SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for Staphylocoagulase superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Staphylocoagulase domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   3 3
Macaca_mulatta_76_1   (Rhesus monkey)   1 1
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   2 2
Mus_musculus_76_38   (House mouse)   1 1
Echinococcus_multilocularis_ 1 1
Echinococcus_granulosus_ 1 1
Taenia_solium_   (Pork tapeworm)   1 1
Aspergillus_zonatus_v1.0 4 2
Streptococcus_agalactiae_A909 2 1
Staphylococcus_pseudintermedius_HKU10-03 2 1
Staphylococcus_aureus_subsp._aureus_JH1 4 2
Staphylococcus_aureus 4 2

Strains
Genome     Number   Proteins
Streptococcus_pyogenes_MGAS1882 1 1
Streptococcus_pyogenes_MGAS15252 1 1
Streptococcus_pyogenes_MGAS10750 1 1
Streptococcus_pyogenes_MGAS10270 1 1
Streptococcus_pyogenes_MGAS2096 1 1
Streptococcus_pyogenes_MGAS9429 1 1
Streptococcus_pyogenes_MGAS6180 1 1
Streptococcus_pyogenes_NZ131 1 1
Streptococcus_agalactiae_ILRI112 2 1
Streptococcus_agalactiae_ILRI005 2 1
Streptococcus_agalactiae_09mas018883 2 1
Streptococcus_agalactiae_SA20-06 1 1
Streptococcus_agalactiae_GD201008-001 2 1
Streptococcus_agalactiae_NEM316 1 1
Streptococcus_agalactiae_2603V/R 2 1
Staphylococcus_aureus_subsp._aureus_MSHR1132 4 2
Staphylococcus_pseudintermedius_ED99 2 1
Staphylococcus_aureus_CA-347 4 2
Staphylococcus_aureus_Bmb9393 4 2
Staphylococcus_aureus_M1 4 2
Staphylococcus_aureus_08BA02176 6 3
Staphylococcus_aureus_ST228/18412 4 2
Staphylococcus_aureus_ST228/18341 4 2
Staphylococcus_aureus_ST228/16125 4 2
Staphylococcus_aureus_ST228/16035 4 2
Staphylococcus_aureus_ST228/15532 4 2
Staphylococcus_aureus_ST228/10497 4 2
Staphylococcus_aureus_ST228/10388 4 2
Staphylococcus_aureus_04-02981 4 2
Staphylococcus_aureus_RF122 4 2
Staphylococcus_aureus_subsp._aureus_Z172 4 2
Staphylococcus_aureus_subsp._aureus_6850 4 2
Staphylococcus_aureus_subsp._aureus_SA957 4 2
Staphylococcus_aureus_subsp._aureus_CN1 4 2
Staphylococcus_aureus_subsp._aureus_SA40 4 2
Staphylococcus_aureus_subsp._aureus_11819-97 4 2
Staphylococcus_aureus_subsp._aureus_M013 4 2
Staphylococcus_aureus_subsp._aureus_HO_5096_0412 4 2
Staphylococcus_aureus_subsp._aureus_VC40 4 2
Staphylococcus_aureus_subsp._aureus_T0131 2 1
Staphylococcus_aureus_subsp._aureus_LGA251 2 1
Staphylococcus_aureus_subsp._aureus_ECT-R_2 4 2
Staphylococcus_aureus_subsp._aureus_JKD6159 4 2
Staphylococcus_aureus_subsp._aureus_ED133 6 3
Staphylococcus_aureus_subsp._aureus_ED98 4 2
Staphylococcus_aureus_subsp._aureus_TW20 4 2
Staphylococcus_aureus_subsp._aureus_55/2053 4 2
Staphylococcus_aureus_subsp._aureus_TCH60 4 2
Staphylococcus_aureus_subsp._aureus_str._JKD6008 4 2
Staphylococcus_aureus_subsp._aureus_71193 4 2
Staphylococcus_aureus_subsp._aureus_S0385 6 3
Staphylococcus_aureus_subsp._aureus_str._Newman 4 2
Staphylococcus_aureus_subsp._aureus_Mu3 4 2
Staphylococcus_aureus_subsp._aureus_USA300_TCH1516 4 2
Staphylococcus_aureus_subsp._aureus_USA300_FPR3757 4 2
Staphylococcus_aureus_subsp._aureus_JH9 4 2
Staphylococcus_aureus_subsp._aureus_MSSA476 4 2
Staphylococcus_aureus_subsp._aureus_MRSA252 2 1
Staphylococcus_aureus_subsp._aureus_MW2 4 3
Staphylococcus_aureus_subsp._aureus_N315 4 2
Staphylococcus_aureus_subsp._aureus_Mu50 4 2
Staphylococcus_aureus_subsp._aureus_COL 4 2
Staphylococcus_aureus_subsp._aureus_NCTC_8325 2 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   3 3
Homo_sapiens__(NCBI_version)   (Human)   1 1
Protein_Data_Bank_(all_PDB_sequenc) 12 6
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 20 20
STRING_v9.0.5_(STRING) 69 39
Uniprot_2018_03_genome 614 347
NCBI_2017_08_genome 33493 17069
TargetDB__(Targets) 4 2
PDB_chains_(SCOP_1.75)_(PDB) 4 2

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]