SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 140860,82895,82895,82895,82895,82895,82895,57535,_gap_,49313,49313,_gap_,49313,_gap_,49313,49313,49313,49313,49313,49313,49313,49313,49313,_gap_,49313,49313,_gap_,49313,49313,49313,_gap_,49313,49313,49313,49313,_gap_,57196,57196,57196,_gap_ superfamilies in Hydra vulgaris

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

140860 - Pseudo ankyrin repeat-like
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
57535 - Complement control module/SCR domain
49313 - Cadherin-like
49313 - Cadherin-like
49313 - Cadherin-like
49313 - Cadherin-like
49313 - Cadherin-like
49313 - Cadherin-like
49313 - Cadherin-like
49313 - Cadherin-like
49313 - Cadherin-like
49313 - Cadherin-like
49313 - Cadherin-like
49313 - Cadherin-like
49313 - Cadherin-like
49313 - Cadherin-like
49313 - Cadherin-like
49313 - Cadherin-like
49313 - Cadherin-like
49313 - Cadherin-like
49313 - Cadherin-like
49313 - Cadherin-like
49313 - Cadherin-like
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

1 sequences contain the 140860,82895,82895,82895,82895,82895,82895,57535,_gap_,49313,49313,_gap_,49313,_gap_,49313,49313,49313,49313,49313,49313,49313,49313,49313,_gap_,49313,49313,_gap_,49313,49313,49313,_gap_,49313,49313,49313,49313,_gap_,57196,57196,57196,_gap_ domain architecture in Hydra vulgaris.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


gi|449672938|ref|XP_002154309.2|