SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,54236,47031,50729,_gap_,109880,109885,109885,_gap_,47220,47220,109885,_gap_,47220,47220,_gap_,109885,_gap_ superfamilies

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54236 - Ubiquitin-like
47031 - Second domain of FERM
50729 - PH domain-like
109880 - A middle domain of Talin 1
109885 - I/LWEQ domain
109885 - I/LWEQ domain
47220 - alpha-catenin/vinculin-like
47220 - alpha-catenin/vinculin-like
109885 - I/LWEQ domain
47220 - alpha-catenin/vinculin-like
47220 - alpha-catenin/vinculin-like
109885 - I/LWEQ domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

9 sequences contain the _gap_,54236,47031,50729,_gap_,109880,109885,109885,_gap_,47220,47220,109885,_gap_,47220,47220,_gap_,109885,_gap_ domain architecture in NCBI 2017_08 genome.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


NCBI 2017_08 genome: XP_002108146.1.101920

NCBI 2017_08 genome: XP_009029379.1.102002

NCBI 2017_08 genome: XP_008173123.1.60341

NCBI 2017_08 genome: XP_014636277.1.5094

NCBI 2017_08 genome: XP_004004323.1.66739

NCBI 2017_08 genome: XP_010220861.1.20684

NCBI 2017_08 genome: XP_009556116.1.62272

NCBI 2017_08 genome: XP_020909070.1.97939

NCBI 2017_08 genome: XP_020034007.1.5219