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Domain combinations for YbjQ-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a YbjQ-like domain in that genome.

Complete genomes
Genome Number Proteins

Homo_sapiens_76_38 (Human) 1 1

Sus_scrofa_76_10.2 (Pig) 1 1

Xenopus_laevis_ (African clawed frog) 1 1

Tetraodon_nigroviridis_76_8 (Spotted green pufferfish) 2 2

Takifugu_rubripes_76_4 (Torafugu) 3 3

Oryzias_latipes_76_1 (Japanese medaka) 1 1

Xiphophorus_maculatus_76_4.4.2 (Southern platyfish) 1 1

Poecilia_formosa_76 (Amazon molly) 1 1

Oreochromis_niloticus_76_1.0 (Nile tilapia) 2 2

Danio_rerio_76_9 (Zebrafish) 1 1

Ciona_savignyi_76_2.0 (Pacific transparent sea squirt) 2 2

Lucilia_cuprina (Australian sheep blowfly) 2 2

Pristionchus_pacificus_ 1 1

Onchocerca_volvulus_22 1 1

Brugia_malayi_WS250 (Agent of lymphatic filariasis) 1 1

Caenorhabditis_remanei_ 1 1

Echinococcus_multilocularis_ 1 1

Echinococcus_granulosus_ 1 1

Hydra_vulgaris 1 1

Monosiga_brevicollis_ 1 1

Capsaspora_owczarzaki_ATCC_30864_ 1 1

Mortierella_verticillata_NRRL_6337_ 2 2

Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1 1

Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 3 3

Melampsora_laricis-populina_ 2 2

Microbotryum_violaceum_22 1 1

Wallemia_sebi_v1.0 2 2

Daldinia_eschscholzii_EC12_v1.0 2 2

Apiospora_montagnei_NRRL_25634_v1.0 2 2

Magnaporthe_poae_ATCC_64411_22 1 1

Magnaporthe_grisea_70-15_ 2 2

Podospora_anserina_ 1 1

Sporotrichum_thermophile_ATCC_42464_ 1 1

Chaetomium_globosum_CBS_148.51_ 1 1

Cryphonectria_parasitica_ (Chestnut blight fungus) 1 1

Verticillium_albo-atrum_VaMs.102_ 1 1

Verticillium_dahliae_VdLs.17_ 1 1

Acremonium_alcalophilumv_1.0 1 1

Fusarium_graminearum_ 1 1

Nectria_haematococca_mpVI_ 1 1

Fusarium_oxysporum_f._sp._lycopersici_4286_ 1 1

Fusarium_verticillioides_7600_ 1 1

Trichoderma_asperellum_CBS_433.97_v1.0 1 1

Trichoderma_atroviride_ 1 1

Trichoderma_citrinoviride_v1.0 1 1

Trichoderma_reesei_1.2 1 1

Trichoderma_virens_Gv29-8_ 1 1

Trichoderma_longibrachiatum_ATCC_18648_v1.0 1 1

Trichoderma_harzianum_CBS_226.95_v1.0 1 1

Didymella_exigua_CBS_183.55_v1.0 1 1

Leptosphaeria_maculans_22 1 1

Setosphaeria_turcica_v1.0 1 1

Cochliobolus_miyabeanus_ATCC_44560_v1.0 1 1

Cochliobolus_victoriae_FI3_v1.0 1 1

Cochliobolus_carbonum_26-R-13_v1.0 1 1

Cochliobolus_heterostrophus_ (Southern corn leaf blight pathogen) 1 1

Alternaria_brassicicola_ 1 1

Cochliobolus_lunatus_m118_v2.0 1 1

Pyrenophora_teres_f._teres_22 1 1

Pyrenophora_tritici-repentis_ 1 1

Stagonospora_nodorum_ 1 1

Paracoccidioides_brasiliensis_Pb18_ 1 1

Ajellomyces_dermatitidis_SLH14081_ 1 1

Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1 1

Aspergillus_fumigatus_Af293 1 1

Aspergillus_sydowii_v1.0 1 1

Aspergillus_versicolor_v1.0 1 1

Neosartorya_fischeri_NRRL_181_ 1 1

Aspergillus_terreus_NIH2624_ 1 1

Penicillium_marneffei_ATCC_18224_ 1 1

Dekkera_bruxellensis_CBS_2499_v2.0 1 1

Dictyostelium_discoideum 1 1

Dictyostelium_purpureum_ 1 1

Cyanidioschyzon_merolae_strain_10D_22 1 1

Cyanidioschyzon_merolae 1 1

Thecamonas_trahens_ATCC_50062_ 2 2

Bigelowiella_natans_CCMP2755_22 1 1

Cyanophora_paradoxa_ 1 1

Ectocarpus_siliculosus 1 1

Pythium_iwayamai_DAOM_BR242034_22 1 1

Pythium_arrhenomanes_ATCC_12531_22 1 1

Pythium_ultimum_v1.7-2 1 1

Pythium_aphanidermatum_DAOM_BR444_22 2 2

Pythium_irregulare_DAOM_BR486_22 1 1

Pythium_vexans_DAOM_BR484_22 1 1

Phytophthora_ramorum_1.1 (Sudden oak death agent) 1 1

Phytophthora_sojae_1.1 1 1

Phytophthora_infestans_T30-4_ 1 1

Phaeodactylum_tricornutumCCAP_1055/1 1 1

Thalassiosira_pseudonana_CCMP1335 1 1

Perkinsus_marinus_ATCC_50983_ 1 1

Neospora_caninum 1 1

Toxoplasma_gondii_ME49 1 1

Toxoplasma_gondii_GT1 1 1

Naegleria_gruberi_ 1 1

Emiliania_huxleyi_CCMP1516_ 1 1

Leptolyngbya_sp._PCC_7376 1 1

Pseudanabaena_sp._PCC_7367 2 2

Acaryochloris_marina_MBIC11017 1 1

Synechocystis_sp._PCC_6803 1 1

Synechococcus_sp._PCC_7502 3 1

Microcoleus_sp._PCC_7113 1 1

Trichodesmium_erythraeum_IMS101 1 1

Geitlerinema_sp._PCC_7407 1 1

Gloeocapsa_sp._PCC_7428 1 1

Halothece_sp._PCC_7418 1 1

Gloeobacter_violaceus_PCC_7421 1 1

Rivularia_sp._PCC_7116 1 1

Calothrix_sp._PCC_7507 1 1

Anabaena_variabilis_ATCC_29413 1 1

Nostoc_sp._PCC_7107 1 1

Nostoc_punctiforme_PCC_73102 1 1

Nostoc_sp._PCC_7120 1 1

Nostoc_sp._PCC_7524 1 1

Anabaena_sp._90 1 1

Conexibacter_woesei_DSM_14684 1 1

Eggerthella_sp._YY7918 1 1

Eggerthella_lenta_DSM_2243 1 1

Slackia_heliotrinireducens_DSM_20476 1 1

Acidimicrobium_ferrooxidans_DSM_10331 3 2

Nakamurella_multipartita_DSM_44233 1 1

Acidothermus_cellulolyticus_11B 1 1

Catenulispora_acidiphila_DSM_44928 7 5

Thermomonospora_curvata_DSM_43183 3 3

Kitasatospora_setae_KM-6054 1 1

Streptomyces_coelicolor_A3(2) 1 1

Streptomyces_sp._PAMC26508 1 1

Streptomyces_flavogriseus_ATCC_33331 1 1

Streptomyces_griseus_subsp._griseus_NBRC_13350 1 1

Streptomyces_avermitilis_MA-4680 1 1

Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1

Pseudonocardia_dioxanivorans_CB1190 4 3

Amycolatopsis_mediterranei_U32 3 2

Kribbella_flavida_DSM_17836 1 1

Microlunatus_phosphovorus_NM-1 1 1

Salinispora_arenicola_CNS-205 1 1

Salinispora_tropica_CNB-440 1 1

Verrucosispora_maris_AB-18-032 1 1

Micromonospora_sp._L5 1 1

Micromonospora_aurantiaca_ATCC_27029 1 1

Actinoplanes_sp._SE50/110 3 2

Segniliparus_rotundus_DSM_44985 1 1

Gordonia_polyisoprenivorans_VH2 2 1

Rhodococcus_equi_103S 1 1

Mycobacterium_abscessus_ATCC_19977 1 1

Mycobacterium_canettii_CIPT_140010059 2 1

Mycobacterium_africanum_GM041182 2 1

Mycobacterium_tuberculosis_KZN_1435 2 1

Mycobacterium_tuberculosis 2 1

Mycobacterium_bovis_BCG_str._Pasteur_1173P2 2 1

Mycobacterium_ulcerans_Agy99 3 2

Mycobacterium_marinum_M 3 2

Mycobacterium_leprae_Br4923 1 1

Corynebacterium_resistens_DSM_45100 1 1

Corynebacterium_kroppenstedtii_DSM_44385 1 1

Corynebacterium_ulcerans_0102 1 1

Corynebacterium_jeikeium_K411 1 1

Corynebacterium_variabile_DSM_44702 1 1

Corynebacterium_pseudotuberculosis_316 1 1

Microbacterium_testaceum_StLB037 1 1

Cellulomonas_fimi_ATCC_484 1 1

[Cellvibrio]_gilvus_ATCC_13127 1 1

Arthrobacter_aurescens_TC1 1 1

Arthrobacter_sp._Rue61a 1 1

Renibacterium_salmoninarum_ATCC_33209 1 1

Bifidobacterium_longum_subsp._longum_JDM301 1 1

Bifidobacterium_breve_ACS-071-V-Sch8b 1 1

Bifidobacterium_bifidum_S17 1 1

Actinomyces_sp._F0330 1 1

Caldilinea_aerophila_DSM_14535_=_NBRC_104270 1 1

Dehalococcoides_ethenogenes_195 1 1

Dehalococcoides_sp._BAV1 1 1

Dehalogenimonas_lykanthroporepellens_BL-DC-9 1 1

Anaerolinea_thermophila_UNI-1 1 1

Thermomicrobium_roseum_DSM_5159 1 1

Sphaerobacter_thermophilus_DSM_20745 1 1

Herpetosiphon_aurantiacus_DSM_785 1 1

Truepera_radiovictrix_DSM_17093 2 2

Oceanithermus_profundus_DSM_14977 1 1

Meiothermus_ruber_DSM_1279 1 1

Thermus_sp._CCB_US3_UF1 1 1

Thermus_thermophilus_HB27 2 2

Veillonella_parvula_DSM_2008 1 1

Natranaerobius_thermophilus_JW/NM-WN-LF 1 1

Symbiobacterium_thermophilum_IAM_14863 1 1

Clostridium_clariflavum_DSM_19732 1 1

Clostridium_thermocellum_ATCC_27405 1 1

Ethanoligenens_harbinense_YUAN-3 1 1

Faecalibacterium_prausnitzii 1 1

Ruminococcus_sp. 1 1

Sulfobacillus_acidophilus_DSM_10332 4 3

Oscillibacter_valericigenes_Sjm18-20 1 1

Candidatus_Desulforudis_audaxviator_MP104C 1 1

Thermincola_potens_JR 1 1

Pelotomaculum_thermopropionicum_SI 1 1

Desulfosporosinus_acidiphilus_SJ4 1 1

Desulfosporosinus_orientis_DSM_765 2 2

Dehalobacter_sp._DCA 2 2

Dehalobacter_sp._CF 2 2

Syntrophobotulus_glycolicus_DSM_8271 1 1

Desulfitobacterium_hafniense_Y51 1 1

Desulfitobacterium_dehalogenans_ATCC_51507 1 1

Desulfotomaculum_reducens_MI-1 1 1

Desulfotomaculum_acetoxidans_DSM_771 1 1

Desulfotomaculum_kuznetsovii_DSM_6115 1 1

Desulfotomaculum_carboxydivorans_CO-1-SRB 1 1

Desulfotomaculum_ruminis_DSM_2154 1 1

Eubacterium_limosum_KIST612 1 1

Clostridium_difficile_630 1 1

Clostridium_sticklandii_DSM_519 1 1

Filifactor_alocis_ATCC_35896 1 1

Clostridium_saccharolyticum_WM1 1 1

Clostridium_phytofermentans_ISDg 1 1

[Ruminococcus]_obeum 1 1

Roseburia_intestinalis 1 1

Butyrivibrio_fibrisolvens 1 1

Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 2 2

Alkaliphilus_metalliredigens_QYMF 1 1

Clostridium_novyi_NT 1 1

Clostridium_kluyveri_DSM_555 1 1

Clostridium_tetani_E88 1 1

Clostridium_perfringens_ATCC_13124 1 1

Clostridium_botulinum_A_str._ATCC_3502 2 2

Mahella_australiensis_50-1_BON 1 1

Caldicellulosiruptor_kronotskyensis_2002 1 1

Caldicellulosiruptor_hydrothermalis_108 1 1

Caldicellulosiruptor_owensensis_OL 1 1

Caldicellulosiruptor_lactoaceticus_6A 1 1

Caldicellulosiruptor_kristjanssonii_177R1B 1 1

Caldicellulosiruptor_saccharolyticus_DSM_8903 1 1

Caldicellulosiruptor_bescii_DSM_6725 1 1

Carboxydothermus_hydrogenoformans_Z-2901 1 1

Acetohalobium_arabaticum_DSM_5501 1 1

Carnobacterium_sp._WN1359 1 1

Aerococcus_urinae_ACS-120-V-Col10a 1 1

Tetragenococcus_halophilus_NBRC_12172 1 1

Melissococcus_plutonius_DAT561 1 1

Enterococcus_sp._7L76 1 1

Enterococcus_hirae_ATCC_9790 1 1

Enterococcus_faecium_Aus0004 2 2

Enterococcus_faecalis_62 1 1

Weissella_koreensis_KACC_15510 1 1

Oenococcus_oeni_PSU-1 1 1

Leuconostoc_citreum_KM20 1 1

Lactobacillus_casei_ATCC_334 1 1

Lactobacillus_rhamnosus_Lc_705 1 1

Lactobacillus_johnsonii_FI9785 1 1

Lactobacillus_ruminis_ATCC_27782 2 2

Lactobacillus_fermentum_IFO_3956 1 1

Lactobacillus_sakei_subsp._sakei_23K 1 1

Lactobacillus_reuteri_DSM_20016 1 1

Lactobacillus_gasseri_ATCC_33323 1 1

Lactobacillus_plantarum_JDM1 2 2

Lactobacillus_buchneri_NRRL_B-30929 1 1

Lactobacillus_buchneri 1 1

Lactobacillus_brevis_ATCC_367 2 2

Pediococcus_claussenii_ATCC_BAA-344 2 2

Pediococcus_pentosaceus_ATCC_25745 1 1

Lactococcus_garvieae_ATCC_49156 1 1

Lactococcus_lactis_subsp._cremoris_MG1363 1 1

Streptococcus_oralis_Uo5 2 2

Brevibacillus_brevis_NBRC_100599 2 2

Paenibacillus_sp._JDR-2 2 2

Listeria_welshimeri_serovar_6b_str._SLCC5334 2 2

Listeria_innocua_Clip11262 2 2

Listeria_seeligeri_serovar_1/2b_str._SLCC3954 2 2

Listeria_monocytogenes_serotype_4b_str._CLIP_80459 2 2

Listeria_ivanovii_subsp._ivanovii_PAM_55 2 2

Lysinibacillus_sphaericus_C3-41 1 1

Anoxybacillus_flavithermus_WK1 1 1

Geobacillus_thermoleovorans_CCB_US3_UF5 1 1

Geobacillus_kaustophilus_HTA426 1 1

Geobacillus_thermodenitrificans_NG80-2 1 1

Halobacillus_halophilus_DSM_2266 1 1

Bacillus_amyloliquefaciens_FZB42 1 1

Bacillus_licheniformis_DSM_13_=_ATCC_14580 1 1

Bacillus_halodurans_C-125 2 2

Bacillus_weihenstephanensis_KBAB4 3 3

Bacillus_thuringiensis_str._Al_Hakam 2 2

Bacillus_cereus_03BB102 2 2

Bacillus_anthracis_str._A0248 2 2

Bacillus_pseudofirmus_OF4 1 1

Bacillus_cellulosilyticus_DSM_2522 1 1

Gemmatimonas_aurantiaca_T-27 1 1

Melioribacter_roseus_P3M 1 1

Chloroherpeton_thalassium_ATCC_35110 1 1

Saprospira_grandis_str._Lewin 1 1

Salinibacter_ruber_M8 1 1

Rhodothermus_marinus_DSM_4252 1 1

Flexibacter_litoralis_DSM_6794 1 1

Belliella_baltica_DSM_15883 2 2

Cyclobacterium_marinum_DSM_745 1 1

Fibrella_aestuarina 1 1

Leadbetterella_byssophila_DSM_17132 1 1

Dyadobacter_fermentans_DSM_18053 2 2

Spirosoma_linguale_DSM_74 2 2

Runella_slithyformis_DSM_19594 2 2

Parabacteroides_distasonis_ATCC_8503 1 1

Tannerella_forsythia_ATCC_43037 1 1

Bacteroides_sp._CF50 1 1

Prevotella_intermedia_17 1 1

Prevotella_denticola_F0289 1 1

Prevotella_ruminicola_23 1 1

Bacteroides_salanitronis_DSM_18170 1 1

Bacteroides_helcogenes_P_36-108 1 1

Bacteroides_vulgatus_ATCC_8482 1 1

Bacteroides_thetaiotaomicron_VPI-5482 1 1

Bacteroides_fragilis_YCH46 1 1

Pedobacter_saltans_DSM_12145 1 1

Pedobacter_heparinus_DSM_2366 1 1

Sphingobacterium_sp._21 1 1

Owenweeksia_hongkongensis_DSM_17368 1 1

Krokinobacter_sp._4H-3-7-5 1 1

Lacinutrix_sp._5H-3-7-4 1 1

Cellulophaga_algicola_DSM_14237 1 1

Polaribacter_sp._MED152 1 1

Capnocytophaga_canimorsus_Cc5 1 1

Fibrobacter_succinogenes_subsp._succinogenes_S85 1 1

Isosphaera_pallida_ATCC_43644 1 1

Planctomyces_brasiliensis_DSM_5305 1 1

Rhodopirellula_baltica_SH_1 1 1

Fretibacterium_fastidiosum 1 1

Brachyspira_murdochii_DSM_12563 1 1

Brachyspira_intermedia_PWS/A 2 2

Brachyspira_pilosicoli_95/1000 1 1

Brachyspira_hyodysenteriae_WA1 2 2

Treponema_primitia_ZAS-2 1 1

Spirochaeta_africana_DSM_8902 1 1

Marinitoga_piezophila_KA3 1 1

Kosmotoga_olearia_TBF_19.5.1 1 1

Fervidobacterium_pennivorans_DSM_9078 1 1

Fervidobacterium_nodosum_Rt17-B1 1 1

Thermosipho_melanesiensis_BI429 1 1

Thermosipho_africanus_TCF52B 1 1

Thermotoga_lettingae_TMO 1 1

Thermotoga_thermarum_DSM_5069 1 1

Thermotoga_sp._RQ2 1 1

Thermotoga_naphthophila_RKU-10 1 1

Thermotoga_petrophila_RKU-1 1 1

Thermotoga_neapolitana_DSM_4359 1 1

Thermotoga_maritima_MSB8 1 1

Persephonella_marina_EX-H1 1 1

Dictyoglomus_turgidum_DSM_6724 1 1

Dictyoglomus_thermophilum_H-6-12 1 1

Candidatus_Solibacter_usitatus_Ellin6076 1 1

Granulicella_mallensis_MP5ACTX8 1 1

Candidatus_Koribacter_versatilis_Ellin345 1 1

Terriglobus_saanensis_SP1PR4 1 1

Terriglobus_roseus_DSM_18391 1 1

Leptotrichia_buccalis_C-1013-b 1 1

Ilyobacter_polytropus_DSM_2926 1 1

Candidatus_Methylomirabilis_oxyfera 1 1

Acidithiobacillus_ferrivorans_SS3 5 4

Acidithiobacillus_caldus_SM-1 4 3

Acidithiobacillus_ferrooxidans_ATCC_53993 5 4

Bacteriovorax_marinus_SJ 3 3

Helicobacter_hepaticus_ATCC_51449 1 1

Desulfomonile_tiedjei_DSM_6799 2 2

Desulfovibrio_piezophilus 1 1

Desulfovibrio_aespoeensis_Aspo-2 1 1

Lawsonia_intracellularis_PHE/MN1-00 1 1

Desulfovibrio_magneticus_RS-1 1 1

Desulfovibrio_alaskensis_G20 1 1

Desulfovibrio_vulgaris_subsp._vulgaris_DP4 1 1

Desulfovibrio_salexigens_DSM_2638 1 1

Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 1 1

Desulfovibrio_africanus_str._Walvis_Bay 1 1

Geobacter_daltonii_FRC-32 1 1

Geobacter_sp._M21 1 1

Geobacter_uraniireducens_Rf4 1 1

Geobacter_bemidjiensis_Bem 1 1

Geobacter_sulfurreducens_KN400 3 3

Haliangium_ochraceum_DSM_14365 1 1

Thauera_sp._MZ1T 1 1

Azoarcus_sp._KH32C 1 1

Azoarcus_sp._BH72 1 1

Aromatoleum_aromaticum_EbN1 1 1

Chromobacterium_violaceum_ATCC_12472 1 1

Thiomonas_arsenitoxydans 4 3

Thiomonas_intermedia_K12 3 2

Burkholderia_phytofirmans_PsJN 1 1

Burkholderia_phymatum_STM815 1 1

Burkholderia_xenovorans_LB400 1 1

Ralstonia_solanacearum_CFBP2957 1 1

Burkholderia_thailandensis_E264 1 1

Burkholderia_pseudomallei_1106a 1 1

Burkholderia_mallei_SAVP1 1 1

Burkholderia_ambifaria_AMMD 3 3

Burkholderia_cenocepacia_HI2424 1 1

Burkholderia_multivorans_ATCC_17616 1 1

Burkholderia_vietnamiensis_G4 2 2

Burkholderia_gladioli_BSR3 1 1

Burkholderia_glumae_BGR1 1 1

Delftia_sp._Cs1-4 1 1

Delftia_acidovorans_SPH-1 1 1

Comamonas_testosteroni_CNB-2 1 1

Collimonas_fungivorans_Ter331 4 2

Nitrosospira_multiformis_ATCC_25196 1 1

Nitrosomonas_europaea_ATCC_19718 1 1

Parvularcula_bermudensis_HTCC2503 1 1

Asticcacaulis_excentricus_CB_48 1 1

Brevundimonas_subvibrioides_ATCC_15264 1 1

Caulobacter_sp._K31 2 2

Caulobacter_crescentus_NA1000 1 1

Erythrobacter_litoralis_HTCC2594 1 1

Sphingopyxis_alaskensis_RB2256 1 1

Novosphingobium_sp._PP1Y 1 1

Sphingobium_sp._SYK-6 1 1

Sphingobium_japonicum_UT26S 1 1

Sphingobium_chlorophenolicum_L-1 1 1

Sphingomonas_sp._MM-1 1 1

Maricaulis_maris_MCS10 1 1

Hirschia_baltica_ATCC_49814 1 1

Hyphomonas_neptunium_ATCC_15444 1 1

Dinoroseobacter_shibae_DFL_12 3 3

Phaeobacter_gallaeciensis_2.10 1 1

Pseudovibrio_sp._FO-BEG1 1 1

Ruegeria_sp._TM1040 1 1

Ruegeria_pomeroyi_DSS-3 1 1

Roseobacter_litoralis_Och_149 2 2

Roseobacter_denitrificans_OCh_114 1 1

Rhodobacter_sphaeroides_ATCC_17029 1 1

Paracoccus_denitrificans_PD1222 1 1

Magnetospirillum_magneticum_AMB-1 1 1

Rhodospirillum_centenum_SW 3 3

Rhodospirillum_rubrum_F11 1 1

Azospirillum_lipoferum_4B 1 1

Azospirillum_brasilense_Sp245 2 2

Acidiphilium_multivorum_AIU301 1 1

Acidiphilium_cryptum_JF-5 1 1

Methylobacterium_radiotolerans_JCM_2831 1 1

Methylocella_silvestris_BL2 1 1

Beijerinckia_indica_subsp._indica_ATCC_9039 1 1

Rhodomicrobium_vannielii_ATCC_17100 1 1

Hyphomicrobium_sp._MC1 1 1

Hyphomicrobium_denitrificans_ATCC_51888 1 1

Bradyrhizobium_sp._ORS_278 1 1

Teredinibacter_turnerae_T7901 1 1

Cellvibrio_japonicus_Ueda107 1 1

Aggregatibacter_aphrophilus_NJ8700 1 1

Aggregatibacter_actinomycetemcomitans_D7S-1 1 1

Pasteurella_multocida_subsp._multocida_str._3480 1 1

Haemophilus_parasuis_SH0165 1 1

Haemophilus_ducreyi_35000HP 1 1

Haemophilus_parainfluenzae_T3T1 1 1

Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 1 1

Aeromonas_veronii_B565 1 1

Aeromonas_salmonicida_subsp._salmonicida_A449 2 2

Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 1 1

Vibrio_sp._Ex25 1 1

Vibrio_harveyi_ATCC_BAA-1116 1 1

Vibrio_parahaemolyticus_RIMD_2210633 1 1

Vibrio_splendidus_LGP32 1 1

Vibrio_furnissii_NCTC_11218 1 1

Vibrio_vulnificus_MO6-24/O 1 1

Vibrio_cholerae_O395 1 1

Photobacterium_profundum_SS9 1 1

Psychromonas_ingrahamii_37 1 1

Psychromonas_sp._CNPT3 2 2

Ferrimonas_balearica_DSM_9799 2 2

Shewanella_frigidimarina_NCIMB_400 1 1

Colwellia_psychrerythraea_34H 1 1

Pseudoalteromonas_sp._SM9913 1 1

Pseudoalteromonas_atlantica_T6c 1 1

Pseudoalteromonas_haloplanktis_TAC125 1 1

Glaciecola_sp._4H-3-7+YE-5 1 1

Alteromonas_sp._SN2 1 1

Alteromonas_macleodii_str._'Deep_ecotype' 1 1

Kangiella_koreensis_DSM_16069 1 1

Hahella_chejuensis_KCTC_2396 2 2

Methylomicrobium_alcaliphilum 1 1

Rhodanobacter_denitrificans 1 1

Halorhodospira_halophila_SL1 1 1

Legionella_longbeachae_NSW150 3 1

Legionella_pneumophila_str._Corby 1 1

Xenorhabdus_bovienii_SS-2004 1 1

Xenorhabdus_nematophila_ATCC_19061 1 1

Rahnella_sp._Y9602 1 1

Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 1 1

Serratia_sp._AS12 1 1

Serratia_sp._ATCC_39006 1 1

Serratia_plymuthica_AS9 1 1

Serratia_proteamaculans_568 1 1

Dickeya_dadantii_Ech703 1 1

Dickeya_zeae_Ech1591 1 1

Pectobacterium_wasabiae_WPP163 1 1

Pectobacterium_sp._SCC3193 1 1

Pectobacterium_atrosepticum_SCRI1043 1 1

Pectobacterium_carotovorum_subsp._carotovorum_PC1 1 1

Pantoea_vagans_C9-1 1 1

Pantoea_ananatis_LMG_20103 1 1

Erwinia_tasmaniensis_Et1/99 1 1

Erwinia_sp._Ejp617 1 1

Erwinia_pyrifoliae_Ep1/96 1 1

Erwinia_amylovora_ATCC_49946 1 1

Escherichia_blattae_DSM_4481 1 1

Cronobacter_turicensis_z3032 1 1

Cronobacter_sakazakii_ES15 1 1

Candidatus_Hamiltonella_defensa_5AT_(Acyrthosiphon_pisum) 1 1

Enterobacteriaceae_bacterium_strain_FGI_57 1 1

Shigella_sonnei_Ss046 1 1

Shigella_flexneri_5_str._8401 1 1

Shigella_dysenteriae_Sd197 1 1

Shigella_boydii_CDC_3083-94 1 1

Salmonella_bongori_NCTC_12419 1 1

Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 2 2

Klebsiella_oxytoca_E718 1 1

Escherichia_fergusonii_ATCC_35469 2 2

Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 1 1

Enterobacter_sp._R4-368 1 1

Enterobacter_sp._638 1 1

Enterobacter_asburiae_LF7a 1 1

Enterobacter_cloacae_subsp._dissolvens_SDM 1 1

Citrobacter_rodentium_ICC168 1 1

Citrobacter_koseri_ATCC_BAA-895 1 1

Pseudomonas_sp._UW4 1 1

Pseudomonas_entomophila_L48 1 1

Pseudomonas_putida_F1 1 1

Pseudomonas_protegens_Pf-5 1 1

Pseudomonas_sp._VLB120 1 1

Psychrobacter_sp._G 2 2

Psychrobacter_sp._PRwf-1 2 2

Psychrobacter_arcticus_273-4 2 2

Psychrobacter_cryohalolentis_K5 2 2

Moraxella_catarrhalis_RH4 2 2

Acinetobacter_oleivorans_DR1 2 2

Acinetobacter_calcoaceticus_PHEA-2 2 2

Acinetobacter_baumannii_ATCC_17978 2 2

Acinetobacter_sp._ADP1 3 3

Francisella_noatunensis_subsp._orientalis_str._Toba_04 1 1

Francisella_sp._TX077308 1 1

Francisella_philomiragia_subsp._philomiragia_ATCC_25017 1 1

Francisella_tularensis_subsp._tularensis_WY96-3418 1 1

Francisella_cf._novicida_3523 1 1

Francisella_novicida_U112 1 1

Acidilobus_saccharovorans_345-15 1 1

Hyperthermus_butylicus_DSM_5456 1 1

Staphylothermus_hellenicus_DSM_12710 1 1

Staphylothermus_marinus_F1 1 1

Acidianus_hospitalis_W1 1 1

Sulfolobus_tokodaii_str._7 1 1

Sulfolobus_islandicus_Y.N.15.51 1 1

Sulfolobus_solfataricus_P2 1 1

Thermofilum_pendens_Hrk_5 1 1

Caldivirga_maquilingensis_IC-167 1 1

Pyrobaculum_sp._1860 1 1

Thermoproteus_uzoniensis_768-20 1 1

Methanocella_arvoryzae_MRE50 1 1

Methanocella_conradii_HZ254 1 1

Methanocella_paludicola_SANAE 1 1

Methanosaeta_harundinacea_6Ac 1 1

Methanosarcina_acetivorans_C2A 1 1

Methanohalophilus_mahii_DSM_5219 1 1

Methanosphaerula_palustris_E1-9c 1 1

Methanoregula_boonei_6A8 1 1

Methanoculleus_bourgensis_MS2 1 1

Methanoculleus_marisnigri_JR1 1 1

Archaeoglobus_veneficus_SNP6 1 1

Archaeoglobus_fulgidus_DSM_4304 1 1

Thermococcus_sp._4557 1 1

Thermococcus_onnurineus_NA1 1 1

Thermococcus_kodakarensis_KOD1 1 1

Thermococcus_gammatolerans_EJ3 1 1

Thermococcus_sibiricus_MM_739 1 1

Thermococcus_barophilus_MP 1 1

Pyrococcus_sp._ST04 1 1

Pyrococcus_yayanosii_CH1 1 1

Pyrococcus_horikoshii_OT3 1 1

Pyrococcus_abyssi_GE5 1 1

Pyrococcus_furiosus_COM1 1 1

Thermoplasma_volcanium_GSS1 1 1

Thermoplasma_acidophilum_DSM_1728 1 1

Picrophilus_torridus_DSM_9790 1 1

Halopiger_xanaduensis_SH-6 1 1

Natrinema_sp._J7-2 1 1

Halorubrum_lacusprofundi_ATCC_49239 1 1

Halogeometricum_borinquense_DSM_11551 2 2

Haloferax_mediterranei_ATCC_33500 1 1

Haloferax_volcanii_DS2 1 1

Halorhabdus_utahensis_DSM_12940 1 1

Natronomonas_pharaonis_DSM_2160 1 1

Halobacterium_salinarum_R1 1 1

Halobacterium_sp._NRC-1 1 1

Methanocaldococcus_sp._FS406-22 1 1

Methanocaldococcus_fervens_AG86 1 1

Methanocaldococcus_vulcanius_M7 1 1

methanocaldococcus_infernus_ME 1 1

Methanocaldococcus_jannaschii_DSM_2661 2 2

Methanothermococcus_okinawensis_IH1 1 1

Methanococcus_aeolicus_Nankai-3 1 1

Methanococcus_maripaludis_C5 1 1

Methanococcus_voltae_A3 1 1

Methanococcus_vannielii_SB 1 1

Methanothermus_fervidus_DSM_2088 1 1

Methanothermobacter_marburgensis_str._Marburg 3 3

Methanothermobacter_thermautotrophicus_str._Delta_H 3 3

Methanosphaera_stadtmanae_DSM_3091 3 3

Methanobrevibacter_sp._AbM4 3 3

Methanobrevibacter_ruminantium_M1 3 3

Methanobrevibacter_smithii_ATCC_35061 3 3

Complete_genome_sequence_of_Methanobacterium_sp._Mb1 3 3

Acholeplasma_laidlawii_PG-8A 1 1

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Longest transcript per gene
Genome Number Proteins

Sus_scrofa_69_10.2 (Pig) 1 1

Tetraodon_nigroviridis_69_8 (Spotted green pufferfish) 1 1

Takifugu_rubripes_69_4 (Torafugu) 1 1

Oryzias_latipes_69_1 (Japanese medaka) 1 1

Xiphophorus_maculatus_69_4.4.2 (Southern platyfish) 1 1

Oreochromis_niloticus_69_1.0 (Nile tilapia) 1 1

Others
Genome Number Proteins

Homo_sapiens_75_37_(old_version_GRC) (Human) 1 1

Wuchereria_bancrofti_v1.0_(Request) (Agent of lymphatic filariasis) 1 1

Brugia_malayi_v1.0_(Duplicate) (Agent of lymphatic filariasis) 1 1

Acholeplasma_laidlawii_PG-8A_(duplicate) 1 1

Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 2 1

Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 1 1

NCBI_plasmid_sequences_(Plasmids) 29 29

Protein_Data_Bank_(all_PDB_sequenc) 20 20

PDB_chains_(SCOP_1.75)_(PDB) 2 2

Protozoadb_2010_08_(Protozoadb) 2 2

TargetDB__(Targets) 44 44

SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 59 59

NCBI_viral_sequences_(Viral) 2 2

STRING_v9.0.5_(STRING) 564 549

Uniprot_2018_03_genome 12243 11866

NCBI_2017_08_genome 64276 61015

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Domain combinations for YbjQ-like superfamily in groups of genomes