SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,54585,_gap_,57850 superfamilies

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54585 - Cdc48 domain 2-like
57850 - RING/U-box

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

15 sequences contain the _gap_,54585,_gap_,57850 domain architecture in Protozoadb 2010_08.

Remove higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Protozoadb 2010_08: gi|126117235|gb|EAZ51335.1|

Protozoadb 2010_08: gi|126643972|ref|XP_001388158.1|

Protozoadb 2010_08: gi|156096693|ref|XP_001614380.1|

Protozoadb 2010_08: gi|193808772|emb|CAQ39474.1|

Protozoadb 2010_08: gi|221055127|ref|XP_002258702.1|

Protozoadb 2010_08: gi|209557751|gb|EEA07796.1|

Protozoadb 2010_08: gi|209881414|ref|XP_002142145.1|

Protozoadb 2010_08: gi|67607587|ref|XP_666821.1|

Protozoadb 2010_08: gi|82704534|ref|XP_726594.1|

Protozoadb 2010_08: gi|124802083|ref|XP_001347357.1|

Protozoadb 2010_08: gi|23494936|gb|AAN35270.1|

Protozoadb 2010_08: gi|156082786|ref|XP_001608877.1|

Protozoadb 2010_08: gi|211966151|gb|EEB01347.1|

Protozoadb 2010_08: gi|237838379|ref|XP_002368487.1|

Protozoadb 2010_08: gi|71026953|ref|XP_763120.1|