SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for _gap_,54236,48452,46934,_gap_,46934,_gap_ superfamilies

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54236 - Ubiquitin-like
48452 - TPR-like
46934 - UBA-like
46934 - UBA-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

15 sequences contain the _gap_,54236,48452,46934,_gap_,46934,_gap_ domain architecture in NCBI 2017_08 genome.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


NCBI 2017_08 genome: XP_016867795.1.92137

NCBI 2017_08 genome: NP_057202.3.87134

NCBI 2017_08 genome: NP_057202.3.92137

NCBI 2017_08 genome: XP_016867794.1.92137

NCBI 2017_08 genome: XP_003270983.1.23891

NCBI 2017_08 genome: XP_004922828.1.14763

NCBI 2017_08 genome: XP_004620245.1.94378

NCBI 2017_08 genome: XP_006873735.1.41390

NCBI 2017_08 genome: XP_006895204.1.29581

NCBI 2017_08 genome: XP_008156975.1.99482

NCBI 2017_08 genome: XP_004702381.1.18182

NCBI 2017_08 genome: XP_008845467.1.79516

NCBI 2017_08 genome: XP_009486622.1.14425

NCBI 2017_08 genome: XP_011796903.1.43180

NCBI 2017_08 genome: XP_021045746.1.100879