SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for _gap_,47031,50729,109880,109885,109885,109885,47220,47220,109885,_gap_,47220,47220,_gap_,109885,_gap_ superfamilies

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47031 - Second domain of FERM
50729 - PH domain-like
109880 - A middle domain of Talin 1
109885 - I/LWEQ domain
109885 - I/LWEQ domain
109885 - I/LWEQ domain
47220 - alpha-catenin/vinculin-like
47220 - alpha-catenin/vinculin-like
109885 - I/LWEQ domain
47220 - alpha-catenin/vinculin-like
47220 - alpha-catenin/vinculin-like
109885 - I/LWEQ domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

8 sequences contain the _gap_,47031,50729,109880,109885,109885,109885,47220,47220,109885,_gap_,47220,47220,_gap_,109885,_gap_ domain architecture in NCBI 2017_08 genome.

Remove higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


NCBI 2017_08 genome: XP_017042490.1.74164

NCBI 2017_08 genome: XP_017129396.1.32376

NCBI 2017_08 genome: XP_017026326.1.37106

NCBI 2017_08 genome: XP_016992402.1.47939

NCBI 2017_08 genome: XP_016965575.1.21709

NCBI 2017_08 genome: XP_017095956.1.53830

NCBI 2017_08 genome: XP_017095957.1.53830

NCBI 2017_08 genome: XP_017861649.1.65068