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Domain combinations for YbjQ-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a YbjQ-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   1 1
Sus_scrofa_76_10.2   (Pig)   1 1
Xenopus_laevis_   (African clawed frog)   1 1
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   2 2
Takifugu_rubripes_76_4   (Torafugu)   3 3
Oryzias_latipes_76_1   (Japanese medaka)   1 1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   1 1
Poecilia_formosa_76   (Amazon molly)   1 1
Oreochromis_niloticus_76_1.0   (Nile tilapia)   2 2
Danio_rerio_76_9   (Zebrafish)   1 1
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   2 2
Lucilia_cuprina   (Australian sheep blowfly)   2 2
Pristionchus_pacificus_ 1 1
Onchocerca_volvulus_22 1 1
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   1 1
Caenorhabditis_remanei_ 1 1
Echinococcus_multilocularis_ 1 1
Echinococcus_granulosus_ 1 1
Hydra_vulgaris 1 1
Monosiga_brevicollis_ 1 1
Capsaspora_owczarzaki_ATCC_30864_ 1 1
Mortierella_verticillata_NRRL_6337_ 2 2
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1 1
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 3 3
Melampsora_laricis-populina_ 2 2
Microbotryum_violaceum_22 1 1
Wallemia_sebi_v1.0 2 2
Daldinia_eschscholzii_EC12_v1.0 2 2
Apiospora_montagnei_NRRL_25634_v1.0 2 2
Magnaporthe_poae_ATCC_64411_22 1 1
Magnaporthe_grisea_70-15_ 2 2
Podospora_anserina_ 1 1
Sporotrichum_thermophile_ATCC_42464_ 1 1
Chaetomium_globosum_CBS_148.51_ 1 1
Cryphonectria_parasitica_   (Chestnut blight fungus)   1 1
Verticillium_albo-atrum_VaMs.102_ 1 1
Verticillium_dahliae_VdLs.17_ 1 1
Acremonium_alcalophilumv_1.0 1 1
Fusarium_graminearum_ 1 1
Nectria_haematococca_mpVI_ 1 1
Fusarium_oxysporum_f._sp._lycopersici_4286_ 1 1
Fusarium_verticillioides_7600_ 1 1
Trichoderma_asperellum_CBS_433.97_v1.0 1 1
Trichoderma_atroviride_ 1 1
Trichoderma_citrinoviride_v1.0 1 1
Trichoderma_reesei_1.2 1 1
Trichoderma_virens_Gv29-8_ 1 1
Trichoderma_longibrachiatum_ATCC_18648_v1.0 1 1
Trichoderma_harzianum_CBS_226.95_v1.0 1 1
Didymella_exigua_CBS_183.55_v1.0 1 1
Leptosphaeria_maculans_22 1 1
Setosphaeria_turcica_v1.0 1 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 1 1
Cochliobolus_victoriae_FI3_v1.0 1 1
Cochliobolus_carbonum_26-R-13_v1.0 1 1
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   1 1
Alternaria_brassicicola_ 1 1
Cochliobolus_lunatus_m118_v2.0 1 1
Pyrenophora_teres_f._teres_22 1 1
Pyrenophora_tritici-repentis_ 1 1
Stagonospora_nodorum_ 1 1
Paracoccidioides_brasiliensis_Pb18_ 1 1
Ajellomyces_dermatitidis_SLH14081_ 1 1
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1 1
Aspergillus_fumigatus_Af293 1 1
Aspergillus_sydowii_v1.0 1 1
Aspergillus_versicolor_v1.0 1 1
Neosartorya_fischeri_NRRL_181_ 1 1
Aspergillus_terreus_NIH2624_ 1 1
Penicillium_marneffei_ATCC_18224_ 1 1
Dekkera_bruxellensis_CBS_2499_v2.0 1 1
Dictyostelium_discoideum 1 1
Dictyostelium_purpureum_ 1 1
Cyanidioschyzon_merolae_strain_10D_22 1 1
Cyanidioschyzon_merolae 1 1
Thecamonas_trahens_ATCC_50062_ 2 2
Bigelowiella_natans_CCMP2755_22 1 1
Cyanophora_paradoxa_ 1 1
Ectocarpus_siliculosus 1 1
Pythium_iwayamai_DAOM_BR242034_22 1 1
Pythium_arrhenomanes_ATCC_12531_22 1 1
Pythium_ultimum_v1.7-2 1 1
Pythium_aphanidermatum_DAOM_BR444_22 2 2
Pythium_irregulare_DAOM_BR486_22 1 1
Pythium_vexans_DAOM_BR484_22 1 1
Phytophthora_ramorum_1.1   (Sudden oak death agent)   1 1
Phytophthora_sojae_1.1 1 1
Phytophthora_infestans_T30-4_ 1 1
Phaeodactylum_tricornutumCCAP_1055/1 1 1
Thalassiosira_pseudonana_CCMP1335 1 1
Perkinsus_marinus_ATCC_50983_ 1 1
Neospora_caninum 1 1
Toxoplasma_gondii_ME49 1 1
Toxoplasma_gondii_GT1 1 1
Naegleria_gruberi_ 1 1
Emiliania_huxleyi_CCMP1516_ 1 1
Leptolyngbya_sp._PCC_7376 1 1
Pseudanabaena_sp._PCC_7367 2 2
Acaryochloris_marina_MBIC11017 1 1
Synechocystis_sp._PCC_6803 1 1
Synechococcus_sp._PCC_7502 3 1
Microcoleus_sp._PCC_7113 1 1
Trichodesmium_erythraeum_IMS101 1 1
Geitlerinema_sp._PCC_7407 1 1
Gloeocapsa_sp._PCC_7428 1 1
Halothece_sp._PCC_7418 1 1
Gloeobacter_violaceus_PCC_7421 1 1
Rivularia_sp._PCC_7116 1 1
Calothrix_sp._PCC_7507 1 1
Anabaena_variabilis_ATCC_29413 1 1
Nostoc_sp._PCC_7107 1 1
Nostoc_punctiforme_PCC_73102 1 1
Nostoc_sp._PCC_7120 1 1
Nostoc_sp._PCC_7524 1 1
Anabaena_sp._90 1 1
Conexibacter_woesei_DSM_14684 1 1
Eggerthella_sp._YY7918 1 1
Eggerthella_lenta_DSM_2243 1 1
Slackia_heliotrinireducens_DSM_20476 1 1
Acidimicrobium_ferrooxidans_DSM_10331 3 2
Nakamurella_multipartita_DSM_44233 1 1
Acidothermus_cellulolyticus_11B 1 1
Catenulispora_acidiphila_DSM_44928 7 5
Thermomonospora_curvata_DSM_43183 3 3
Kitasatospora_setae_KM-6054 1 1
Streptomyces_coelicolor_A3(2) 1 1
Streptomyces_sp._PAMC26508 1 1
Streptomyces_flavogriseus_ATCC_33331 1 1
Streptomyces_griseus_subsp._griseus_NBRC_13350 1 1
Streptomyces_avermitilis_MA-4680 1 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1
Pseudonocardia_dioxanivorans_CB1190 4 3
Amycolatopsis_mediterranei_U32 3 2
Kribbella_flavida_DSM_17836 1 1
Microlunatus_phosphovorus_NM-1 1 1
Salinispora_arenicola_CNS-205 1 1
Salinispora_tropica_CNB-440 1 1
Verrucosispora_maris_AB-18-032 1 1
Micromonospora_sp._L5 1 1
Micromonospora_aurantiaca_ATCC_27029 1 1
Actinoplanes_sp._SE50/110 3 2
Segniliparus_rotundus_DSM_44985 1 1
Gordonia_polyisoprenivorans_VH2 2 1
Rhodococcus_equi_103S 1 1
Mycobacterium_abscessus_ATCC_19977 1 1
Mycobacterium_canettii_CIPT_140010059 2 1
Mycobacterium_africanum_GM041182 2 1
Mycobacterium_tuberculosis_KZN_1435 2 1
Mycobacterium_tuberculosis 2 1
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 2 1
Mycobacterium_ulcerans_Agy99 3 2
Mycobacterium_marinum_M 3 2
Mycobacterium_leprae_Br4923 1 1
Corynebacterium_resistens_DSM_45100 1 1
Corynebacterium_kroppenstedtii_DSM_44385 1 1
Corynebacterium_ulcerans_0102 1 1
Corynebacterium_jeikeium_K411 1 1
Corynebacterium_variabile_DSM_44702 1 1
Corynebacterium_pseudotuberculosis_316 1 1
Microbacterium_testaceum_StLB037 1 1
Cellulomonas_fimi_ATCC_484 1 1
[Cellvibrio]_gilvus_ATCC_13127 1 1
Arthrobacter_aurescens_TC1 1 1
Arthrobacter_sp._Rue61a 1 1
Renibacterium_salmoninarum_ATCC_33209 1 1
Bifidobacterium_longum_subsp._longum_JDM301 1 1
Bifidobacterium_breve_ACS-071-V-Sch8b 1 1
Bifidobacterium_bifidum_S17 1 1
Actinomyces_sp._F0330 1 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 1 1
Dehalococcoides_ethenogenes_195 1 1
Dehalococcoides_sp._BAV1 1 1
Dehalogenimonas_lykanthroporepellens_BL-DC-9 1 1
Anaerolinea_thermophila_UNI-1 1 1
Thermomicrobium_roseum_DSM_5159 1 1
Sphaerobacter_thermophilus_DSM_20745 1 1
Herpetosiphon_aurantiacus_DSM_785 1 1
Truepera_radiovictrix_DSM_17093 2 2
Oceanithermus_profundus_DSM_14977 1 1
Meiothermus_ruber_DSM_1279 1 1
Thermus_sp._CCB_US3_UF1 1 1
Thermus_thermophilus_HB27 2 2
Veillonella_parvula_DSM_2008 1 1
Natranaerobius_thermophilus_JW/NM-WN-LF 1 1
Symbiobacterium_thermophilum_IAM_14863 1 1
Clostridium_clariflavum_DSM_19732 1 1
Clostridium_thermocellum_ATCC_27405 1 1
Ethanoligenens_harbinense_YUAN-3 1 1
Faecalibacterium_prausnitzii 1 1
Ruminococcus_sp. 1 1
Sulfobacillus_acidophilus_DSM_10332 4 3
Oscillibacter_valericigenes_Sjm18-20 1 1
Candidatus_Desulforudis_audaxviator_MP104C 1 1
Thermincola_potens_JR 1 1
Pelotomaculum_thermopropionicum_SI 1 1
Desulfosporosinus_acidiphilus_SJ4 1 1
Desulfosporosinus_orientis_DSM_765 2 2
Dehalobacter_sp._DCA 2 2
Dehalobacter_sp._CF 2 2
Syntrophobotulus_glycolicus_DSM_8271 1 1
Desulfitobacterium_hafniense_Y51 1 1
Desulfitobacterium_dehalogenans_ATCC_51507 1 1
Desulfotomaculum_reducens_MI-1 1 1
Desulfotomaculum_acetoxidans_DSM_771 1 1
Desulfotomaculum_kuznetsovii_DSM_6115 1 1
Desulfotomaculum_carboxydivorans_CO-1-SRB 1 1
Desulfotomaculum_ruminis_DSM_2154 1 1
Eubacterium_limosum_KIST612 1 1
Clostridium_difficile_630 1 1
Clostridium_sticklandii_DSM_519 1 1
Filifactor_alocis_ATCC_35896 1 1
Clostridium_saccharolyticum_WM1 1 1
Clostridium_phytofermentans_ISDg 1 1
[Ruminococcus]_obeum 1 1
Roseburia_intestinalis 1 1
Butyrivibrio_fibrisolvens 1 1
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 2 2
Alkaliphilus_metalliredigens_QYMF 1 1
Clostridium_novyi_NT 1 1
Clostridium_kluyveri_DSM_555 1 1
Clostridium_tetani_E88 1 1
Clostridium_perfringens_ATCC_13124 1 1
Clostridium_botulinum_A_str._ATCC_3502 2 2
Mahella_australiensis_50-1_BON 1 1
Caldicellulosiruptor_kronotskyensis_2002 1 1
Caldicellulosiruptor_hydrothermalis_108 1 1
Caldicellulosiruptor_owensensis_OL 1 1
Caldicellulosiruptor_lactoaceticus_6A 1 1
Caldicellulosiruptor_kristjanssonii_177R1B 1 1
Caldicellulosiruptor_saccharolyticus_DSM_8903 1 1
Caldicellulosiruptor_bescii_DSM_6725 1 1
Carboxydothermus_hydrogenoformans_Z-2901 1 1
Acetohalobium_arabaticum_DSM_5501 1 1
Carnobacterium_sp._WN1359 1 1
Aerococcus_urinae_ACS-120-V-Col10a 1 1
Tetragenococcus_halophilus_NBRC_12172 1 1
Melissococcus_plutonius_DAT561 1 1
Enterococcus_sp._7L76 1 1
Enterococcus_hirae_ATCC_9790 1 1
Enterococcus_faecium_Aus0004 2 2
Enterococcus_faecalis_62 1 1
Weissella_koreensis_KACC_15510 1 1
Oenococcus_oeni_PSU-1 1 1
Leuconostoc_citreum_KM20 1 1
Lactobacillus_casei_ATCC_334 1 1
Lactobacillus_rhamnosus_Lc_705 1 1
Lactobacillus_johnsonii_FI9785 1 1
Lactobacillus_ruminis_ATCC_27782 2 2
Lactobacillus_fermentum_IFO_3956 1 1
Lactobacillus_sakei_subsp._sakei_23K 1 1
Lactobacillus_reuteri_DSM_20016 1 1
Lactobacillus_gasseri_ATCC_33323 1 1
Lactobacillus_plantarum_JDM1 2 2
Lactobacillus_buchneri_NRRL_B-30929 1 1
Lactobacillus_buchneri 1 1
Lactobacillus_brevis_ATCC_367 2 2
Pediococcus_claussenii_ATCC_BAA-344 2 2
Pediococcus_pentosaceus_ATCC_25745 1 1
Lactococcus_garvieae_ATCC_49156 1 1
Lactococcus_lactis_subsp._cremoris_MG1363 1 1
Streptococcus_oralis_Uo5 2 2
Brevibacillus_brevis_NBRC_100599 2 2
Paenibacillus_sp._JDR-2 2 2
Listeria_welshimeri_serovar_6b_str._SLCC5334 2 2
Listeria_innocua_Clip11262 2 2
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 2 2
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 2 2
Listeria_ivanovii_subsp._ivanovii_PAM_55 2 2
Lysinibacillus_sphaericus_C3-41 1 1
Anoxybacillus_flavithermus_WK1 1 1
Geobacillus_thermoleovorans_CCB_US3_UF5 1 1
Geobacillus_kaustophilus_HTA426 1 1
Geobacillus_thermodenitrificans_NG80-2 1 1
Halobacillus_halophilus_DSM_2266 1 1
Bacillus_amyloliquefaciens_FZB42 1 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 1 1
Bacillus_halodurans_C-125 2 2
Bacillus_weihenstephanensis_KBAB4 3 3
Bacillus_thuringiensis_str._Al_Hakam 2 2
Bacillus_cereus_03BB102 2 2
Bacillus_anthracis_str._A0248 2 2
Bacillus_pseudofirmus_OF4 1 1
Bacillus_cellulosilyticus_DSM_2522 1 1
Gemmatimonas_aurantiaca_T-27 1 1
Melioribacter_roseus_P3M 1 1
Chloroherpeton_thalassium_ATCC_35110 1 1
Saprospira_grandis_str._Lewin 1 1
Salinibacter_ruber_M8 1 1
Rhodothermus_marinus_DSM_4252 1 1
Flexibacter_litoralis_DSM_6794 1 1
Belliella_baltica_DSM_15883 2 2
Cyclobacterium_marinum_DSM_745 1 1
Fibrella_aestuarina 1 1
Leadbetterella_byssophila_DSM_17132 1 1
Dyadobacter_fermentans_DSM_18053 2 2
Spirosoma_linguale_DSM_74 2 2
Runella_slithyformis_DSM_19594 2 2
Parabacteroides_distasonis_ATCC_8503 1 1
Tannerella_forsythia_ATCC_43037 1 1
Bacteroides_sp._CF50 1 1
Prevotella_intermedia_17 1 1
Prevotella_denticola_F0289 1 1
Prevotella_ruminicola_23 1 1
Bacteroides_salanitronis_DSM_18170 1 1
Bacteroides_helcogenes_P_36-108 1 1
Bacteroides_vulgatus_ATCC_8482 1 1
Bacteroides_thetaiotaomicron_VPI-5482 1 1
Bacteroides_fragilis_YCH46 1 1
Pedobacter_saltans_DSM_12145 1 1
Pedobacter_heparinus_DSM_2366 1 1
Sphingobacterium_sp._21 1 1
Owenweeksia_hongkongensis_DSM_17368 1 1
Krokinobacter_sp._4H-3-7-5 1 1
Lacinutrix_sp._5H-3-7-4 1 1
Cellulophaga_algicola_DSM_14237 1 1
Polaribacter_sp._MED152 1 1
Capnocytophaga_canimorsus_Cc5 1 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 1 1
Isosphaera_pallida_ATCC_43644 1 1
Planctomyces_brasiliensis_DSM_5305 1 1
Rhodopirellula_baltica_SH_1 1 1
Fretibacterium_fastidiosum 1 1
Brachyspira_murdochii_DSM_12563 1 1
Brachyspira_intermedia_PWS/A 2 2
Brachyspira_pilosicoli_95/1000 1 1
Brachyspira_hyodysenteriae_WA1 2 2
Treponema_primitia_ZAS-2 1 1
Spirochaeta_africana_DSM_8902 1 1
Marinitoga_piezophila_KA3 1 1
Kosmotoga_olearia_TBF_19.5.1 1 1
Fervidobacterium_pennivorans_DSM_9078 1 1
Fervidobacterium_nodosum_Rt17-B1 1 1
Thermosipho_melanesiensis_BI429 1 1
Thermosipho_africanus_TCF52B 1 1
Thermotoga_lettingae_TMO 1 1
Thermotoga_thermarum_DSM_5069 1 1
Thermotoga_sp._RQ2 1 1
Thermotoga_naphthophila_RKU-10 1 1
Thermotoga_petrophila_RKU-1 1 1
Thermotoga_neapolitana_DSM_4359 1 1
Thermotoga_maritima_MSB8 1 1
Persephonella_marina_EX-H1 1 1
Dictyoglomus_turgidum_DSM_6724 1 1
Dictyoglomus_thermophilum_H-6-12 1 1
Candidatus_Solibacter_usitatus_Ellin6076 1 1
Granulicella_mallensis_MP5ACTX8 1 1
Candidatus_Koribacter_versatilis_Ellin345 1 1
Terriglobus_saanensis_SP1PR4 1 1
Terriglobus_roseus_DSM_18391 1 1
Leptotrichia_buccalis_C-1013-b 1 1
Ilyobacter_polytropus_DSM_2926 1 1
Candidatus_Methylomirabilis_oxyfera 1 1
Acidithiobacillus_ferrivorans_SS3 5 4
Acidithiobacillus_caldus_SM-1 4 3
Acidithiobacillus_ferrooxidans_ATCC_53993 5 4
Bacteriovorax_marinus_SJ 3 3
Helicobacter_hepaticus_ATCC_51449 1 1
Desulfomonile_tiedjei_DSM_6799 2 2
Desulfovibrio_piezophilus 1 1
Desulfovibrio_aespoeensis_Aspo-2 1 1
Lawsonia_intracellularis_PHE/MN1-00 1 1
Desulfovibrio_magneticus_RS-1 1 1
Desulfovibrio_alaskensis_G20 1 1
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 1 1
Desulfovibrio_salexigens_DSM_2638 1 1
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 1 1
Desulfovibrio_africanus_str._Walvis_Bay 1 1
Geobacter_daltonii_FRC-32 1 1
Geobacter_sp._M21 1 1
Geobacter_uraniireducens_Rf4 1 1
Geobacter_bemidjiensis_Bem 1 1
Geobacter_sulfurreducens_KN400 3 3
Haliangium_ochraceum_DSM_14365 1 1
Thauera_sp._MZ1T 1 1
Azoarcus_sp._KH32C 1 1
Azoarcus_sp._BH72 1 1
Aromatoleum_aromaticum_EbN1 1 1
Chromobacterium_violaceum_ATCC_12472 1 1
Thiomonas_arsenitoxydans 4 3
Thiomonas_intermedia_K12 3 2
Burkholderia_phytofirmans_PsJN 1 1
Burkholderia_phymatum_STM815 1 1
Burkholderia_xenovorans_LB400 1 1
Ralstonia_solanacearum_CFBP2957 1 1
Burkholderia_thailandensis_E264 1 1
Burkholderia_pseudomallei_1106a 1 1
Burkholderia_mallei_SAVP1 1 1
Burkholderia_ambifaria_AMMD 3 3
Burkholderia_cenocepacia_HI2424 1 1
Burkholderia_multivorans_ATCC_17616 1 1
Burkholderia_vietnamiensis_G4 2 2
Burkholderia_gladioli_BSR3 1 1
Burkholderia_glumae_BGR1 1 1
Delftia_sp._Cs1-4 1 1
Delftia_acidovorans_SPH-1 1 1
Comamonas_testosteroni_CNB-2 1 1
Collimonas_fungivorans_Ter331 4 2
Nitrosospira_multiformis_ATCC_25196 1 1
Nitrosomonas_europaea_ATCC_19718 1 1
Parvularcula_bermudensis_HTCC2503 1 1
Asticcacaulis_excentricus_CB_48 1 1
Brevundimonas_subvibrioides_ATCC_15264 1 1
Caulobacter_sp._K31 2 2
Caulobacter_crescentus_NA1000 1 1
Erythrobacter_litoralis_HTCC2594 1 1
Sphingopyxis_alaskensis_RB2256 1 1
Novosphingobium_sp._PP1Y 1 1
Sphingobium_sp._SYK-6 1 1
Sphingobium_japonicum_UT26S 1 1
Sphingobium_chlorophenolicum_L-1 1 1
Sphingomonas_sp._MM-1 1 1
Maricaulis_maris_MCS10 1 1
Hirschia_baltica_ATCC_49814 1 1
Hyphomonas_neptunium_ATCC_15444 1 1
Dinoroseobacter_shibae_DFL_12 3 3
Phaeobacter_gallaeciensis_2.10 1 1
Pseudovibrio_sp._FO-BEG1 1 1
Ruegeria_sp._TM1040 1 1
Ruegeria_pomeroyi_DSS-3 1 1
Roseobacter_litoralis_Och_149 2 2
Roseobacter_denitrificans_OCh_114 1 1
Rhodobacter_sphaeroides_ATCC_17029 1 1
Paracoccus_denitrificans_PD1222 1 1
Magnetospirillum_magneticum_AMB-1 1 1
Rhodospirillum_centenum_SW 3 3
Rhodospirillum_rubrum_F11 1 1
Azospirillum_lipoferum_4B 1 1
Azospirillum_brasilense_Sp245 2 2
Acidiphilium_multivorum_AIU301 1 1
Acidiphilium_cryptum_JF-5 1 1
Methylobacterium_radiotolerans_JCM_2831 1 1
Methylocella_silvestris_BL2 1 1
Beijerinckia_indica_subsp._indica_ATCC_9039 1 1
Rhodomicrobium_vannielii_ATCC_17100 1 1
Hyphomicrobium_sp._MC1 1 1
Hyphomicrobium_denitrificans_ATCC_51888 1 1
Bradyrhizobium_sp._ORS_278 1 1
Teredinibacter_turnerae_T7901 1 1
Cellvibrio_japonicus_Ueda107 1 1
Aggregatibacter_aphrophilus_NJ8700 1 1
Aggregatibacter_actinomycetemcomitans_D7S-1 1 1
Pasteurella_multocida_subsp._multocida_str._3480 1 1
Haemophilus_parasuis_SH0165 1 1
Haemophilus_ducreyi_35000HP 1 1
Haemophilus_parainfluenzae_T3T1 1 1
Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 1 1
Aeromonas_veronii_B565 1 1
Aeromonas_salmonicida_subsp._salmonicida_A449 2 2
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 1 1
Vibrio_sp._Ex25 1 1
Vibrio_harveyi_ATCC_BAA-1116 1 1
Vibrio_parahaemolyticus_RIMD_2210633 1 1
Vibrio_splendidus_LGP32 1 1
Vibrio_furnissii_NCTC_11218 1 1
Vibrio_vulnificus_MO6-24/O 1 1
Vibrio_cholerae_O395 1 1
Photobacterium_profundum_SS9 1 1
Psychromonas_ingrahamii_37 1 1
Psychromonas_sp._CNPT3 2 2
Ferrimonas_balearica_DSM_9799 2 2
Shewanella_frigidimarina_NCIMB_400 1 1
Colwellia_psychrerythraea_34H 1 1
Pseudoalteromonas_sp._SM9913 1 1
Pseudoalteromonas_atlantica_T6c 1 1
Pseudoalteromonas_haloplanktis_TAC125 1 1
Glaciecola_sp._4H-3-7+YE-5 1 1
Alteromonas_sp._SN2 1 1
Alteromonas_macleodii_str._'Deep_ecotype' 1 1
Kangiella_koreensis_DSM_16069 1 1
Hahella_chejuensis_KCTC_2396 2 2
Methylomicrobium_alcaliphilum 1 1
Rhodanobacter_denitrificans 1 1
Halorhodospira_halophila_SL1 1 1
Legionella_longbeachae_NSW150 3 1
Legionella_pneumophila_str._Corby 1 1
Xenorhabdus_bovienii_SS-2004 1 1
Xenorhabdus_nematophila_ATCC_19061 1 1
Rahnella_sp._Y9602 1 1
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 1 1
Serratia_sp._AS12 1 1
Serratia_sp._ATCC_39006 1 1
Serratia_plymuthica_AS9 1 1
Serratia_proteamaculans_568 1 1
Dickeya_dadantii_Ech703 1 1
Dickeya_zeae_Ech1591 1 1
Pectobacterium_wasabiae_WPP163 1 1
Pectobacterium_sp._SCC3193 1 1
Pectobacterium_atrosepticum_SCRI1043 1 1
Pectobacterium_carotovorum_subsp._carotovorum_PC1 1 1
Pantoea_vagans_C9-1 1 1
Pantoea_ananatis_LMG_20103 1 1
Erwinia_tasmaniensis_Et1/99 1 1
Erwinia_sp._Ejp617 1 1
Erwinia_pyrifoliae_Ep1/96 1 1
Erwinia_amylovora_ATCC_49946 1 1
Escherichia_blattae_DSM_4481 1 1
Cronobacter_turicensis_z3032 1 1
Cronobacter_sakazakii_ES15 1 1
Candidatus_Hamiltonella_defensa_5AT_(Acyrthosiphon_pisum) 1 1
Enterobacteriaceae_bacterium_strain_FGI_57 1 1
Shigella_sonnei_Ss046 1 1
Shigella_flexneri_5_str._8401 1 1
Shigella_dysenteriae_Sd197 1 1
Shigella_boydii_CDC_3083-94 1 1
Salmonella_bongori_NCTC_12419 1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 2 2
Klebsiella_oxytoca_E718 1 1
Escherichia_fergusonii_ATCC_35469 2 2
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 1 1
Enterobacter_sp._R4-368 1 1
Enterobacter_sp._638 1 1
Enterobacter_asburiae_LF7a 1 1
Enterobacter_cloacae_subsp._dissolvens_SDM 1 1
Citrobacter_rodentium_ICC168 1 1
Citrobacter_koseri_ATCC_BAA-895 1 1
Pseudomonas_sp._UW4 1 1
Pseudomonas_entomophila_L48 1 1
Pseudomonas_putida_F1 1 1
Pseudomonas_protegens_Pf-5 1 1
Pseudomonas_sp._VLB120 1 1
Psychrobacter_sp._G 2 2
Psychrobacter_sp._PRwf-1 2 2
Psychrobacter_arcticus_273-4 2 2
Psychrobacter_cryohalolentis_K5 2 2
Moraxella_catarrhalis_RH4 2 2
Acinetobacter_oleivorans_DR1 2 2
Acinetobacter_calcoaceticus_PHEA-2 2 2
Acinetobacter_baumannii_ATCC_17978 2 2
Acinetobacter_sp._ADP1 3 3
Francisella_noatunensis_subsp._orientalis_str._Toba_04 1 1
Francisella_sp._TX077308 1 1
Francisella_philomiragia_subsp._philomiragia_ATCC_25017 1 1
Francisella_tularensis_subsp._tularensis_WY96-3418 1 1
Francisella_cf._novicida_3523 1 1
Francisella_novicida_U112 1 1
Acidilobus_saccharovorans_345-15 1 1
Hyperthermus_butylicus_DSM_5456 1 1
Staphylothermus_hellenicus_DSM_12710 1 1
Staphylothermus_marinus_F1 1 1
Acidianus_hospitalis_W1 1 1
Sulfolobus_tokodaii_str._7 1 1
Sulfolobus_islandicus_Y.N.15.51 1 1
Sulfolobus_solfataricus_P2 1 1
Thermofilum_pendens_Hrk_5 1 1
Caldivirga_maquilingensis_IC-167 1 1
Pyrobaculum_sp._1860 1 1
Thermoproteus_uzoniensis_768-20 1 1
Methanocella_arvoryzae_MRE50 1 1
Methanocella_conradii_HZ254 1 1
Methanocella_paludicola_SANAE 1 1
Methanosaeta_harundinacea_6Ac 1 1
Methanosarcina_acetivorans_C2A 1 1
Methanohalophilus_mahii_DSM_5219 1 1
Methanosphaerula_palustris_E1-9c 1 1
Methanoregula_boonei_6A8 1 1
Methanoculleus_bourgensis_MS2 1 1
Methanoculleus_marisnigri_JR1 1 1
Archaeoglobus_veneficus_SNP6 1 1
Archaeoglobus_fulgidus_DSM_4304 1 1
Thermococcus_sp._4557 1 1
Thermococcus_onnurineus_NA1 1 1
Thermococcus_kodakarensis_KOD1 1 1
Thermococcus_gammatolerans_EJ3 1 1
Thermococcus_sibiricus_MM_739 1 1
Thermococcus_barophilus_MP 1 1
Pyrococcus_sp._ST04 1 1
Pyrococcus_yayanosii_CH1 1 1
Pyrococcus_horikoshii_OT3 1 1
Pyrococcus_abyssi_GE5 1 1
Pyrococcus_furiosus_COM1 1 1
Thermoplasma_volcanium_GSS1 1 1
Thermoplasma_acidophilum_DSM_1728 1 1
Picrophilus_torridus_DSM_9790 1 1
Halopiger_xanaduensis_SH-6 1 1
Natrinema_sp._J7-2 1 1
Halorubrum_lacusprofundi_ATCC_49239 1 1
Halogeometricum_borinquense_DSM_11551 2 2
Haloferax_mediterranei_ATCC_33500 1 1
Haloferax_volcanii_DS2 1 1
Halorhabdus_utahensis_DSM_12940 1 1
Natronomonas_pharaonis_DSM_2160 1 1
Halobacterium_salinarum_R1 1 1
Halobacterium_sp._NRC-1 1 1
Methanocaldococcus_sp._FS406-22 1 1
Methanocaldococcus_fervens_AG86 1 1
Methanocaldococcus_vulcanius_M7 1 1
methanocaldococcus_infernus_ME 1 1
Methanocaldococcus_jannaschii_DSM_2661 2 2
Methanothermococcus_okinawensis_IH1 1 1
Methanococcus_aeolicus_Nankai-3 1 1
Methanococcus_maripaludis_C5 1 1
Methanococcus_voltae_A3 1 1
Methanococcus_vannielii_SB 1 1
Methanothermus_fervidus_DSM_2088 1 1
Methanothermobacter_marburgensis_str._Marburg 3 3
Methanothermobacter_thermautotrophicus_str._Delta_H 3 3
Methanosphaera_stadtmanae_DSM_3091 3 3
Methanobrevibacter_sp._AbM4 3 3
Methanobrevibacter_ruminantium_M1 3 3
Methanobrevibacter_smithii_ATCC_35061 3 3
Complete_genome_sequence_of_Methanobacterium_sp._Mb1 3 3
Acholeplasma_laidlawii_PG-8A 1 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number   Proteins
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   1 1
Paracoccidioides_brasiliensis_Pb01_ 1 1
Paracoccidioides_brasiliensis_Pb03_ 1 1
Ajellomyces_dermatitidis_ER-3_ 1 1
Histoplasma_capsulatum_H143 1 1
Histoplasma_capsulatum_H88 1 1
Histoplasma_capsulatum_G186AR 1 1
Aspergillus_fumigatus_A1163_ 1 1
Neospora_caninum_Nc-Liverpool_6.2 1 1
Chroococcidiopsis_thermalis_PCC_7203 1 1
Synechocystis_sp._PCC_6803_substr._PCC-P 1 1
Synechocystis_sp._PCC_6803_substr._PCC-N 1 1
Synechocystis_sp._PCC_6803_substr._GT-I 1 1
Synechocystis_sp._PCC_6803 1 1
Cyanobium_gracile_PCC_6307 1 1
Dactylococcopsis_salina_PCC_8305 1 1
Synechococcus_sp._JA-2-3B'a(2-13) 1 1
Synechococcus_sp._JA-3-3Ab 1 1
Synechococcus_sp._WH_7803 1 1
Synechococcus_sp._PCC_7002 1 1
Oscillatoria_nigro-viridis_PCC_7112 1 1
Cyanothece_sp._PCC_7822 1 1
Cyanothece_sp._PCC_7425 1 1
Cyanobacterium_aponinum_PCC_10605 2 2
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 4 2
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 1 1
Stanieria_cyanosphaera_PCC_7437 1 1
Calothrix_parietina_Calothrix_sp._PCC_6303 1 1
Cylindrospermum_stagnale_PCC_7417 1 1
Anabaena_cylindrica_PCC_7122 1 1
Gordonibacter_pamelaeae_7-10-1-b 1 1
Adlercreutzia_equolifaciens_DSM_19450 2 2
Frankia_sp._EuI1c 2 1
Nocardiopsis_alba_ATCC_BAA-2165 1 1
Streptomyces_davawensis_JCM_4913 1 1
Streptomyces_fulvissimus_DSM_40593 1 1
Streptomyces_venezuelae_ATCC_10712 1 1
Streptomyces_collinus_Tu_365 1 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1
Amycolatopsis_mediterranei_RB 3 2
Amycolatopsis_mediterranei_S699 3 2
Amycolatopsis_mediterranei_S699 3 2
Propionibacterium_acidipropionici_ATCC_4875 1 1
Nocardia_brasiliensis_ATCC_700358 1 1
Mycobacterium_abscessus_subsp._bolletii_50594 1 1
Mycobacterium_liflandii_128FXT 3 2
Mycobacterium_canettii_CIPT_140070017 2 1
Mycobacterium_canettii_CIPT_140070008 2 1
Mycobacterium_canettii_CIPT_140070010 2 1
Mycobacterium_tuberculosis_EAI5/NITR206 2 1
Mycobacterium_tuberculosis_EAI5 2 1
Mycobacterium_tuberculosis_RGTB423 2 1
Mycobacterium_tuberculosis_RGTB327 2 1
Mycobacterium_tuberculosis_CTRI-2 2 1
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 2 1
Mycobacterium_tuberculosis_KZN_605 2 1
Mycobacterium_tuberculosis_KZN_4207 2 1
Mycobacterium_tuberculosis_H37Ra 2 1
Mycobacterium_tuberculosis_str._Haarlem/NITR202 2 1
Mycobacterium_tuberculosis_str._Haarlem 2 1
Mycobacterium_tuberculosis_F11 2 1
Mycobacterium_tuberculosis_H37Rv 2 1
Mycobacterium_tuberculosis_CDC1551 2 1
Mycobacterium_bovis_AF2122/97 2 1
Mycobacterium_bovis_BCG_str._Korea_1168P 2 1
Mycobacterium_bovis_BCG_str._Mexico 2 1
Mycobacterium_bovis_BCG_str._Tokyo_172 2 1
Mycobacterium_leprae_TN 1 1
Mycobacterium_kansasii_ATCC_12478 3 2
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 1 1
Corynebacterium_terpenotabidum_Y-11 1 1
Corynebacterium_ulcerans_BR-AD22 1 1
Corynebacterium_ulcerans_809 1 1
Corynebacterium_argentoratense_DSM_44202 1 1
Corynebacterium_pseudotuberculosis_258 1 1
Corynebacterium_pseudotuberculosis_Cp162 1 1
Corynebacterium_pseudotuberculosis_P54B96 1 1
Corynebacterium_pseudotuberculosis_267 1 1
Corynebacterium_pseudotuberculosis_1/06-A 1 1
Corynebacterium_pseudotuberculosis_42/02-A 1 1
Corynebacterium_pseudotuberculosis_3/99-5 1 1
Corynebacterium_pseudotuberculosis_31 1 1
Corynebacterium_pseudotuberculosis_CIP_52.97 1 1
Corynebacterium_pseudotuberculosis_PAT10 1 1
Corynebacterium_pseudotuberculosis_I19 1 1
Corynebacterium_pseudotuberculosis_FRC41 1 1
Corynebacterium_pseudotuberculosis_C231 1 1
Corynebacterium_pseudotuberculosis_1002 1 1
Bifidobacterium_longum_NCC2705 1 1
Bifidobacterium_longum_DJO10A 1 1
Bifidobacterium_longum_subsp._infantis_157F 1 1
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 1 1
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 1 1
Bifidobacterium_longum_subsp._longum_KACC_91563 1 1
Bifidobacterium_longum_subsp._longum_BBMN68 1 1
Bifidobacterium_longum_subsp._longum_F8 1 1
Bifidobacterium_longum_subsp._longum_JCM_1217 1 1
Bifidobacterium_thermophilum_RBL67 1 1
Bifidobacterium_breve_UCC2003 1 1
Bifidobacterium_bifidum_PRL2010 1 1
Bifidobacterium_bifidum_BGN4 1 1
Actinomyces_graevenitzii_C83_ 1 1
Actinomyces_odontolyticus_ATCC_17982 1 1
Actinomyces_viscosus_C505 1 1
Dehalococcoides_mccartyi_GY50 1 1
Dehalococcoides_mccartyi_DCMB5 1 1
Dehalococcoides_mccartyi_BTF08 1 1
Dehalococcoides_sp._GT 1 1
Dehalococcoides_sp._VS 1 1
Dehalococcoides_sp._CBDB1 1 1
Chthonomonas_calidirosea_T49 5 3
Thermus_oshimai_JL-2 1 1
Thermus_thermophilus_JL-18 2 2
Thermus_thermophilus_SG0.5JP17-16 2 2
Thermus_thermophilus_HB8 2 2
Clostridium_thermocellum_DSM_1313 1 1
Sulfobacillus_acidophilus_TPY 4 3
Desulfosporosinus_meridiei_DSM_13257 2 2
Desulfitobacterium_dichloroeliminans_LMG_P-21439 1 1
Desulfitobacterium_hafniense_DCB-2 1 1
Desulfotomaculum_gibsoniae_DSM_7213 1 1
Clostridium_difficile_BI1 1 1
Clostridium_difficile_R20291 1 1
Clostridium_difficile_CD196 1 1
Roseburia_intestinalis_XB6B4 1 1
Clostridium_sp._SY8519 1 1
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 1 1
Clostridium_kluyveri_NBRC_12016 1 1
Clostridium_tetani_genome_12124569 1 1
Clostridium_perfringens_str._13 1 1
Clostridium_pasteurianum_BC1 1 1
Clostridium_botulinum_H04402_065 2 2
Clostridium_botulinum_BKT015925 1 1
Clostridium_botulinum_F_str._230613 2 2
Clostridium_botulinum_F_str._Langeland 2 2
Clostridium_botulinum_E3_str._Alaska_E43 1 1
Clostridium_botulinum_B1_str._Okra 2 2
Clostridium_botulinum_Ba4_str._657 2 2
Clostridium_botulinum_A2_str._Kyoto 2 2
Clostridium_botulinum_A3_str._Loch_Maree 2 2
Clostridium_botulinum_A_str._Hall 2 2
Clostridium_botulinum_A_str._ATCC_19397 2 2
Thermacetogenium_phaeum_DSM_12270 1 1
Melissococcus_plutonius_ATCC_35311 1 1
Enterococcus_mundtii_QU_25 2 2
Enterococcus_casseliflavus_EC20 1 1
Enterococcus_faecium_Aus0085 2 2
Enterococcus_faecium_NRRL_B-2354 2 2
Enterococcus_faecium_DO 2 2
Enterococcus_faecalis_str._Symbioflor_1 1 1
Enterococcus_faecalis_D32 1 1
Enterococcus_faecalis_OG1RF 1 1
Enterococcus_faecalis_V583 1 1
Leuconostoc_carnosum_JB16 1 1
Lactobacillus_paracasei_subsp._paracasei_8700:2 1 1
Lactobacillus_casei_LOCK919 1 1
Lactobacillus_casei_W56 1 1
Lactobacillus_casei_LC2W 1 1
Lactobacillus_casei_BD-II 1 1
Lactobacillus_casei_BL23 1 1
Lactobacillus_casei_str._Zhang 1 1
Lactobacillus_rhamnosus_LOCK908 1 1
Lactobacillus_rhamnosus_LOCK900 1 1
Lactobacillus_rhamnosus_ATCC_8530 1 1
Lactobacillus_rhamnosus_GG 1 1
Lactobacillus_rhamnosus_GG 1 1
Lactobacillus_johnsonii_N6.2 1 1
Lactobacillus_johnsonii_DPC_6026 1 1
Lactobacillus_johnsonii_NCC_533 1 1
Lactobacillus_salivarius_UCC118 2 2
Lactobacillus_fermentum_F-6 1 1
Lactobacillus_reuteri_TD1 1 1
Lactobacillus_reuteri_I5007 1 1
Lactobacillus_reuteri_JCM_1112 1 1
Lactobacillus_reuteri_SD2112 1 1
Lactobacillus_plantarum_16 2 2
Lactobacillus_plantarum_ZJ316 2 2
Lactobacillus_plantarum_subsp._plantarum_ST-III 2 2
Lactobacillus_plantarum_subsp._plantarum_P-8 2 2
Lactobacillus_plantarum_WCFS1 2 2
Lactobacillus_delbrueckii_subsp._bulgaricus_ND02 1 1
Lactobacillus_brevis_KB290 2 2
Pediococcus_pentosaceus_SL4 2 2
Lactococcus_garvieae_Lg2 1 1
Lactococcus_lactis_subsp._lactis_KLDS_4.0325 1 1
Lactococcus_lactis_subsp._lactis_IO-1 1 1
Lactococcus_lactis_subsp._lactis_CV56 1 1
Lactococcus_lactis_subsp._lactis_KF147 1 1
Lactococcus_lactis_subsp._lactis_Il1403 1 1
Lactococcus_lactis_subsp._cremoris_KW2 1 1
Lactococcus_lactis_subsp._cremoris_UC509.9 1 1
Lactococcus_lactis_subsp._cremoris_A76 1 1
Lactococcus_lactis_subsp._cremoris_NZ9000 1 1
Lactococcus_lactis_subsp._cremoris_SK11 1 1
Thermobacillus_composti_KWC4 1 1
Paenibacillus_sp._Y412MC10 2 2
Listeria_monocytogenes_EGD_sequence 2 2
Listeria_monocytogenes_N53-1 2 2
Listeria_monocytogenes_La111 2 2
Listeria_monocytogenes_serotype_4b_str._LL195 2 2
Listeria_monocytogenes_07PF0776 2 2
Listeria_monocytogenes_M7 2 2
Listeria_monocytogenes_J1-220 2 2
Listeria_monocytogenes_J1816 2 2
Listeria_monocytogenes_SLCC2376 2 2
Listeria_monocytogenes_SLCC5850 2 2
Listeria_monocytogenes_ATCC_19117 2 2
Listeria_monocytogenes_L312 2 2
Listeria_monocytogenes_SLCC2479 2 2
Listeria_monocytogenes_SLCC7179 2 2
Listeria_monocytogenes_SLCC2540 2 2
Listeria_monocytogenes_SLCC2378 2 2
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 2 2
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 2 2
Listeria_monocytogenes_serotype_7_str._SLCC2482 2 2
Listeria_monocytogenes_08-5578 2 2
Listeria_monocytogenes_08-5923 2 2
Listeria_monocytogenes_L99 2 2
Listeria_monocytogenes_HCC23 2 2
Listeria_monocytogenes_10403S 2 2
Listeria_monocytogenes_J0161 2 2
Listeria_monocytogenes_Finland_1998 2 2
Listeria_monocytogenes_FSL_R2-561 2 2
Listeria_monocytogenes_serotype_4b_str._F2365 2 2
Listeria_monocytogenes_EGD-e 2 2
Geobacillus_sp._C56-T3 1 1
Geobacillus_sp._Y412MC52 1 1
Geobacillus_sp._Y412MC61 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 1 1
Bacillus_amyloliquefaciens_LFB112 1 1
Bacillus_amyloliquefaciens_CC178 1 1
Bacillus_amyloliquefaciens_Y2 1 1
Bacillus_amyloliquefaciens_IT-45 1 1
Bacillus_amyloliquefaciens_XH7 1 1
Bacillus_amyloliquefaciens_LL3 1 1
Bacillus_amyloliquefaciens_TA208 1 1
Bacillus_amyloliquefaciens_DSM_7 1 1
Bacillus_licheniformis_9945A 1 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 1 1
Bacillus_infantis_NRRL_B-14911 1 1
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 2 2
Bacillus_toyonensis_BCT-7112 2 2
Bacillus_thuringiensis_HD-771 3 3
Bacillus_thuringiensis_HD-789 3 3
Bacillus_thuringiensis_MC28 2 2
Bacillus_thuringiensis_serovar_chinensis_CT-43 3 3
Bacillus_thuringiensis_YBT-1518 3 3
Bacillus_thuringiensis_Bt407 3 3
Bacillus_thuringiensis_serovar_konkukian_str._97-27 4 4
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 3 3
Bacillus_thuringiensis_BMB171 4 4
Bacillus_thuringiensis_serovar_finitimus_YBT-020 2 2
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 3 3
Bacillus_cereus_FRI-35 3 3
Bacillus_cereus_biovar_anthracis_str._CI 4 4
Bacillus_cereus_AH820 2 2
Bacillus_cereus_AH187 4 4
Bacillus_cereus_B4264 3 3
Bacillus_cereus_G9842 4 4
Bacillus_cereus_Q1 3 3
Bacillus_cereus_F837/76 2 2
Bacillus_cereus_NC7401 4 4
Bacillus_cereus_E33L 2 2
Bacillus_cereus_ATCC_14579 3 3
Bacillus_cereus_ATCC_10987 2 2
Bacillus_anthracis_str._H9401 3 3
Bacillus_anthracis_str._CDC_684 3 3
Bacillus_anthracis_str._'Ames_Ancestor' 2 2
Bacillus_anthracis_str._Sterne 1 1
Bacillus_anthracis_str._Ames 1 1
Bacillus_anthracis_str._A2012 1 1
Rhodothermus_marinus_SG0.5JP17-172 1 1
Echinicola_vietnamensis_DSM_17526 1 1
Bacteroides_xylanisolvens_XB1A 1 1
Bacteroides_fragilis_638R 1 1
Bacteroides_fragilis_NCTC_9343 1 1
Psychroflexus_torquis_ATCC_700755 1 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 1 1
Singulisphaera_acidiphila_DSM_18658 4 2
Brachyspira_pilosicoli_WesB 1 1
Brachyspira_pilosicoli_B2904 1 1
Brachyspira_pilosicoli_P43/6/78 1 1
Thermotoga_maritima_MSB8 1 1
Acidithiobacillus_ferrooxidans_ATCC_23270 6 5
Bdellovibrio_exovorus_JSS 1 1
Desulfobacula_toluolica_Tol2 1 1
Lawsonia_intracellularis_N343 1 1
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 2 2
Desulfovibrio_vulgaris_RCH1 1 1
Desulfovibrio_vulgaris_str._'Miyazaki_F' 1 1
Desulfovibrio_vulgaris_str._Hildenborough 1 1
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 1 1
Desulfovibrio_desulfuricans_ND132 1 1
Geobacter_sp._M18 3 3
Geobacter_sulfurreducens_PCA 2 2
Burkholderia_phenoliruptrix_BR3459a 1 1
Ralstonia_solanacearum_FQY_4 1 1
Ralstonia_solanacearum_GMI1000 1 1
Burkholderia_sp._CCGE1003 1 1
Burkholderia_sp._CCGE1001 1 1
Burkholderia_sp._KJ006 2 2
Burkholderia_thailandensis_MSMB121 1 1
Burkholderia_pseudomallei_MSHR305 1 1
Burkholderia_pseudomallei_NCTC_13179 1 1
Burkholderia_pseudomallei_BPC006 1 1
Burkholderia_pseudomallei_1026b 1 1
Burkholderia_pseudomallei_MSHR346 1 1
Burkholderia_pseudomallei_668 1 1
Burkholderia_pseudomallei_1710b 1 1
Burkholderia_pseudomallei_K96243 1 1
Burkholderia_mallei_NCTC_10229 1 1
Burkholderia_mallei_NCTC_10247 1 1
Burkholderia_mallei_ATCC_23344 1 1
Burkholderia_lata 1 1
Burkholderia_ambifaria_MC40-6 3 3
Burkholderia_cenocepacia_MC0-3 1 1
Burkholderia_cenocepacia_AU_1054 1 1
Burkholderia_cenocepacia_J2315 1 1
Burkholderia_multivorans_ATCC_17616 1 1
Burkholderia_cepacia_GG4 1 1
Caulobacter_crescentus_CB15 1 1
Phaeobacter_gallaeciensis_DSM_17395 1 1
Phaeobacter_gallaeciensis_DSM_26640 1 1
Leisingera_methylohalidivorans_DSM_14336 1 1
Octadecabacter_antarcticus_307 1 1
Octadecabacter_arcticus_238 2 2
Rhodobacter_sphaeroides_KD131 1 1
Rhodobacter_sphaeroides_ATCC_17025 1 1
Rhodobacter_sphaeroides_2.4.1 2 2
Magnetospirillum_gryphiswaldense_MSR-1_v2 1 1
Rhodospirillum_rubrum_ATCC_11170 1 1
Hyphomicrobium_nitrativorans_NL23 1 1
Hyphomicrobium_denitrificans_1NES1 1 1
Rhodopseudomonas_palustris_CGA009 1 1
Bradyrhizobium_oligotrophicum_S58 1 1
Bibersteinia_trehalosi_USDA-ARS-USMARC-192 1 1
Aggregatibacter_actinomycetemcomitans_ANH9381 1 1
Aggregatibacter_actinomycetemcomitans_D11S-1 1 1
Mannheimia_haemolytica_USMARC_2286 1 1
Mannheimia_haemolytica_M42548 1 1
Mannheimia_haemolytica_D174 1 1
Mannheimia_haemolytica_D171 1 1
Mannheimia_haemolytica_D153 1 1
Mannheimia_haemolytica_USDA-ARS-USMARC-183 1 1
Mannheimia_haemolytica_USDA-ARS-USMARC-185 1 1
Pasteurella_multocida_36950 1 1
Pasteurella_multocida_subsp._multocida_str._HN06 1 1
Pasteurella_multocida_subsp._multocida_str._Pm70 1 1
Haemophilus_parasuis_ZJ0906 1 1
Actinobacillus_suis_H91-0380 1 1
Actinobacillus_pleuropneumoniae_serovar_3_str._JL03 1 1
Actinobacillus_pleuropneumoniae_serovar_7_str._AP76 1 1
Aeromonas_hydrophila_ML09-119 1 1
Vibrio_parahaemolyticus_BB22OP 1 1
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 1 1
Vibrio_nigripulchritudo_VibrioScope 1 1
Vibrio_vulnificus_CMCP6 1 1
Vibrio_vulnificus_YJ016 1 1
Vibrio_cholerae_LMA3984-4 1 1
Vibrio_cholerae_M66-2 1 1
Vibrio_cholerae_O395 1 1
Vibrio_cholerae_IEC224 1 1
Vibrio_cholerae_O1_str._2010EL-1786 1 1
Vibrio_cholerae_MJ-1236 1 1
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 1 1
Glaciecola_psychrophila_170 1 1
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 1 1
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 1 1
Alteromonas_macleodii_str._'Ionian_Sea_U8' 1 1
Alteromonas_macleodii_str._'Ionian_Sea_U7' 1 1
Alteromonas_macleodii_str._'Ionian_Sea_U4' 1 1
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 1 1
Alteromonas_macleodii_str._'English_Channel_615' 1 1
Alteromonas_macleodii_AltDE1 1 1
Alteromonas_macleodii_str._'English_Channel_673' 1 1
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 1 1
Alteromonas_macleodii_str._'Black_Sea_11' 1 1
Alteromonas_macleodii_ATCC_27126 1 1
Thalassolituus_oleivorans_MIL-1 2 2
Stenotrophomonas_maltophilia_D457 1 1
Stenotrophomonas_maltophilia_JV3 1 1
Stenotrophomonas_maltophilia_R551-3 1 1
Thioflavicoccus_mobilis_8321 2 2
Legionella_pneumophila_str._Paris 1 1
Legionella_pneumophila_str._Lens 1 1
Legionella_pneumophila_subsp._pneumophila_LPE509 1 1
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 1 1
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 1 1
Legionella_pneumophila_subsp._pneumophila 1 1
Legionella_pneumophila_subsp._pneumophila 1 1
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 1 1
Legionella_pneumophila_2300/99_Alcoy 1 1
Rahnella_aquatilis_HX2 1 1
Serratia_sp._AS13 1 1
Serratia_plymuthica_S13 1 1
Serratia_plymuthica_4Rx13 1 1
Serratia_marcescens_FGI94 1 1
Serratia_marcescens_WW4 1 1
Serratia_liquefaciens_ATCC_27592 1 1
Dickeya_dadantii_Ech586 1 1
Dickeya_dadantii_3937 1 1
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 1 1
Pantoea_ananatis_LMG_5342 1 1
Pantoea_ananatis_PA13 1 1
Pantoea_ananatis_AJ13355 1 1
Erwinia_pyrifoliae_DSM_12163 1 1
Erwinia_amylovora_CFBP1430 1 1
Cronobacter_sakazakii_CMCC_45402 1 1
Cronobacter_sakazakii_SP291 1 1
Cronobacter_sakazakii_ATCC_BAA-894 1 1
Shigella_sonnei_53G 1 1
Shigella_flexneri_2002017 1 1
Shigella_flexneri_2a_str._2457T 1 1
Shigella_flexneri_2a_str._301 1 1
Shigella_dysenteriae_1617 1 1
Shigella_boydii_Sb227 1 1
Salmonella_bongori_N268-08 2 2
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 1 1
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 1 1
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 2 2
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 1 1
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 1 1
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 1 1
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 2 2
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 1 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 1 1
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 1 1
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 2 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 1 1
Salmonella_enterica_serovar_Bovismorbificans_genomics 1 1
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 1 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 1 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 1 1
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 1 1
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 1 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 1 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 1 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 1 1
Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 1 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 1 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 2 2
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 1 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 1 1
Klebsiella_oxytoca_KCTC_1686 1 1
Escherichia_coli_E24377A 1 1
Escherichia_coli_E._coli_PMV-1 1 1
Escherichia_coli_JJ1886 1 1
Escherichia_coli_LY180 1 1
Escherichia_coli_APEC_O78 1 1
Escherichia_coli_O7:K1_str._CE10 1 1
Escherichia_coli_O104:H4_str._2009EL-2050 1 1
Escherichia_coli_O104:H4_str._2009EL-2071 1 1
Escherichia_coli_O104:H4_str._2011C-3493 1 1
Escherichia_coli_NA114 1 1
Escherichia_coli_P12b 1 1
Escherichia_coli_str._'clone_D_i2' 1 1
Escherichia_coli_str._'clone_D_i14' 1 1
Escherichia_coli_UM146 1 1
Escherichia_coli_042 1 1
Escherichia_coli_Xuzhou21 1 1
Escherichia_coli_IHE3034 1 1
Escherichia_coli_UMNK88 2 2
Escherichia_coli_O83:H1_str._NRG_857C 1 1
Escherichia_coli_ABU_83972 1 1
Escherichia_coli_KO11FL 1 1
Escherichia_coli_KO11FL 1 1
Escherichia_coli_LF82 1 1
Escherichia_coli_ED1a 1 1
Escherichia_coli_IAI39 1 1
Escherichia_coli_UMN026 1 1
Escherichia_coli_55989 1 1
Escherichia_coli_S88 1 1
Escherichia_coli_IAI1 1 1
Escherichia_coli_W 1 1
Escherichia_coli_W 1 1
Escherichia_coli_DH1 1 1
Escherichia_coli_DH1 1 1
Escherichia_coli_ATCC_8739 1 1
Escherichia_coli_BL21(DE3) 1 1
Escherichia_coli_BL21(DE3) 1 1
Escherichia_coli_SMS-3-5 1 1
Escherichia_coli_SE15 1 1
Escherichia_coli_SE11 1 1
Escherichia_coli_APEC_O1 1 1
Escherichia_coli_O103:H2_str._12009 1 1
Escherichia_coli_UTI89 1 1
Escherichia_coli_536 1 1
Escherichia_coli_HS 1 1
Escherichia_coli_ETEC_H10407 1 1
Escherichia_coli_O55:H7_str._RM12579 1 1
Escherichia_coli_O55:H7_str._CB9615 1 1
Escherichia_coli_O26:H11_str._11368 1 1
Escherichia_coli_CFT073 1 1
Escherichia_coli_O111:H-_str._11128 1 1
Escherichia_coli_O127:H6_str._E2348/69 1 1
Escherichia_coli_O157:H7_str._TW14359 1 1
Escherichia_coli_O157:H7_str._EC4115 1 1
Escherichia_coli_O157:H7_str._Sakai 1 1
Escherichia_coli_O157:H7_str._EDL933 1 1
Escherichia_coli_str._K-12_substr._MDS42 1 1
Escherichia_coli_BW2952 1 1
Escherichia_coli_str._K-12_substr._MG1655 1 1
Escherichia_coli_str._K-12_substr._W3110 1 1
Escherichia_coli_str._K-12_substr._DH10B 1 1
Escherichia_coli_B_str._REL606 1 1
Enterobacter_cloacae_SCF1 1 1
Enterobacter_cloacae_EcWSU1 1 1
Enterobacter_cloacae_subsp._cloacae_ENHKU01 1 1
Enterobacter_cloacae_subsp._cloacae_NCTC_9394 1 1
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 1 1
Pseudomonas_denitrificans_ATCC_13867 1 1
Pseudomonas_stutzeri_RCH2 1 1
Pseudomonas_monteilii_SB3101 1 1
Pseudomonas_monteilii_SB3078 1 1
Pseudomonas_putida_H8234 1 1
Pseudomonas_putida_HB3267 1 1
Pseudomonas_putida_NBRC_14164 1 1
Pseudomonas_putida_DOT-T1E 1 1
Pseudomonas_putida_S16 1 1
Pseudomonas_putida_BIRD-1 1 1
Pseudomonas_putida_W619 1 1
Pseudomonas_putida_ND6 1 1
Pseudomonas_putida_KT2440 1 1
Pseudomonas_putida_GB-1 1 1
Pseudomonas_protegens_CHA0 1 1
Pseudomonas_fluorescens_R124 1 1
Pseudomonas_fluorescens_Pf0-1 1 1
Acinetobacter_genomosp._13TU__RUH2624 2 2
Acinetobacter_sp.__SH024 2 2
Acinetobacter_calcoaceticus_ruh2202 2 2
Acinetobacter_baumannii_ZW85-1 2 2
Acinetobacter_baumannii_TYTH-1 2 2
Acinetobacter_baumannii_BJAB0868 2 2
Acinetobacter_baumannii_BJAB0715 2 2
Acinetobacter_baumannii_BJAB07104 2 2
Acinetobacter_baumannii_TCDC-AB0715 2 2
Acinetobacter_baumannii_D1279779 2 2
Acinetobacter_baumannii_MDR-TJ 2 2
Acinetobacter_baumannii_1656-2 2 2
Acinetobacter_baumannii__ATCC_19606 2 2
Acinetobacter_baumannii_AB307-0294 2 2
Acinetobacter_baumannii_AYE 2 2
Acinetobacter_baumannii_SDF 2 2
Acinetobacter_baumannii_MDR-ZJ06 2 2
Acinetobacter_baumannii_AB0057 2 2
Acinetobacter_baumannii_ACICU 2 2
Acinetobacter_radioresistens__SH164 2 2
Acinetobacter_junii__SH205 2 2
Acinetobacter_johnsonii__SH046 3 3
Acinetobacter_lwoffii__SH145 2 2
Francisella_noatunensis_subsp._orientalis_LADL--07-285A 1 1
Francisella_tularensis_subsp._mediasiatica_FSC147 1 1
Francisella_tularensis_subsp._holarctica_F92 1 1
Francisella_tularensis_subsp._holarctica_FTNF002-00 1 1
Francisella_tularensis_subsp._holarctica_OSU18 1 1
Francisella_tularensis_subsp._holarctica_LVS 1 1
Francisella_tularensis_subsp._holarctica_FSC200 1 1
Francisella_tularensis_subsp._tularensis_TIGB03 1 1
Francisella_tularensis_subsp._tularensis_TI0902 1 1
Francisella_tularensis_subsp._tularensis_NE061598 1 1
Francisella_tularensis_subsp._tularensis_FSC198 1 1
Francisella_tularensis_subsp._tularensis_SCHU_S4 1 1
Francisella_cf._novicida_Fx1 1 1
Caldisphaera_lagunensis_DSM_15908 1 1
Sulfolobus_islandicus_Y.G.57.14 1 1
Sulfolobus_islandicus_L.S.2.15 1 1
Methanomethylovorans_hollandica_DSM_15978 1 1
Methanolobus_psychrophilus_R15 1 1
Thermococcus_sp._AM4 1 1
Thermococcus_sp._CL1 1 1
Thermococcus_litoralis_DSM_5473 1 1
Pyrococcus_sp._NA2 1 1
Pyrococcus_furiosus_DSM_3638 1 1
Candidatus_Methanomethylophilus_alvus_Mx1201 1 1
Candidatus_Methanomassiliicoccus_intestinalis_Issoire-Mx1 1 1
Ferroplasma_acidarmanus_fer1 1 1
Halovivax_ruber_XH-70 1 1
Natrinema_pellirubrum_DSM_15624 1 1
Halorhabdus_tiamatea_SARL4B 1 1
Methanococcus_maripaludis_X1 1 1
Methanococcus_maripaludis_C6 2 2
Methanococcus_maripaludis_C7 1 1
Methanococcus_maripaludis_S2 1 1
Methanobacterium_sp._SWAN-1 5 5

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Longest transcript per gene
Genome     Number   Proteins
Sus_scrofa_69_10.2   (Pig)   1 1
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   1 1
Takifugu_rubripes_69_4   (Torafugu)   1 1
Oryzias_latipes_69_1   (Japanese medaka)   1 1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   1 1
Oreochromis_niloticus_69_1.0   (Nile tilapia)   1 1

Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   1 1
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   1 1
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   1 1
Acholeplasma_laidlawii_PG-8A_(duplicate) 1 1
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 2 1
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 1 1
NCBI_plasmid_sequences_(Plasmids) 29 29
STRING_v9.0.5_(STRING) 564 549
Uniprot_2018_03_genome 12243 11866
NCBI_2017_08_genome 64276 61015
Protein_Data_Bank_(all_PDB_sequenc) 20 20
PDB_chains_(SCOP_1.75)_(PDB) 2 2
Protozoadb_2010_08_(Protozoadb) 2 2
TargetDB__(Targets) 44 44
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 59 59
NCBI_viral_sequences_(Viral) 2 2

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