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Domain combinations for Coronavirus S2 glycoprotein superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Coronavirus S2 glycoprotein domain in that genome.

Complete genomes
Genome     Number   Proteins
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   1 1
Aspergillus_acidus_v1.0 1 1
Aspergillus_tubingensis_v1.0 1 1
Nocardia_farcinica_IFM_10152 1 1
Desulfotalea_psychrophila_LSv54 1 1
Shewanella_piezotolerans_WP3 1 1
Shewanella_loihica_PV-4 1 1
Shewanella_halifaxensis_HAW-EB4 1 1
Shewanella_sediminis_HAW-EB3 1 1
Shewanella_pealeana_ATCC_700345 1 1
Shewanella_oneidensis_MR-1 1 1
Shewanella_baltica_OS185 1 1
Shewanella_woodyi_ATCC_51908 1 1
Shewanella_sp._MR-4 1 1
Shewanella_amazonensis_SB2B 1 1
Shewanella_violacea_DSS12 1 1
Glaciecola_nitratireducens_FR1064 1 1
Nitrosococcus_watsonii_C-113 1 1
Nitrosococcus_oceani_ATCC_19707 1 1

Strains
Genome     Number   Proteins
Bacillus_thuringiensis_MC28 1 1
Desulfovibrio_desulfuricans_ND132 1 1
Shewanella_baltica_BA175 1 1
Shewanella_baltica_OS117 1 1
Shewanella_baltica_OS223 1 1
Shewanella_baltica_OS155 1 1
Glaciecola_psychrophila_170 1 1

Longest transcript per gene
Genome     Number   Proteins
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   1 1

Others
Genome     Number   Proteins
NCBI_plasmid_sequences_(Plasmids) 1 1
UniProt__viral_sequences_(Viral) 1504 873
Uniprot_2018_03_genome 6908 3924
PDB_chains_(SCOP_1.75)_(PDB) 15 14
STRING_v9.0.5_(STRING) 15 15
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 67 64
NCBI_viral_sequences_(Viral) 88 45
NCBI_2017_08_genome 250 196
Protein_Data_Bank_(all_PDB_sequenc) 324 187

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