoni 1.3: FBpp0239894

Gorilla gorilla 76_3.1: ENSGGOP00000003592

Gorilla gorilla 76_3.1: ENSGGOP00000011754

Gorilla gorilla 76_3.1: ENSGGOP00000020958

Lottia gigantea : jgi|Lotgi1|224309|estExt_Genewise1Plus.C_sca_1130009

Papio anubis 76: ENSPANP00000005525

Papio anubis 76: ENSPANP00000017864

Papio anubis 76: ENSPANP00000008687

Papio anubis 76: ENSPANP00000010170

Homo sapiens 76_38: ENSP00000454545

Homo sapiens 76_38: ENSP00000364912

Homo sapiens 76_38: ENSP00000358799

Homo sapiens 76_38: ENSP00000483133

Homo sapiens 76_38: ENSP00000473552

Homo sapiens 76_38: ENSP00000473638

Homo sapiens 76_38: ENSP00000480399

Pediculus humanus corporis : vb|PHUM308070-PA|EEB14538.1|conserved

Pediculus humanus corporis : vb|PHUM127440-PA|EEB11613.1|protein

Helobdella robusta : jgi|Helro1|64541

Helobdella robusta : jgi|Helro1|192189

Schistosoma mansoni : Smp_123600

Schistosoma mansoni : Smp_027550.1

Schistosoma mansoni : Smp_027550.2

Schistosoma mansoni : Smp_048160

Schistosoma mansoni : Smp_159350

Capitella sp. I : jgi|Capca1|136516|e_gw1.693.31.1

Culex pipiens quinquefasciatus : CPIJ002280|RNA

Tarsius syrichta 76_1: ENSTSYP00000000097

Tarsius syrichta 76_1: ENSTSYP00000006561

Ixodes scapularis : ISCW021726-PA

Dipodomys ordii 76_1: ENSDORP00000005303

Dipodomys ordii 76_1: ENSDORP00000007791

Loxodonta africana 76_3: ENSLAFP00000003776

Loxodonta africana 76_3: ENSLAFP00000010784

Loxodonta africana 76_3: ENSLAFP00000010597

Loxodonta africana 76_3: ENSLAFP00000029376

Myotis lucifugus 76_2.0: ENSMLUP00000006550

Myotis lucifugus 76_2.0: ENSMLUP00000009294

Strigamia maritima 22: SMAR008455-PA

Echinococcus multilocularis : EmuJ_000725400.1

Echinococcus multilocularis : EmuJ_000747200.1

Echinococcus multilocularis : EmuJ_000745400.1

Echinococcus multilocularis : EmuJ_000116000.1

Mus musculus 76_38: ENSMUSP00000054424

Mus musculus 76_38: ENSMUSP00000101412

Mus musculus 76_38: ENSMUSP00000077925

Mus musculus 76_38: ENSMUSP00000059330

Macropus eugenii 76_1.0: ENSMEUP00000002223

Macropus eugenii 76_1.0: ENSMEUP00000014557

Macropus eugenii 76_1.0: ENSMEUP00000005667

Anolis carolinensis 76_2.0: ENSACAP00000007519

Anolis carolinensis 76_2.0: ENSACAP00000013541

Nematostella vectensis 1.0: jgi|Nemve1|237983|estExt_fgenesh1_pg.C_20269

Nasonia vitripennis : gi|156538809|ref|XP_001607958.1|

Anopheles darlingi 22: ADAR001135-PA

Otolemur garnettii 76_3: ENSOGAP00000008231

Otolemur garnettii 76_3: ENSOGAP00000017035

Pongo abelii 76_2: ENSPPYP00000002129

Pongo abelii 76_2: ENSPPYP00000001221

Pongo abelii 76_2: ENSPPYP00000017595

Oryctolagus cuniculus 76_2: ENSOCUP00000009327

Oryctolagus cuniculus 76_2: ENSOCUP00000002103

Oryctolagus cuniculus 76_2: ENSOCUP00000025763

Oryzias latipes 76_1: ENSORLP00000000534

Oryzias latipes 76_1: ENSORLP00000007792

Oryzias latipes 76_1: ENSORLP00000023046

Oryzias latipes 76_1: ENSORLP00000025014

Bombyx mori : Bmb040206

Monodelphis domestica 76_5: ENSMODP00000031808

Monodelphis domestica 76_5: ENSMODP00000014920

Hydra vulgaris: gi|221116369|ref|XP_002164038.1|

Hydra vulgaris: gi|449671409|ref|XP_002154856.2|

Acyrthosiphon pisum : gi|193690854|ref|XP_001946792.1|

Acyrthosiphon pisum : gi|193587144|ref|XP_001942956.1|

Acyrthosiphon pisum : gi|193676668|ref|XP_001952161.1|

Brugia malayi WS250: Bm10372

Rattus norvegicus 76_5.0: ENSRNOP00000018994

Rattus norvegicus 76_5.0: ENSRNOP00000064073

Rattus norvegicus 76_5.0: ENSRNOP00000043244

Rattus norvegicus 76_5.0: ENSRNOP00000052647

Rattus norvegicus 76_5.0: ENSRNOP00000059120

Trichoplax adhaerens : jgi|Triad1|56787|fgeneshTA2_pg.C_scaffold_5000681

Macaca mulatta 76_1: ENSMMUP00000010529

Macaca mulatta 76_1: ENSMMUP00000019688

Macaca mulatta 76_1: ENSMMUP00000028619

Macaca mulatta 76_1: ENSMMUP00000019686

Macaca mulatta 76_1: ENSMMUP00000005727

Ovis aries 76_3.1: ENSOARP00000020871

Ovis aries 76_3.1: ENSOARP00000009097

Tribolium castaneum 3.0: TC009491

Tribolium castaneum 3.0: TC006356

Tetraodon nigroviridis 76_8: ENSTNIP00000018184

Tetraodon nigroviridis 76_8: ENSTNIP00000017694

Tetraodon nigroviridis 76_8: ENSTNIP00000013837

Tetraodon nigroviridis 76_8: ENSTNIP00000004965

Takifugu rubripes 76_4: ENSTRUP00000002387

Takifugu rubripes 76_4: ENSTRUP00000002388

Takifugu rubripes 76_4: ENSTRUP00000006813

Takifugu rubripes 76_4: ENSTRUP00000019526

Takifugu rubripes 76_4: ENSTRUP00000028075

Strongylocentrotus purpuratus v3.1: SPU_016058

Tupaia belangeri 76: ENSTBEP00000007216

Tupaia belangeri 76: ENSTBEP00000007566

Tupaia belangeri 76: ENSTBEP00000003182

Tursiops truncatus 76_1: ENSTTRP00000001236

Tursiops truncatus 76_1: ENSTTRP00000001348

Poecilia formosa 76: ENSPFOP00000012743

Poecilia formosa 76: ENSPFOP00000014866

Poecilia formosa 76: ENSPFOP00000018074

Poecilia formosa 76: ENSPFOP00000020646

Poecilia formosa 76: ENSPFOP00000014599

Pteropus vampyrus 76_1: ENSPVAP00000003039

Pteropus vampyrus 76_1: ENSPVAP00000013011

Pteropus vampyrus 76_1: ENSPVAP00000006788

Xenopus laevis : gi|147901721|ref|NP_001084762|

Xenopus laevis : gi|47125240|gb|AAH70824|

Xenopus tropicalis 76_4.2: ENSXETP00000004353

Xenopus tropicalis 76_4.2: ENSXETP00000000136

Xenopus tropicalis 76_4.2: ENSXETP00000050001

Pan troglodytes 76_2.1.4: ENSPTRP00000025846

Pan troglodytes 76_2.1.4: ENSPTRP00000001864

Pan troglodytes 76_2.1.4: ENSPTRP00000000386

Sorex araneus 76_1: ENSSARP00000000328

Rhodnius prolixus 22: RPRC012826-PA

Amphimedon queenslandica: Aqu1.217771|PACid:15716299

Amphimedon queenslandica: Aqu1.230129|PACid:15728657

Atta cephalotes v1.1: AC01259-PA

Atta cephalotes v1.1: AC10837-PA

Camponotus floridanus v3.3: Cflo_05850--XP_624844.2_APIME

Camponotus floridanus v3.3: Cflo_03309--XP_395705.3_APIME

Taeniopygia guttata 76_3.2.4: ENSTGUP00000000910

Taeniopygia guttata 76_3.2.4: ENSTGUP00000004988

Harpegnathos saltator v3.3: Hsal_08650--XP_624844.2_APIME

Harpegnathos saltator v3.3: Hsal_08531--XP_395705.3_APIME

Spizellomyces punctatus DAOM BR117 : SPPG_06700T0

Pogonomyrmex barbatus v1.2: PB20223-RA

Pogonomyrmex barbatus v1.2: PB17271-RA

Linepithema humile v1.1: LH17607-PA

Linepithema humile v1.1: LH22375-PA

Solenopsis invicta v.2.2.3: SI2.2.0_11524