SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for 57850,54928,_gap_ superfamilies in Oryza sativa ssp. japonica 5.0

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57850 - RING/U-box
54928 - RNA-binding domain, RBD

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

4 sequences contain the 57850,54928,_gap_ domain architecture in Oryza sativa ssp. japonica 5.0.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


LOC_Os12g01190.2|13112.m00024|protein

LOC_Os12g01190.1|13112.m00023|protein

LOC_Os11g01190.1|13111.m00026|protein

LOC_Os12g01190.3|13112.m00025|protein