SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for 88633,88633,88633,52540,_gap_,52540,_gap_,50494,56672 superfamilies in UniProt viral sequences

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

88633 - Positive stranded ssRNA viruses
88633 - Positive stranded ssRNA viruses
88633 - Positive stranded ssRNA viruses
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
50494 - Trypsin-like serine proteases
56672 - DNA/RNA polymerases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

59 sequences contain the 88633,88633,88633,52540,_gap_,52540,_gap_,50494,56672 domain architecture in UniProt viral sequences.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


A1E165_9PICO

A3FK56_9PICO

A3RIZ6_9PICO

A4KYM2_9PICO

A4KYM3_9PICO

A5HU62_9PICO

A5Y0T0_9PICO

A5Y0T1_9PICO

A6XB61_9PICO

A6XB62_9PICO

A6XB63_9PICO

A6XIG1_9PICO

A6XIG2_9PICO

A6XIG3_9PICO

A9LY64_9PICO

B0LSW9_9PICO

B0YIS2_9PICO

B0YIS3_9PICO

B0ZS80_9PICO

B0ZS81_9PICO

B0ZS82_9PICO

B0ZS83_9PICO

B0ZS84_9PICO

B0ZS85_9PICO

B3TP02_9PICO

B3VI30_9PICO

B3VK81_9PICO

B3VKN8_9PICO

B5AFK4_9PICO

B5AXM5_9PICO

B5B303_9PICO

B7U5S4_9PICO

B8Y8D9_9PICO

B8Y8E0_9PICO

B8Y8E1_9PICO

B8Y8E2_9PICO

B8Y8E3_9PICO

B8Y8E4_9PICO

C5IXG3_9PICO

C5ML51_9PICO

C6JU99_9PICO

C9EBC1_9PICO

C9EBC2_9PICO

D1LUE1_9PICO

D1LUE2_9PICO

D1LUE3_9PICO

D1LUE4_9PICO

D1LUE5_9PICO

D1LUE6_9PICO

D1LUE7_9PICO

D4NUW0_9PICO

D5LMI0_9PICO

Q076B4_9PICO

Q078N6_9PICO

Q0GA17_9PICO

Q0GH72_9PICO

Q0ZQL9_9PICO

Q0ZQM0_9PICO

Q0ZQM1_9PICO