SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for _gap_,54585,_gap_,57850 superfamilies

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54585 - Cdc48 domain 2-like
57850 - RING/U-box

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

26 sequences contain the _gap_,54585,_gap_,57850 domain architecture in NCBI 2017_08 genome.

Remove higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


NCBI 2017_08 genome: XP_001388158.1.25317

NCBI 2017_08 genome: XP_001614380.1.43797

NCBI 2017_08 genome: XP_002258702.1.91479

NCBI 2017_08 genome: XP_002142145.1.43237

NCBI 2017_08 genome: XP_666821.1.74355

NCBI 2017_08 genome: XP_726594.1.76580

NCBI 2017_08 genome: XP_001347357.1.26446

NCBI 2017_08 genome: XP_016654172.1.12432

NCBI 2017_08 genome: XP_012648474.1.55366

NCBI 2017_08 genome: XP_013357600.1.45086

NCBI 2017_08 genome: XP_013232776.1.50571

NCBI 2017_08 genome: XP_013436024.1.101860

NCBI 2017_08 genome: XP_011130539.1.81794

NCBI 2017_08 genome: XP_008816024.1.81653

NCBI 2017_08 genome: XP_012335623.1.82741

NCBI 2017_08 genome: XP_018641457.1.24268

NCBI 2017_08 genome: XP_019914420.1.73221

NCBI 2017_08 genome: XP_012763111.2.2076

NCBI 2017_08 genome: XP_008623296.1.22292

NCBI 2017_08 genome: XP_001608877.1.62033

NCBI 2017_08 genome: XP_002368487.1.89292

NCBI 2017_08 genome: XP_763120.1.6148

NCBI 2017_08 genome: XP_003881256.1.31604

NCBI 2017_08 genome: XP_004831663.1.62149

NCBI 2017_08 genome: XP_013252793.1.63183

NCBI 2017_08 genome: XP_008889232.1.28481