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Domain combinations for KA1-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a KA1-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   37 37
Pan_troglodytes_76_2.1.4   (Chimpanzee)   7 7
Gorilla_gorilla_76_3.1   (Western gorilla)   11 11
Pongo_abelii_76_2   (Sumatran orangutan)   7 7
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   7 7
Papio_anubis_76   (Olive baboon)   4 4
Macaca_mulatta_76_1   (Rhesus monkey)   14 14
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   22 22
Otolemur_garnettii_76_3   (Small-eared galago)   7 7
Microcebus_murinus_76_1   (Gray mouse lemur)   6 6
Rattus_norvegicus_76_5.0   (Norway rat)   6 6
Mus_musculus_76_38   (House mouse)   17 17
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   8 8
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   10 10
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   8 8
Cavia_porcellus_76_3   (Domestic guinea pig)   8 8
Oryctolagus_cuniculus_76_2   (Rabbit)   8 8
Ochotona_princeps_76   (American pika)   5 5
Tupaia_belangeri_76   (Northern tree shrew)   6 6
Sus_scrofa_76_10.2   (Pig)   7 7
Bos_taurus_76_3.1   (Cattle)   9 9
Ovis_aries_76_3.1   (Sheep)   9 9
Vicugna_pacos_76_1   (Alpaca)   5 5
Tursiops_truncatus_76_1   (Bottlenose dolphin)   8 8
Mustela_putorius_furo_76_1.0   (Domestic ferret)   6 6
Ailuropoda_melanoleuca_76_1   (Giant panda)   8 8
Canis_familiaris_76_3.1   (Dog)   8 8
Felis_catus_76_6.2   (Domestic cat)   8 8
Equus_caballus_76_2   (Horse)   9 9
Myotis_lucifugus_76_2.0   (Little brown bat)   7 7
Pteropus_vampyrus_76_1   (Large flying fox)   8 8
Sorex_araneus_76_1   (European shrew)   6 6
Erinaceus_europaeus_76   (Western European hedgehog)   5 5
Procavia_capensis_76_1   (Cape rock hyrax)   9 8
Loxodonta_africana_76_3   (African savanna elephant)   23 23
Echinops_telfairi_76   (Small Madagascar hedgehog)   5 5
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   24 24
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   7 7
Macropus_eugenii_76_1.0   (Tammar wallaby)   8 8
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   7 7
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   5 5
Ornithorhynchus_anatinus_76_5   (Platypus)   6 6
Saccoglossus_kowalevskii_v3.0 7 7
Petromyzon_marinus_76_7.0   (Sea lamprey)   2 2
Meleagris_gallopavo_76_2   (Turkey)   6 6
Gallus_gallus_76_4   (Chicken)   5 5
Anas_platyrhynchos_76_1.0   (Mallard)   9 9
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   7 7
Ficedula_albicollis_76_1.0   (Collared flycatcher)   5 5
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   8 8
Anolis_carolinensis_76_2.0   (Green anole)   7 7
Xenopus_laevis_   (African clawed frog)   21 21
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   8 8
Latimeria_chalumnae_76_1   (Coelacanth)   10 10
Lepisosteus_oculatus_76   (Spotted gar)   9 9
Gadus_morhua_76_1   (Atlantic cod)   7 7
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   10 10
Takifugu_rubripes_76_4   (Torafugu)   36 36
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   13 13
Oryzias_latipes_76_1   (Japanese medaka)   11 11
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   7 7
Poecilia_formosa_76   (Amazon molly)   8 8
Oreochromis_niloticus_76_1.0   (Nile tilapia)   14 14
Astyanax_mexicanus_76   (Mexican tetra)   9 9
Danio_rerio_76_9   (Zebrafish)   18 18
Oikopleura_dioica 3 3
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   17 17
Ciona_intestinalis_76   (Vase tunicate)   4 4
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   5 5
Adineta_vaga 10 10
Octopus_bimaculoides_280 3 3
Crassostrea_gigas_22   (Pacific oyster)   4 4
Lottia_gigantea_   (Owl limpet)   3 3
Helobdella_robusta_ 8 8
Capitella_sp._I_ 2 2
Danaus_plexippus_OGS1.0   (Monarch butterfly)   4 4
Heliconius_melpomene_   (Postman butterfly)   3 3
Bombyx_mori_   (Domestic silkworm)   3 3
Nasonia_vitripennis_   (Jewel wasp)   3 3
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   1 1
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   4 4
Linepithema_humile_v1.1   (Argentine ant)   4 4
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   4 4
Solenopsis_invicta_v.2.2.3   (Red fire ant)   3 3
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   3 3
Atta_cephalotes_v1.1 4 4
Camponotus_floridanus_v3.3   (Florida carpenter ant)   4 4
Lucilia_cuprina   (Australian sheep blowfly)   2 2
Drosophila_grimshawi_1.3 3 3
Drosophila_willistoni_1.3 4 4
Drosophila_pseudoobscura_2.13 3 3
Drosophila_persimilis_1.3 3 3
Drosophila_suzukii 2 2
Drosophila_yakuba_1.3 3 3
Drosophila_simulans_1.3 1 1
Drosophila_sechellia_1.3 3 3
Drosophila_melanogaster_76_5   (Fruit fly)   9 9
Drosophila_erecta_1.3 3 3
Drosophila_ananassae_1.3 3 3
Drosophila_virilis_1.2 3 3
Drosophila_mojavensis_1.3 3 3
Megaselia_scalaris_22 1 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   1 1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   3 3
Anopheles_darlingi_22   (American malaria mosquito)   2 2
Anopheles_gambiae_49_3j   (African malaria mosquito)   2 2
Tribolium_castaneum_3.0   (Red flour beetle)   5 4
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   3 3
Acyrthosiphon_pisum_   (Pea aphid)   2 2
Rhodnius_prolixus_22 4 4
Daphnia_pulex_   (Common water flea)   3 3
Strigamia_maritima_22 2 2
Sarcoptes_scabiei 4 4
Tetranychus_urticae_   (Two-spotted spider mite)   3 3
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   4 4
Pristionchus_pacificus_ 6 6
Meloidogyne_incognita_   (Southern root-knot nematode)   6 6
Meloidogyne_hapla_ 2 2
Onchocerca_volvulus_22 3 3
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   9 9
Caenorhabditis_japonica_ 2 2
Caenorhabditis_brenneri_ 6 6
Caenorhabditis_remanei_ 4 4
Caenorhabditis_elegans_76_235   (Roundworm)   26 26
Caenorhabditis_briggsae_2 4 4
Trichinella_spiralis_22 4 4
Hymenolepis_microstoma_ 4 4
Echinococcus_multilocularis_ 5 5
Echinococcus_granulosus_ 4 4
Taenia_solium_   (Pork tapeworm)   3 3
Schistosoma_mansoni_ 9 9
Mnemiopsis_leidyi   (Sea walnut)   3 3
Acropora_digitifera_v1.0 1 1
Nematostella_vectensis_1.0   (Starlet sea anemone)   2 2
Hydra_vulgaris 5 5
Amphimedon_queenslandica 3 3
Trichoplax_adhaerens_ 3 3
Proterospongia_sp._ATCC_50818_ 5 5
Monosiga_brevicollis_ 4 4
Sphaeroforma_arctica_JP610_ 11 11
Capsaspora_owczarzaki_ATCC_30864_ 9 9
Conidiobolus_coronatus_NRRL28638_v1.0 5 5
Mortierella_verticillata_NRRL_6337_ 3 3
Rhizopus_oryzae_RA_99-880_ 5 5
Mucor_circinelloides_ 4 4
Rhizomucor_miehei_CAU432_ 5 5
Malassezia_globosa_CBS_7966_ 6 6
Sporisorium_reilianum_22 3 3
Ustilago_maydis_ 2 2
Mixia_osmundae_IAM_14324_v1.0 3 3
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 3 3
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 2 2
Melampsora_laricis-populina_ 2 2
Rhodotorula_graminis_WP1_v1.0 2 2
Sporobolomyces_roseus_IAM_13481_ 2 2
Microbotryum_violaceum_22 3 3
Wallemia_sebi_v1.0 2 2
Sphaerobolus_stellatus_v1.0 4 4
Piloderma_croceum_F_1598_v1.0 3 3
Serpula_lacrymans_var._lacrymans_S7.9_ 3 3
Coniophora_puteana 3 3
Hydnomerulius_pinastri_v2.0 3 3
Paxillus_rubicundulus_Ve08.2h10_v1.0 3 3
Pisolithus_microcarpus_441_v1.0 3 3
Pisolithus_tinctorius_Marx_270_v1.0 4 4
Scleroderma_citrinum_Foug_A_v1.0 5 5
Coprinopsis_cinerea_okayama7_130_v3 4 4
Pleurotus_ostreatus_   (Oyster mushroom)   3 3
Amanita_thiersii_Skay4041_v1.0 3 3
Amanita_muscaria_Koide_v1.0   (Fly agaric)   5 5
Galerina_marginata_v1.0 3 3
Hebeloma_cylindrosporum_h7_v2.0 4 4
Laccaria_bicolor_S238N-H82_ 2 2
Agaricus_bisporus_var._bisporus_ 4 4
Schizophyllum_commune_ 2 2
Stereum_hirsutum_FP-91666_SS1__v1.0 3 3
Heterobasidion_annosum_ 1 1
Gloeophyllum_trabeumv1.0 3 3
Punctularia_strigosozonata_v1.0 2 2
Sebacina_vermifera_MAFF_305830_v1.0 3 3
Fomitiporia_mediterranea_v1.0 3 3
Tulasnella_calospora_AL13/4D_v1.0 3 3
Postia_placenta_ 5 5
Wolfiporia_cocos_MD-104_SS10__v1.0 3 3
Fomitopsis_pinicolav1.0 2 2
Fomitopsis_pinicola_FP-58527_SS1_v3.0 2 2
Dichomitus_squalens 3 3
Trametes_versicolor_v1.0 3 3
Tremella_mesenterica_   (Witches' butter)   3 3
Daldinia_eschscholzii_EC12_v1.0 2 2
Apiospora_montagnei_NRRL_25634_v1.0 2 2
Magnaporthe_poae_ATCC_64411_22 2 2
Magnaporthe_grisea_70-15_ 2 2
Podospora_anserina_ 2 2
Sporotrichum_thermophile_ATCC_42464_ 2 2
Thielavia_terrestris_NRRL_8126_ 2 2
Neurospora_tetrasperma_ 2 2
Neurospora_discreta_FGSC_8579_ 2 2
Neurospora_crassa_OR74A_ 2 2
Cryphonectria_parasitica_   (Chestnut blight fungus)   2 2
Verticillium_albo-atrum_VaMs.102_ 2 2
Verticillium_dahliae_VdLs.17_ 2 2
Acremonium_alcalophilumv_1.0 2 2
Glomerella_graminicola_22 2 2
Fusarium_graminearum_ 2 2
Nectria_haematococca_mpVI_ 2 2
Fusarium_oxysporum_f._sp._lycopersici_4286_ 2 2
Fusarium_verticillioides_7600_ 2 2
Trichoderma_asperellum_CBS_433.97_v1.0 2 2
Trichoderma_atroviride_ 2 2
Trichoderma_citrinoviride_v1.0 2 2
Trichoderma_reesei_1.2 2 2
Trichoderma_virens_Gv29-8_ 2 2
Trichoderma_longibrachiatum_ATCC_18648_v1.0 2 2
Trichoderma_harzianum_CBS_226.95_v1.0 2 2
Amorphotheca_resinae_v1.0   (Creosote fungus)   2 2
Botrytis_cinerea_B05.10_ 2 2
Sclerotinia_sclerotiorum_ 2 2
Blumeria_graminis_22 2 2
Didymella_exigua_CBS_183.55_v1.0 2 2
Leptosphaeria_maculans_22 2 2
Setosphaeria_turcica_v1.0 2 2
Cochliobolus_miyabeanus_ATCC_44560_v1.0 2 2
Cochliobolus_victoriae_FI3_v1.0 2 2
Cochliobolus_carbonum_26-R-13_v1.0 2 2
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   2 2
Alternaria_brassicicola_ 2 2
Cochliobolus_lunatus_m118_v2.0 2 2
Pyrenophora_teres_f._teres_22 2 2
Pyrenophora_tritici-repentis_ 2 2
Mycosphaerella_graminicola_IPO323_ 2 2
Zasmidium_cellare_ATCC_36951_v1.0 2 2
Dothistroma_septosporum 2 2
Septoria_musiva_v1.0 2 2
Mycosphaerella_fijiensis_CIRAD86_ 2 2
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 2 2
Paracoccidioides_brasiliensis_Pb18_ 2 2
Coccidioides_posadasii_RMSCC_3488_ 2 2
Coccidioides_immitis_RS_ 2 2
Ajellomyces_dermatitidis_SLH14081_ 2 2
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 2 2
Microsporum_canis_CBS_113480_ 2 2
Trichophyton_equinum_CBS_127.97_ 2 2
Trichophyton_verrucosum_HKI_0517_ 2 2
Arthroderma_benhamiae_CBS_112371_ 2 2
Trichophyton_tonsurans_CBS_112818_ 2 2
Trichophyton_rubrum_CBS_118892_ 2 2
Uncinocarpus_reesii_1704_ 2 2
Aspergillus_zonatus_v1.0 2 2
Penicillium_chrysogenum_Wisconsin_54-1255_ 2 2
Penicillium_chrysogenum_v1.0 2 2
Aspergillus_acidus_v1.0 2 2
Aspergillus_fumigatus_Af293 2 2
Aspergillus_brasiliensis_v1.0 2 2
Aspergillus_nidulans_FGSC_A4_ 2 2
Aspergillus_sydowii_v1.0 2 2
Aspergillus_versicolor_v1.0 2 2
Aspergillus_glaucus 2 2
Aspergillus_carbonarius_ITEM_5010_ 2 2
Neosartorya_fischeri_NRRL_181_ 2 2
Aspergillus_terreus_NIH2624_ 2 2
Aspergillus_tubingensis_v1.0 2 2
Aspergillus_wentii_v1.0 2 2
Aspergillus_oryzae_RIB40_ 2 2
Aspergillus_niger_22 2 2
Aspergillus_niger_ATCC_1015_ 2 2
Aspergillus_flavus_NRRL3357_ 2 2
Aspergillus_clavatus_NRRL_1_ 2 2
Penicillium_marneffei_ATCC_18224_ 2 2
Tuber_melanosporum_Mel28_22 2 2
Tuber_melanosporum_Vittad_   (Perigord truffle)   2 2
Hansenula_polymorpha_v2.0 2 2
Dekkera_bruxellensis_CBS_2499_v2.0 2 2
Pichia_membranifaciensv1.0 2 2
Candida_tanzawaensis_NRRL_Y-17324__v1.0 2 2
Candida_dubliniensis_CD36_ 2 2
Candida_tropicalis_MYA-3404_ 2 2
Candida_parapsilosis_ 2 2
Candida_albicans_SC5314 2 2
Lodderomyces_elongisporus_NRRL_YB-4239_ 2 2
Babjeviella_inositovora_NRRL_Y-12698_v1.0 2 2
Pichia_stipitis_CBS_6054_ 2 2
Candida_guilliermondii_ATCC_6260_ 2 2
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 3 3
Debaromyces_hansenii 2 2
Wickerhamomyces_anomalus 2 2
Pichia_pastoris_GS115_ 2 2
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 3 3
Yarrowia_lipolytica_CLIB122 2 2
Candida_lusitaniae_ATCC_42720_ 2 2
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 2 2
Vanderwaltozyma_polyspora_DSM_70294_ 3 3
Candida_glabrata_CBS138 3 3
Kluyveromyces_thermotolerans_CBS_6340 2 2
Lachancea_kluyveri_ 2 2
Kluyveromyces_waltii 2 2
Ashbya_gossypii_ATCC_10895_ 2 2
Zygosaccharomyces_rouxii_ 2 2
Saccharomyces_mikatae_MIT 3 3
Saccharomyces_paradoxus_MIT 3 3
Saccharomyces_cerevisiae_76   (Baker's yeast)   3 3
Saccharomyces_bayanus_MIT 3 3
Kluyveromyces_lactis 2 2
Schizosaccharomyces_cryophilus_OY26_22 3 3
Schizosaccharomyces_octosporus_yFS286_ 3 3
Schizosaccharomyces_japonicus_yFS275_ 3 3
Schizosaccharomyces_pombe   (Fission yeast)   3 3
Catenaria_anguillulae_PL171_v1.0 6 6
Allomyces_macrogynus_ATCC_38327_ 12 12
Spizellomyces_punctatus_DAOM_BR117_ 9 9
Dictyostelium_discoideum 4 4
Dictyostelium_purpureum_ 4 4
Selaginella_moellendorffii_ 6 6
Pinus_taeda   (Loblolly pine)   2 2
Picea_abies   (Norway spruce)   1 1
Eucalyptus_grandis_v201   (Rose gum)   7 7
Theobroma_cacao_B97-61/B2_v1   (Cacao)   1 1
Gossypium_raimondii_v221 3 3
Citrus_clementina_v165 3 3
Citrus_sinensis_v154   (Sweet orange)   5 5
Thellungiella_halophila_v173 4 4
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   7 7
Capsella_rubella_v183 4 4
Arabidopsis_lyrata_   (Lyrate rockcress)   4 4
Arabidopsis_thaliana_10   (Thale cress)   6 6
Carica_papaya_   (Papaya)   1 1
Medicago_truncatula_   (Barrel medic)   6 6
Phaseolus_vulgaris_v186   (French bean)   3 3
Glycine_max_v109   (Soybean)   6 6
Cucumis_sativus_v122   (Cucumber)   1 1
Fragaria_vesca_   (Wild strawberry)   1 1
Malus_domestica_v196   (Apple)   6 6
Prunus_persica_v139   (Peach)   2 2
Linum_usitatissimum_v200   (Flax)   5 5
Manihot_esculenta_v147   (Cassava)   3 3
Populus_trichocarpa_v156   (Black cottonwood)   6 6
Vitis_vinifera_   (Wine grape)   3 3
Mimulus_guttatus_v140   (Spotted monkey flower)   4 4
Solanum_lycopersicum_v.2.3   (Tomato)   3 3
Solanum_tuberosum_   (Potato)   4 4
Actinidia_chinensis_Hongyang_ 5 5
Aquilegia_coerulea_v195 17 17
Triticum_urartu_22 5 5
Triticum_aestivum_22   (Bread wheat)   17 17
Aegilops_tauschii_22 8 8
Brachypodium_distachyon_   (Stiff brome)   6 6
Oryza_barthii_22   (African wild rice)   11 11
Oryza_meridionalis_22 12 12
Oryza_glumaepatula_22 13 13
Oryza_glaberrima   (African rice)   4 4
Oryza_punctata_22 10 10
Oryza_nivara_22 11 11
Oryza_brachyantha_22   (Malo sina)   6 6
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   18 18
Oryza_sativa_v193   (Rice)   18 18
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   9 9
Panicum_virgatum_v202   (Switchgrass)   12 12
Setaria_italica_v164   (Foxtail millet)   7 7
Zea_mays_subsp._mays_   (Maize)   14 14
Zea_mays_v181   (Maize)   13 13
Sorghum_bicolor_   (Sorghum)   5 5
Musa_balbisiana   (Balbis banana)   3 3
Musa_acuminata_22   (Wild Malaysian banana)   4 4
Amborella_trichopoda_22 1 1
Physcomitrella_patens 4 4
Coccomyxa_subellipsoidea_sp._C-169_v2 1 1
Asterochloris_sp._Cgr/DA1pho_v1.0 1 1
Chlorella_variabilis_sp._NC64A_ 1 1
Chlorella_vulgaris_ 1 1
Volvox_carteri_f._nagariensis_ 1 1
Volvox_carteri_v199 1 1
Ostreococcus_sp._RCC809_ 1 1
Ostreococcus_lucimarinus_CCE9901_ 1 1
Ostreococcus_tauri_ 1 1
Bathycoccus_prasinos_ 1 1
Micromonas_sp._RCC299_ 1 1
Micromonas_pusilla_CCMP1545_v3.0 1 1
Cyanidioschyzon_merolae_strain_10D_22 1 1
Cyanidioschyzon_merolae 1 1
Porphyridium_purpureum_02_2012 1 1
Thecamonas_trahens_ATCC_50062_ 8 8
Giardia_lamblia_2.3 2 2
Cyanophora_paradoxa_ 1 1
Leishmania_mexicana_2.4 1 1
Leishmania_major_strain_Friedlin_ 2 2
Leishmania_infantum_JPCM5_2.4 2 2
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 2 2
Trypanosoma_vivax_ 2 2
Trypanosoma_congolense_2.4 1 1
Trypanosoma_brucei_gambiense_v4.1 2 2
Trypanosoma_brucei_TREU927_v4.1 2 2
Ectocarpus_siliculosus 3 2
Albugo_laibachii_22 2 2
Pythium_iwayamai_DAOM_BR242034_22 2 2
Pythium_arrhenomanes_ATCC_12531_22 2 2
Pythium_ultimum_v1.7-2 2 2
Pythium_aphanidermatum_DAOM_BR444_22 1 1
Pythium_irregulare_DAOM_BR486_22 1 1
Pythium_vexans_DAOM_BR484_22 1 1
Phytophthora_ramorum_1.1   (Sudden oak death agent)   1 1
Phytophthora_sojae_1.1 2 2
Phytophthora_infestans_T30-4_ 1 1
Phytophthora_capsici_ 2 2
Hyaloperonospora_arabidopsidis_22 1 1
Phaeodactylum_tricornutumCCAP_1055/1 1 1
Fragilariopsis_cylindrus 1 1
Thalassiosira_pseudonana_CCMP1335 1 1
Perkinsus_marinus_ATCC_50983_ 1 1
Paramecium_tetraurelia_ 6 6
Tetrahymena_thermophila_SB210_1_ 2 2
Cryptosporidium_hominis 1 1
Cryptosporidium_muris 1 1
Cryptosporidium_parvum_Iowa_II 1 1
Neospora_caninum 1 1
Toxoplasma_gondii_VEG 1 1
Toxoplasma_gondii_ME49 1 1
Toxoplasma_gondii_GT1 1 1
Theileria_parva__ 1 1
Theileria_annulata 1 1
Symbiodinium_minutum_clade_B1_v1.2 3 3
Trichomonas_vaginalis_ 1 1
Emiliania_huxleyi_CCMP1516_ 2 2

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   14 14
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   9 9
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   2 2
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   3 3
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   16 16
Cryptococcus_neoformans_var._grubii_H99_ 3 3
Cryptococcus_neoformans_B-3501A_ 3 3
Cryptococcus_neoformans_JEC21_ 2 2
Paracoccidioides_brasiliensis_Pb01_ 2 2
Paracoccidioides_brasiliensis_Pb03_ 2 2
Coccidioides_posadasii_str._Silveira_ 2 2
Coccidioides_immitis_RMSCC_3703_ 2 2
Coccidioides_immitis_RMSCC_2394_ 2 2
Coccidioides_immitis_H538.4_ 2 2
Ajellomyces_dermatitidis_ER-3_ 2 2
Histoplasma_capsulatum_H88 2 2
Histoplasma_capsulatum_G186AR 2 2
Aspergillus_fumigatus_A1163_ 2 2
Candida_albicans_WO-1_ 2 2
Saccharomyces_cerevisiae_UC5 2 2
Saccharomyces_cerevisiae_PW5 3 3
Saccharomyces_cerevisiae_FL100 1 1
Saccharomyces_cerevisiae_CLIB324 1 1
Saccharomyces_cerevisiae_CBS7960 1 1
Saccharomyces_cerevisiae_YJM269 3 3
Saccharomyces_cerevisiae_T7 3 3
Saccharomyces_cerevisiae_FostersB 3 3
Saccharomyces_cerevisiae_FostersO 1 1
Saccharomyces_cerevisiae_VL3 3 3
Saccharomyces_cerevisiae_Vin13 1 1
Saccharomyces_cerevisiae_LalvinQA23 3 3
Saccharomyces_cerevisiae_AWRI796 3 3
Saccharomyces_cerevisiae_Sigma1278b 3 3
Saccharomyces_cerevisiae_W303 3 3
Saccharomyces_cerevisiae_JAY291 3 3
Saccharomyces_cerevisiae_AWRI1631 3 3
Saccharomyces_cerevisiae_YPS163 2 2
Saccharomyces_cerevisiae_CLIB215 1 1
Saccharomyces_cerevisiae_YJM789_ 3 3
Saccharomyces_cerevisiae_YJM789 3 3
Saccharomyces_cerevisiae_RM11-1a 3 3
Saccharomyces_cerevisiae_RM11-1a_ 3 3
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   3 3
Schizosaccharomyces_pombe_972h-_ 3 3
Batrachochytrium_dendrobatidis_JEL423_ 7 7
Batrachochytrium_dendrobatidis_JAM81_ 5 5
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   1 1
Hordeum_vulgare_22   (Domesticated barley)   8 8
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   8 8
Trypanosoma_brucei_Lister_427_v4.1 2 2
Neospora_caninum_Nc-Liverpool_6.2 1 1

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   7 7
Pan_troglodytes_69_2.1.4   (Chimpanzee)   6 6
Gorilla_gorilla_69_3.1   (Western gorilla)   7 7
Pongo_abelii_69_2   (Sumatran orangutan)   7 7
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   7 7
Macaca_mulatta_69_1   (Rhesus monkey)   7 7
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   7 7
Otolemur_garnettii_69_3   (Small-eared galago)   7 7
Microcebus_murinus_69_1   (Gray mouse lemur)   6 6
Rattus_norvegicus_69_3.4   (Norway rat)   8 8
Mus_musculus_69_38   (House mouse)   8 8
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   7 7
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   9 9
Cavia_porcellus_69_3   (Domestic guinea pig)   8 8
Oryctolagus_cuniculus_69_2   (Rabbit)   8 8
Ochotona_princeps_69   (American pika)   5 5
Tupaia_belangeri_69   (Northern tree shrew)   6 6
Sus_scrofa_69_10.2   (Pig)   6 6
Bos_taurus_69_3.1   (Cattle)   8 8
Vicugna_pacos_69_1   (Alpaca)   5 5
Tursiops_truncatus_69_1   (Bottlenose dolphin)   7 7
Mustela_putorius_furo_69_1.0   (Domestic ferret)   6 6
Ailuropoda_melanoleuca_69_1   (Giant panda)   7 7
Canis_familiaris_69_3.1   (Dog)   7 7
Felis_catus_69   (Domestic cat)   5 5
Equus_caballus_69_2   (Horse)   7 7
Myotis_lucifugus_69_2.0   (Little brown bat)   7 7
Pteropus_vampyrus_69_1   (Large flying fox)   7 7
Sorex_araneus_69_1   (European shrew)   6 6
Erinaceus_europaeus_69   (Western European hedgehog)   5 5
Procavia_capensis_69_1   (Cape rock hyrax)   8 7
Loxodonta_africana_69_3   (African savanna elephant)   19 19
Echinops_telfairi_69   (Small Madagascar hedgehog)   5 5
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   6 6
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   6 6
Macropus_eugenii_69_1.0   (Tammar wallaby)   7 7
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   5 5
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   5 5
Ornithorhynchus_anatinus_69_5   (Platypus)   5 5
Petromyzon_marinus_69_7.0   (Sea lamprey)   2 2
Meleagris_gallopavo_69_2   (Turkey)   5 5
Gallus_gallus_69_2   (Chicken)   5 5
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   6 6
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   6 6
Anolis_carolinensis_69_2.0   (Green anole)   6 6
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   7 7
Latimeria_chalumnae_69_1   (Coelacanth)   7 7
Gadus_morhua_69_1   (Atlantic cod)   7 7
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   7 7
Takifugu_rubripes_69_4   (Torafugu)   8 8
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   10 10
Oryzias_latipes_69_1   (Japanese medaka)   8 8
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   7 7
Oreochromis_niloticus_69_1.0   (Nile tilapia)   9 9
Danio_rerio_69_9   (Zebrafish)   9 9
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   3 3
Ciona_intestinalis_69   (Vase tunicate)   3 3
Drosophila_melanogaster_69_5   (Fruit fly)   3 3
Caenorhabditis_elegans_69_215   (Roundworm)   6 6
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   3 3
Arabidopsis_thaliana_10   (Thale cress)   3 3

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   38 38
Homo_sapiens__(NCBI_version)   (Human)   16 16
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   7 7
Loa_loa_v3.3_(Request)   (Eye worm)   3 3
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   3 3
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   3 3
Moniliophthora_perniciosa_FA553__(Genome_survey) 4 4
Lotus_japonicus__(Early_assembly) 1 1
Malus_x_domestica_(Duplicate)   (Apple)   6 6
Ricinus_communis__(Early_assembly)   (Castor bean)   1 1
Nicotiana_benthamiana_0.4.4_(Early_draft) 10 10
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   3 3
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   3 3
Phoenix_dactylifera__(Early_draft)   (Date palm)   4 4
Protein_Data_Bank_(all_PDB_sequenc) 73 73
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 93 93
STRING_v9.0.5_(STRING) 415 414
Uniprot_2018_03_genome 5886 5873
NCBI_2017_08_genome 8252 8245
TargetDB__(Targets) 20 20
PDB_chains_(SCOP_1.75)_(PDB) 5 5
Protozoadb_2010_08_(Protozoadb) 26 26

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