SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 48317,54236,47031,50729,_gap_,109880,109885,109885,_gap_,47220,47220,109885,47220,47220,47220,_gap_,109885,_gap_,103473 superfamilies in Amphimedon queenslandica

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48317 - Acid phosphatase/Vanadium-dependent haloperoxidase
54236 - Ubiquitin-like
47031 - Second domain of FERM
50729 - PH domain-like
109880 - A middle domain of Talin 1
109885 - I/LWEQ domain
109885 - I/LWEQ domain
47220 - alpha-catenin/vinculin-like
47220 - alpha-catenin/vinculin-like
109885 - I/LWEQ domain
47220 - alpha-catenin/vinculin-like
47220 - alpha-catenin/vinculin-like
47220 - alpha-catenin/vinculin-like
109885 - I/LWEQ domain
103473 - MFS general substrate transporter

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

1 sequences contain the 48317,54236,47031,50729,_gap_,109880,109885,109885,_gap_,47220,47220,109885,47220,47220,47220,_gap_,109885,_gap_,103473 domain architecture in Amphimedon queenslandica.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Aqu1.225779|PACid:15724307