SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for AF0104/ALDC/Ptd012-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a AF0104/ALDC/Ptd012-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   14 14
Pan_troglodytes_76_2.1.4   (Chimpanzee)   1 1
Gorilla_gorilla_76_3.1   (Western gorilla)   1 1
Pongo_abelii_76_2   (Sumatran orangutan)   1 1
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   1 1
Papio_anubis_76   (Olive baboon)   1 1
Macaca_mulatta_76_1   (Rhesus monkey)   3 3
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   4 4
Otolemur_garnettii_76_3   (Small-eared galago)   1 1
Rattus_norvegicus_76_5.0   (Norway rat)   1 1
Mus_musculus_76_38   (House mouse)   3 3
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1 1
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   1 1
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1 1
Cavia_porcellus_76_3   (Domestic guinea pig)   1 1
Oryctolagus_cuniculus_76_2   (Rabbit)   1 1
Ochotona_princeps_76   (American pika)   1 1
Tupaia_belangeri_76   (Northern tree shrew)   1 1
Sus_scrofa_76_10.2   (Pig)   1 1
Bos_taurus_76_3.1   (Cattle)   1 1
Ovis_aries_76_3.1   (Sheep)   1 1
Vicugna_pacos_76_1   (Alpaca)   1 1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1 1
Mustela_putorius_furo_76_1.0   (Domestic ferret)   1 1
Ailuropoda_melanoleuca_76_1   (Giant panda)   1 1
Canis_familiaris_76_3.1   (Dog)   2 2
Felis_catus_76_6.2   (Domestic cat)   1 1
Equus_caballus_76_2   (Horse)   1 1
Myotis_lucifugus_76_2.0   (Little brown bat)   1 1
Pteropus_vampyrus_76_1   (Large flying fox)   1 1
Sorex_araneus_76_1   (European shrew)   1 1
Erinaceus_europaeus_76   (Western European hedgehog)   1 1
Procavia_capensis_76_1   (Cape rock hyrax)   2 1
Loxodonta_africana_76_3   (African savanna elephant)   1 1
Echinops_telfairi_76   (Small Madagascar hedgehog)   2 1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   1 1
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   1 1
Macropus_eugenii_76_1.0   (Tammar wallaby)   1 1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1 1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1 1
Ornithorhynchus_anatinus_76_5   (Platypus)   1 1
Saccoglossus_kowalevskii_v3.0 2 2
Meleagris_gallopavo_76_2   (Turkey)   1 1
Gallus_gallus_76_4   (Chicken)   1 1
Anas_platyrhynchos_76_1.0   (Mallard)   1 1
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   1 1
Ficedula_albicollis_76_1.0   (Collared flycatcher)   1 1
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   2 2
Anolis_carolinensis_76_2.0   (Green anole)   2 2
Xenopus_laevis_   (African clawed frog)   3 3
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   1 1
Latimeria_chalumnae_76_1   (Coelacanth)   3 3
Lepisosteus_oculatus_76   (Spotted gar)   2 2
Gadus_morhua_76_1   (Atlantic cod)   2 2
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   1 1
Takifugu_rubripes_76_4   (Torafugu)   1 1
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   2 2
Oryzias_latipes_76_1   (Japanese medaka)   2 2
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   2 2
Poecilia_formosa_76   (Amazon molly)   2 2
Oreochromis_niloticus_76_1.0   (Nile tilapia)   1 1
Astyanax_mexicanus_76   (Mexican tetra)   2 2
Danio_rerio_76_9   (Zebrafish)   1 1
Oikopleura_dioica 1 1
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   1 1
Ciona_intestinalis_76   (Vase tunicate)   1 1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   3 2
Adineta_vaga 4 4
Octopus_bimaculoides_280 3 3
Crassostrea_gigas_22   (Pacific oyster)   2 2
Lottia_gigantea_   (Owl limpet)   2 2
Capitella_sp._I_ 5 5
Danaus_plexippus_OGS1.0   (Monarch butterfly)   1 1
Heliconius_melpomene_   (Postman butterfly)   2 2
Bombyx_mori_   (Domestic silkworm)   1 1
Nasonia_vitripennis_   (Jewel wasp)   1 1
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   2 2
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   1 1
Linepithema_humile_v1.1   (Argentine ant)   8 6
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   6 6
Solenopsis_invicta_v.2.2.3   (Red fire ant)   1 1
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   7 6
Atta_cephalotes_v1.1 2 2
Camponotus_floridanus_v3.3   (Florida carpenter ant)   4 4
Lucilia_cuprina   (Australian sheep blowfly)   1 1
Drosophila_grimshawi_1.3 1 1
Drosophila_willistoni_1.3 2 2
Drosophila_pseudoobscura_2.13 1 1
Drosophila_persimilis_1.3 1 1
Drosophila_suzukii 2 1
Drosophila_yakuba_1.3 2 2
Drosophila_simulans_1.3 2 2
Drosophila_sechellia_1.3 2 2
Drosophila_melanogaster_76_5   (Fruit fly)   2 2
Drosophila_erecta_1.3 3 3
Drosophila_ananassae_1.3 3 2
Drosophila_virilis_1.2 1 1
Drosophila_mojavensis_1.3 1 1
Megaselia_scalaris_22 2 2
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   2 2
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   1 1
Anopheles_darlingi_22   (American malaria mosquito)   1 1
Anopheles_gambiae_49_3j   (African malaria mosquito)   1 1
Tribolium_castaneum_3.0   (Red flour beetle)   1 1
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   1 1
Acyrthosiphon_pisum_   (Pea aphid)   1 1
Rhodnius_prolixus_22 2 2
Daphnia_pulex_   (Common water flea)   1 1
Strigamia_maritima_22 3 2
Sarcoptes_scabiei 1 1
Tetranychus_urticae_   (Two-spotted spider mite)   4 4
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   1 1
Pristionchus_pacificus_ 1 1
Caenorhabditis_japonica_ 1 1
Caenorhabditis_brenneri_ 1 1
Caenorhabditis_remanei_ 2 2
Caenorhabditis_elegans_76_235   (Roundworm)   1 1
Caenorhabditis_briggsae_2 1 1
Hymenolepis_microstoma_ 2 2
Echinococcus_multilocularis_ 2 2
Echinococcus_granulosus_ 2 2
Taenia_solium_   (Pork tapeworm)   2 2
Schistosoma_mansoni_ 4 4
Mnemiopsis_leidyi   (Sea walnut)   1 1
Acropora_digitifera_v1.0 2 2
Nematostella_vectensis_1.0   (Starlet sea anemone)   3 2
Hydra_vulgaris 3 3
Amphimedon_queenslandica 1 1
Proterospongia_sp._ATCC_50818_ 2 2
Monosiga_brevicollis_ 2 2
Capsaspora_owczarzaki_ATCC_30864_ 1 1
Apiospora_montagnei_NRRL_25634_v1.0 2 2
Magnaporthe_poae_ATCC_64411_22 1 1
Magnaporthe_grisea_70-15_ 1 1
Podospora_anserina_ 1 1
Sporotrichum_thermophile_ATCC_42464_ 1 1
Thielavia_terrestris_NRRL_8126_ 1 1
Chaetomium_globosum_CBS_148.51_ 1 1
Neurospora_tetrasperma_ 1 1
Neurospora_discreta_FGSC_8579_ 1 1
Neurospora_crassa_OR74A_ 1 1
Cryphonectria_parasitica_   (Chestnut blight fungus)   1 1
Glomerella_graminicola_22 2 2
Fusarium_graminearum_ 1 1
Nectria_haematococca_mpVI_ 2 2
Fusarium_oxysporum_f._sp._lycopersici_4286_ 2 2
Fusarium_verticillioides_7600_ 2 2
Trichoderma_asperellum_CBS_433.97_v1.0 2 2
Trichoderma_atroviride_ 2 2
Trichoderma_citrinoviride_v1.0 1 1
Trichoderma_reesei_1.2 1 1
Trichoderma_virens_Gv29-8_ 1 1
Trichoderma_longibrachiatum_ATCC_18648_v1.0 1 1
Trichoderma_harzianum_CBS_226.95_v1.0 2 2
Amorphotheca_resinae_v1.0   (Creosote fungus)   1 1
Didymella_exigua_CBS_183.55_v1.0 2 2
Leptosphaeria_maculans_22 1 1
Setosphaeria_turcica_v1.0 1 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 1 1
Cochliobolus_victoriae_FI3_v1.0 1 1
Cochliobolus_carbonum_26-R-13_v1.0 1 1
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   1 1
Alternaria_brassicicola_ 1 1
Cochliobolus_lunatus_m118_v2.0 1 1
Pyrenophora_teres_f._teres_22 1 1
Pyrenophora_tritici-repentis_ 1 1
Stagonospora_nodorum_ 2 2
Mycosphaerella_graminicola_IPO323_ 2 2
Zasmidium_cellare_ATCC_36951_v1.0 3 3
Dothistroma_septosporum 3 3
Septoria_musiva_v1.0 2 2
Mycosphaerella_fijiensis_CIRAD86_ 2 2
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 1 1
Aspergillus_zonatus_v1.0 4 4
Penicillium_chrysogenum_Wisconsin_54-1255_ 1 1
Penicillium_chrysogenum_v1.0 1 1
Aspergillus_acidus_v1.0 1 1
Aspergillus_brasiliensis_v1.0 1 1
Aspergillus_nidulans_FGSC_A4_ 1 1
Aspergillus_sydowii_v1.0 1 1
Aspergillus_versicolor_v1.0 2 2
Aspergillus_carbonarius_ITEM_5010_ 2 2
Aspergillus_terreus_NIH2624_ 3 3
Aspergillus_tubingensis_v1.0 1 1
Aspergillus_wentii_v1.0 3 3
Aspergillus_oryzae_RIB40_ 2 2
Aspergillus_niger_22 1 1
Aspergillus_niger_ATCC_1015_ 1 1
Aspergillus_flavus_NRRL3357_ 2 2
Aspergillus_clavatus_NRRL_1_ 2 2
Penicillium_marneffei_ATCC_18224_ 2 2
Selaginella_moellendorffii_ 12 12
Pinus_taeda   (Loblolly pine)   22 20
Picea_abies   (Norway spruce)   16 16
Eucalyptus_grandis_v201   (Rose gum)   34 34
Theobroma_cacao_B97-61/B2_v1   (Cacao)   21 21
Gossypium_raimondii_v221 123 123
Citrus_clementina_v165 29 29
Citrus_sinensis_v154   (Sweet orange)   36 36
Thellungiella_halophila_v173 33 33
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   59 59
Capsella_rubella_v183 34 34
Arabidopsis_lyrata_   (Lyrate rockcress)   32 31
Arabidopsis_thaliana_10   (Thale cress)   37 37
Carica_papaya_   (Papaya)   23 22
Medicago_truncatula_   (Barrel medic)   69 68
Phaseolus_vulgaris_v186   (French bean)   41 41
Glycine_max_v109   (Soybean)   88 86
Cucumis_sativus_v122   (Cucumber)   36 36
Fragaria_vesca_   (Wild strawberry)   22 22
Malus_domestica_v196   (Apple)   55 54
Prunus_persica_v139   (Peach)   21 21
Linum_usitatissimum_v200   (Flax)   36 36
Manihot_esculenta_v147   (Cassava)   44 44
Populus_trichocarpa_v156   (Black cottonwood)   43 43
Vitis_vinifera_   (Wine grape)   17 17
Mimulus_guttatus_v140   (Spotted monkey flower)   39 39
Solanum_lycopersicum_v.2.3   (Tomato)   33 33
Solanum_tuberosum_   (Potato)   45 44
Actinidia_chinensis_Hongyang_ 55 53
Aquilegia_coerulea_v195 31 31
Triticum_urartu_22 12 12
Triticum_aestivum_22   (Bread wheat)   48 48
Aegilops_tauschii_22 14 13
Brachypodium_distachyon_   (Stiff brome)   30 30
Oryza_barthii_22   (African wild rice)   19 19
Oryza_meridionalis_22 27 27
Oryza_glumaepatula_22 27 27
Oryza_glaberrima   (African rice)   22 22
Oryza_punctata_22 27 27
Oryza_nivara_22 31 31
Oryza_brachyantha_22   (Malo sina)   19 19
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   35 35
Oryza_sativa_v193   (Rice)   35 35
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   23 22
Panicum_virgatum_v202   (Switchgrass)   50 50
Setaria_italica_v164   (Foxtail millet)   26 26
Zea_mays_subsp._mays_   (Maize)   57 57
Zea_mays_v181   (Maize)   61 61
Sorghum_bicolor_   (Sorghum)   26 24
Musa_balbisiana   (Balbis banana)   65 65
Musa_acuminata_22   (Wild Malaysian banana)   59 59
Amborella_trichopoda_22 14 14
Physcomitrella_patens 13 13
Asterochloris_sp._Cgr/DA1pho_v1.0 1 1
Chlorella_variabilis_sp._NC64A_ 1 1
Ostreococcus_sp._RCC809_ 1 1
Ostreococcus_lucimarinus_CCE9901_ 1 1
Ostreococcus_tauri_ 1 1
Bathycoccus_prasinos_ 1 1
Micromonas_pusilla_CCMP1545_v3.0 1 1
Porphyridium_purpureum_02_2012 1 1
Bigelowiella_natans_CCMP2755_22 2 2
Ectocarpus_siliculosus 2 1
Aureococcus_anophagefferens_ 1 1
Fragilariopsis_cylindrus 1 1
Perkinsus_marinus_ATCC_50983_ 4 2
Paramecium_tetraurelia_ 1 1
Tetrahymena_thermophila_SB210_1_ 2 2
Naegleria_gruberi_ 1 1
Trichomonas_vaginalis_ 2 2
Guillardia_theta_CCMP2712_v1.0_ 1 1
Emiliania_huxleyi_CCMP1516_ 2 2
Thermobaculum_terrenum_ATCC_BAA-798 1 1
Acaryochloris_marina_MBIC11017 2 2
Synechococcus_sp._PCC_6312 1 1
Synechococcus_sp._CC9311 2 2
Synechococcus_elongatus_PCC_7942 1 1
Prochlorococcus_marinus_str._MIT_9515 1 1
Microcoleus_sp._PCC_7113 1 1
Geitlerinema_sp._PCC_7407 1 1
Gloeocapsa_sp._PCC_7428 1 1
Gloeobacter_violaceus_PCC_7421 2 2
Rivularia_sp._PCC_7116 1 1
Calothrix_sp._PCC_7507 1 1
Nostoc_punctiforme_PCC_73102 1 1
Mycoplasma_penetrans_HF-2 1 1
Mycoplasma_mobile_163K 1 1
Conexibacter_woesei_DSM_14684 1 1
Slackia_heliotrinireducens_DSM_20476 1 1
Rubrobacter_xylanophilus_DSM_9941 1 1
Blastococcus_saxobsidens_DD2 1 1
Kitasatospora_setae_KM-6054 1 1
Streptomyces_coelicolor_A3(2) 1 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 1 1
Propionibacterium_propionicum_F0230a 1 1
Propionibacterium_freudenreichii_subsp._shermanii_CIRM-BIA1 1 1
Salinispora_arenicola_CNS-205 1 1
Micromonospora_aurantiaca_ATCC_27029 1 1
Mycobacterium_ulcerans_Agy99 1 1
Mycobacterium_marinum_M 1 1
Corynebacterium_resistens_DSM_45100 1 1
Corynebacterium_aurimucosum_ATCC_700975 1 1
Corynebacterium_kroppenstedtii_DSM_44385 1 1
Corynebacterium_ulcerans_0102 1 1
Corynebacterium_jeikeium_K411 1 1
Corynebacterium_variabile_DSM_44702 1 1
Corynebacterium_pseudotuberculosis_316 1 1
Corynebacterium_diphtheriae_NCTC_13129 1 1
Microbacterium_testaceum_StLB037 1 1
Rothia_mucilaginosa_DY-18 1 1
Rothia_dentocariosa_ATCC_17931 1 1
Bifidobacterium_longum_subsp._longum_JDM301 1 1
Bifidobacterium_breve_ACS-071-V-Sch8b 1 1
Bifidobacterium_bifidum_S17 1 1
Dehalococcoides_ethenogenes_195 1 1
Dehalococcoides_sp._BAV1 1 1
Sphaerobacter_thermophilus_DSM_20745 1 1
Roseiflexus_castenholzii_DSM_13941 1 1
Chloroflexus_sp._MS-G 1 1
Deinococcus_gobiensis_I-0 1 1
Finegoldia_magna_ATCC_29328 1 1
Megasphaera_elsdenii_DSM_20460 2 2
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 4 4
Erysipelothrix_rhusiopathiae_str._Fujisawa 1 1
Natranaerobius_thermophilus_JW/NM-WN-LF 1 1
Faecalibacterium_prausnitzii 1 1
Ruminococcus_sp. 1 1
Thermaerobacter_marianensis_DSM_12885 1 1
butyrate-producing_bacterium_SS3/4 1 1
Candidatus_Desulforudis_audaxviator_MP104C 1 1
Pelotomaculum_thermopropionicum_SI 3 3
Desulfotomaculum_acetoxidans_DSM_771 1 1
Desulfotomaculum_kuznetsovii_DSM_6115 1 1
Desulfotomaculum_carboxydivorans_CO-1-SRB 1 1
Acetobacterium_woodii_DSM_1030 1 1
Eubacterium_limosum_KIST612 1 1
Clostridium_phytofermentans_ISDg 1 1
Eubacterium_rectale_M104/1 1 1
Eubacterium_rectale_ATCC_33656 1 1
Coprococcus_sp._ART55/1 1 1
Clostridium_novyi_NT 1 1
Clostridium_ljungdahlii_DSM_13528 1 1
Clostridium_tetani_E88 1 1
Clostridium_cellulovorans_743B 1 1
Clostridium_acetobutylicum_ATCC_824 1 1
Mahella_australiensis_50-1_BON 1 1
Caldicellulosiruptor_obsidiansis_OB47 1 1
Caldicellulosiruptor_hydrothermalis_108 1 1
Caldicellulosiruptor_kristjanssonii_177R1B 1 1
Caldicellulosiruptor_bescii_DSM_6725 1 1
Thermoanaerobacterium_xylanolyticum_LX-11 1 1
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 1 1
Coprothermobacter_proteolyticus_DSM_5265 1 1
Thermoanaerobacter_tengcongensis_MB4 1 1
Moorella_thermoacetica_ATCC_39073 1 1
Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 1 1
Thermoanaerobacter_pseudethanolicus_ATCC_33223 1 1
Thermoanaerobacter_sp._X514 1 1
Thermoanaerobacter_italicus_Ab9 1 1
Thermoanaerobacter_wiegelii_Rt8.B1 1 1
Thermoanaerobacter_brockii_subsp._finnii_Ako-1 1 1
Acetohalobium_arabaticum_DSM_5501 2 2
Halothermothrix_orenii_H_168 1 1
Halanaerobium_hydrogeniformans 1 1
Tetragenococcus_halophilus_NBRC_12172 1 1
Enterococcus_sp._7L76 1 1
Enterococcus_hirae_ATCC_9790 1 1
Enterococcus_faecium_Aus0004 1 1
Enterococcus_faecalis_62 1 1
Oenococcus_oeni_PSU-1 1 1
Leuconostoc_sp._C2 1 1
Leuconostoc_kimchii_IMSNU_11154 1 1
Leuconostoc_citreum_KM20 1 1
Leuconostoc_mesenteroides_subsp._mesenteroides_ATCC_8293 2 2
Leuconostoc_gasicomitatum_LMG_18811 1 1
Lactobacillus_casei_ATCC_334 1 1
Lactobacillus_rhamnosus_Lc_705 1 1
Lactobacillus_johnsonii_FI9785 1 1
Lactobacillus_salivarius_CECT_5713 1 1
Lactobacillus_fermentum_IFO_3956 1 1
Lactobacillus_sakei_subsp._sakei_23K 2 2
Lactobacillus_reuteri_DSM_20016 1 1
Lactobacillus_plantarum_JDM1 1 1
Lactobacillus_buchneri_NRRL_B-30929 2 2
Lactobacillus_buchneri 2 2
Lactobacillus_brevis_ATCC_367 1 1
Pediococcus_claussenii_ATCC_BAA-344 1 1
Pediococcus_pentosaceus_ATCC_25745 1 1
Lactococcus_garvieae_ATCC_49156 2 2
Lactococcus_lactis_subsp._cremoris_MG1363 2 2
Streptococcus_sp._I-P16 1 1
Streptococcus_sp._I-G2 1 1
Streptococcus_intermedius_JTH08 1 1
Streptococcus_gallolyticus_UCN34 1 1
Streptococcus_pseudopneumoniae_IS7493 1 1
Streptococcus_pasteurianus_ATCC_43144 1 1
Streptococcus_infantarius_subsp._infantarius_CJ18 1 1
Streptococcus_macedonicus_ACA-DC_198 1 1
Streptococcus_mitis_B6 1 1
Streptococcus_uberis_0140J 1 1
Streptococcus_parauberis_KCTC_11537 1 1
Streptococcus_parasanguinis_ATCC_15912 1 1
Streptococcus_pneumoniae_P1031 1 1
Streptococcus_agalactiae_A909 1 1
Streptococcus_mutans_NN2025 1 1
Streptococcus_thermophilus_LMD-9 1 1
Streptococcus_suis_P1/7 1 1
Streptococcus_sanguinis_SK36 1 1
Streptococcus_salivarius_57.I 1 1
Streptococcus_oralis_Uo5 1 1
Streptococcus_gordonii_str._Challis_substr._CH1 1 1
Exiguobacterium_sp._MH3 1 1
Exiguobacterium_sibiricum_255-15 1 1
Brevibacillus_brevis_NBRC_100599 1 1
Paenibacillus_terrae_HPL-003 1 1
Paenibacillus_polymyxa_M1 1 1
Listeria_welshimeri_serovar_6b_str._SLCC5334 1 1
Listeria_innocua_Clip11262 1 1
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 1 1
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 1 1
Listeria_ivanovii_subsp._ivanovii_PAM_55 1 1
Lysinibacillus_sphaericus_C3-41 1 1
Bacillus_sp._JS 1 1
Bacillus_amyloliquefaciens_FZB42 1 1
Bacillus_atrophaeus_1942 1 1
Bacillus_subtilis_subsp._subtilis_str._168 1 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 1 1
Bacillus_weihenstephanensis_KBAB4 1 1
Bacillus_thuringiensis_str._Al_Hakam 1 1
Bacillus_cereus_03BB102 1 1
Bacillus_anthracis_str._A0248 1 1
Bacillus_clausii_KSM-K16 1 1
Bacillus_pumilus_SAFR-032 1 1
Bacillus_megaterium_DSM_319 1 1
Bacillus_coagulans_2-6 1 1
Macrococcus_caseolyticus_JCSC5402 1 1
Staphylococcus_pseudintermedius_HKU10-03 2 2
Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305 2 2
Staphylococcus_lugdunensis_HKU09-01 1 1
Staphylococcus_haemolyticus_JCSC1435 2 2
Staphylococcus_epidermidis_RP62A 1 1
Staphylococcus_carnosus_subsp._carnosus_TM300 1 1
Staphylococcus_aureus_subsp._aureus_JH1 3 3
Staphylococcus_aureus 2 2
Pelodictyon_phaeoclathratiforme_BU-1 1 1
Chlorobium_luteolum_DSM_273 3 3
Chlorobium_chlorochromatii_CaD3 1 1
Chlorobium_phaeobacteroides_DSM_266 1 1
Chlorobium_phaeovibrioides_DSM_265 1 1
Chlorobium_limicola_DSM_245 1 1
Chlorobaculum_parvum_NCIB_8327 1 1
Chlorobium_tepidum_TLS 1 1
Prosthecochloris_aestuarii_DSM_271 2 2
Niastella_koreensis_GR20-10 1 1
Chitinophaga_pinensis_DSM_2588 1 1
Fibrella_aestuarina 2 2
Dyadobacter_fermentans_DSM_18053 1 1
Cytophaga_hutchinsonii_ATCC_33406 1 1
Spirosoma_linguale_DSM_74 1 1
Bacteroides_salanitronis_DSM_18170 1 1
Bacteroides_thetaiotaomicron_VPI-5482 1 1
Sphingobacterium_sp._21 1 1
Fluviicola_taffensis_DSM_16823 1 1
Zobellia_galactanivorans 2 2
Cellulophaga_algicola_DSM_14237 1 1
Polaribacter_sp._MED152 1 1
Parachlamydia_acanthamoebae_UV-7 1 1
Simkania_negevensis_Z 2 2
Isosphaera_pallida_ATCC_43644 1 1
Fretibacterium_fastidiosum 1 1
Thermovirga_lienii_DSM_17291 2 2
Aminobacterium_colombiense_DSM_12261 2 2
Anaerobaculum_mobile_DSM_13181 1 1
Sphaerochaeta_pleomorpha_str._Grapes 2 2
Sphaerochaeta_globus_str._Buddy 1 1
Spirochaeta_caldaria_DSM_7334 1 1
Treponema_brennaborense_DSM_12168 1 1
Spirochaeta_thermophila_DSM_6192 1 1
Denitrovibrio_acetiphilus_DSM_12809 1 1
Deferribacter_desulfuricans_SSM1 1 1
Flexistipes_sinusarabici_DSM_4947 1 1
Petrotoga_mobilis_SJ95 1 1
Mesotoga_prima_MesG1.Ag.4.2 1 1
Kosmotoga_olearia_TBF_19.5.1 1 1
Persephonella_marina_EX-H1 1 1
Elusimicrobium_minutum_Pei191 1 1
Dictyoglomus_thermophilum_H-6-12 1 1
Caldisericum_exile_AZM16c01 2 2
Candidatus_Solibacter_usitatus_Ellin6076 2 2
Granulicella_tundricola_MP5ACTX9 1 1
Granulicella_mallensis_MP5ACTX8 1 1
Terriglobus_roseus_DSM_18391 1 1
Thermodesulfovibrio_yellowstonii_DSM_11347 2 2
Ilyobacter_polytropus_DSM_2926 1 1
Bacteriovorax_marinus_SJ 1 1
Bdellovibrio_bacteriovorus_HD100 1 1
Sulfurovum_sp._NBC37-1 1 1
Desulfarculus_baarsii_DSM_2075 3 3
Desulfobacca_acetoxidans_DSM_11109 1 1
Syntrophus_aciditrophicus_SB 1 1
Desulfomonile_tiedjei_DSM_6799 2 2
Syntrophobacter_fumaroxidans_MPOB 2 2
Desulfurivibrio_alkaliphilus_AHT2 1 1
Desulfobulbus_propionicus_DSM_2032 1 1
Desulfatibacillum_alkenivorans_AK-01 1 1
Desulfobacterium_autotrophicum_HRM2 1 1
Desulfococcus_oleovorans_Hxd3 3 3
Desulfovibrio_aespoeensis_Aspo-2 4 4
Desulfovibrio_magneticus_RS-1 3 3
Desulfovibrio_salexigens_DSM_2638 2 2
Desulfovibrio_africanus_str._Walvis_Bay 1 1
Geobacter_sp._M21 1 1
Geobacter_uraniireducens_Rf4 1 1
Geobacter_lovleyi_SZ 1 1
Geobacter_bemidjiensis_Bem 1 1
Geobacter_sulfurreducens_KN400 1 1
Geobacter_metallireducens_GS-15 2 2
Pelobacter_propionicus_DSM_2379 1 1
Pelobacter_carbinolicus_DSM_2380 1 1
Sorangium_cellulosum_'So_ce_56' 2 2
Anaeromyxobacter_sp._Fw109-5 1 1
Myxococcus_fulvus_HW-1 1 1
Aromatoleum_aromaticum_EbN1 1 1
Laribacter_hongkongensis_HLHK9 1 1
Methylibium_petroleiphilum_PM1 1 1
Rubrivivax_gelatinosus_IL144 1 1
Leptothrix_cholodnii_SP-6 2 1
Burkholderia_phymatum_STM815 1 1
Burkholderia_xenovorans_LB400 1 1
Ralstonia_eutropha_JMP134 2 2
Cupriavidus_taiwanensis_LMG_19424 1 1
Cupriavidus_necator_N-1 2 2
Ralstonia_eutropha_H16 1 1
Burkholderia_sp._RPE64 2 2
Burkholderia_sp._CCGE1002 1 1
Burkholderia_ambifaria_AMMD 1 1
Burkholderia_cenocepacia_HI2424 1 1
Burkholderia_multivorans_ATCC_17616 1 1
Burkholderia_vietnamiensis_G4 1 1
Polaromonas_naphthalenivorans_CJ2 1 1
Variovorax_paradoxus_S110 2 2
Rhodoferax_ferrireducens_T118 1 1
Herminiimonas_arsenicoxydans 1 1
Collimonas_fungivorans_Ter331 1 1
Janthinobacterium_sp._Marseille 1 1
Herbaspirillum_seropedicae_SmR1 4 3
Advenella_kashmirensis_WT001 2 2
Bordetella_petrii_DSM_12804 2 2
Achromobacter_xylosoxidans 2 2
Rhodobacter_sphaeroides_ATCC_17029 2 1
Paracoccus_denitrificans_PD1222 2 1
Gluconacetobacter_xylinus_NBRC_3288 1 1
Gluconacetobacter_diazotrophicus_PAl_5 1 1
Acetobacter_pasteurianus_IFO_3283-01 1 1
Starkeya_novella_DSM_506 1 1
Xanthobacter_autotrophicus_Py2 2 1
Azorhizobium_caulinodans_ORS_571 4 3
Methylobacterium_sp._4-46 2 1
Methylobacterium_nodulans_ORS_2060 6 4
Ochrobactrum_anthropi_ATCC_49188 1 1
Sinorhizobium_medicae_WSM419 2 1
Sinorhizobium_meliloti_AK83 3 2
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 5 4
Agrobacterium_tumefaciens_str._C58 5 4
Agrobacterium_sp._H13-3 4 3
Mesorhizobium_sp._BNC1 2 1
Mesorhizobium_opportunistum_WSM2075 1 1
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 1 1
Mesorhizobium_loti_MAFF303099 1 1
Oligotropha_carboxidovorans_OM4 1 1
Bradyrhizobium_japonicum_USDA_110 2 1
Bradyrhizobium_sp._ORS_278 2 1
Aeromonas_veronii_B565 1 1
Aeromonas_salmonicida_subsp._salmonicida_A449 1 1
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 1 1
Vibrio_sp._Ex25 2 2
Vibrio_harveyi_ATCC_BAA-1116 1 1
Vibrio_parahaemolyticus_RIMD_2210633 1 1
Vibrio_splendidus_LGP32 1 1
Vibrio_anguillarum_775 2 2
Vibrio_furnissii_NCTC_11218 1 1
Vibrio_vulnificus_MO6-24/O 1 1
Vibrio_cholerae_O395 2 2
Photobacterium_profundum_SS9 1 1
Pseudoalteromonas_atlantica_T6c 1 1
Methylococcus_capsulatus_str._Bath 1 1
Frateuria_aurantia_DSM_6220 1 1
Thioalkalivibrio_sp._K90mix 1 1
Thiocystis_violascens_DSM_198 1 1
Legionella_longbeachae_NSW150 1 1
Xenorhabdus_bovienii_SS-2004 1 1
Providencia_stuartii_MRSN_2154 1 1
Proteus_mirabilis_HI4320 1 1
Rahnella_sp._Y9602 1 1
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 1 1
Yersinia_enterocolitica_subsp._enterocolitica_8081 1 1
Serratia_sp._AS12 1 1
Serratia_sp._ATCC_39006 1 1
Serratia_plymuthica_AS9 1 1
Serratia_proteamaculans_568 1 1
Dickeya_dadantii_Ech703 1 1
Dickeya_zeae_Ech1591 1 1
Pectobacterium_wasabiae_WPP163 1 1
Pectobacterium_sp._SCC3193 1 1
Pectobacterium_atrosepticum_SCRI1043 1 1
Pectobacterium_carotovorum_subsp._carotovorum_PC1 1 1
Pantoea_sp._At-9b 1 1
Pantoea_vagans_C9-1 1 1
Pantoea_ananatis_LMG_20103 1 1
Erwinia_tasmaniensis_Et1/99 2 2
Erwinia_sp._Ejp617 1 1
Erwinia_billingiae_Eb661 1 1
Erwinia_pyrifoliae_Ep1/96 1 1
Erwinia_amylovora_ATCC_49946 1 1
Cronobacter_turicensis_z3032 1 1
Cronobacter_sakazakii_ES15 1 1
Shigella_sonnei_Ss046 1 1
Shigella_flexneri_5_str._8401 1 1
Shigella_dysenteriae_Sd197 1 1
Shigella_boydii_CDC_3083-94 1 1
Salmonella_bongori_NCTC_12419 1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 1 1
Klebsiella_oxytoca_E718 2 2
Klebsiella_variicola_At-22 1 1
Klebsiella_pneumoniae_NTUH-K2044 1 1
Enterobacter_aerogenes_KCTC_2190 1 1
Enterobacter_sp._R4-368 1 1
Enterobacter_sp._638 1 1
Enterobacter_cloacae_subsp._dissolvens_SDM 1 1
Citrobacter_koseri_ATCC_BAA-895 1 1
Candidatus_Korarchaeum_cryptofilum_OPF8 1 1
Acidilobus_saccharovorans_345-15 1 1
Fervidicoccus_fontis_Kam940 1 1
Hyperthermus_butylicus_DSM_5456 1 1
Thermogladius_cellulolyticus_1633 1 1
Aeropyrum_pernix_K1 1 1
Thermosphaera_aggregans_DSM_11486 1 1
Staphylothermus_hellenicus_DSM_12710 1 1
Staphylothermus_marinus_F1 1 1
Desulfurococcus_fermentans_DSM_16532 1 1
Desulfurococcus_kamchatkensis_1221n 1 1
Desulfurococcus_mucosus_DSM_2162 1 1
Thermoproteus_tenax_Kra_1 1 1
halophilic_archaeon_DL31 1 1
Methanocella_arvoryzae_MRE50 1 1
Methanocella_paludicola_SANAE 1 1
Methanosaeta_harundinacea_6Ac 3 3
Methanosaeta_thermophila_PT 2 2
Methanosaeta_concilii_GP6 2 2
Methanosalsum_zhilinae_DSM_4017 1 1
Methanohalobium_evestigatum_Z-7303 1 1
Methanococcoides_burtonii_DSM_6242 2 2
Methanosarcina_acetivorans_C2A 3 3
Methanosarcina_mazei_Go1 2 2
Methanosarcina_barkeri_str._Fusaro 3 3
Methanohalophilus_mahii_DSM_5219 2 2
Methanosphaerula_palustris_E1-9c 1 1
Methanoregula_boonei_6A8 2 2
Methanospirillum_hungatei_JF-1 2 2
Methanoplanus_petrolearius_DSM_11571 1 1
Methanoculleus_bourgensis_MS2 1 1
Methanoculleus_marisnigri_JR1 2 2
Methanopyrus_kandleri_AV19 1 1
Archaeoglobus_fulgidus_DSM_4304 1 1
Thermococcus_sp._4557 1 1
Thermococcus_onnurineus_NA1 1 1
Thermococcus_kodakarensis_KOD1 1 1
Thermococcus_gammatolerans_EJ3 1 1
Thermococcus_sibiricus_MM_739 2 2
Thermococcus_barophilus_MP 1 1
Pyrococcus_sp._ST04 1 1
Pyrococcus_yayanosii_CH1 1 1
Pyrococcus_horikoshii_OT3 1 1
Pyrococcus_abyssi_GE5 1 1
Pyrococcus_furiosus_COM1 1 1
Thermoplasmatales_archaeon_BRNA1 1 1
Thermoplasma_volcanium_GSS1 1 1
Thermoplasma_acidophilum_DSM_1728 1 1
Picrophilus_torridus_DSM_9790 1 1
Salinarchaeum_sp._Harcht-Bsk1 1 1
Halopiger_xanaduensis_SH-6 2 2
Haloterrigena_turkmenica_DSM_5511 3 3
Natrinema_sp._J7-2 1 1
Natrialba_magadii_ATCC_43099 1 1
Halorubrum_lacusprofundi_ATCC_49239 1 1
Haloquadratum_walsbyi_DSM_16790 1 1
Halogeometricum_borinquense_DSM_11551 1 1
Haloferax_mediterranei_ATCC_33500 1 1
Haloferax_volcanii_DS2 2 2
Halomicrobium_mukohataei_DSM_12286 1 1
Halorhabdus_utahensis_DSM_12940 2 2
Natronomonas_pharaonis_DSM_2160 1 1
Haloarcula_hispanica_ATCC_33960 1 1
Haloarcula_marismortui_ATCC_43049 1 1
Halalkalicoccus_jeotgali_B3 1 1
Halobacterium_salinarum_R1 1 1
Halobacterium_sp._NRC-1 1 1
Methanococcus_maripaludis_C5 1 1
Methanococcus_vannielii_SB 1 1
Methanothermobacter_marburgensis_str._Marburg 1 1
Methanothermobacter_thermautotrophicus_str._Delta_H 1 1
Complete_genome_sequence_of_Methanobacterium_sp._Mb1 1 1
Aciduliprofundum_sp._MAR08-339 1 1
Aciduliprofundum_boonei_T469 1 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   5 5
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   2 2
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   1 1
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   1 1
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   1 1
Paracoccidioides_brasiliensis_Pb01_ 1 1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   21 21
Hordeum_vulgare_22   (Domesticated barley)   35 35
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   30 30
Chroococcidiopsis_thermalis_PCC_7203 1 1
Cyanobium_gracile_PCC_6307 1 1
Synechococcus_sp._JA-2-3B'a(2-13) 1 1
Synechococcus_sp._JA-3-3Ab 1 1
Synechococcus_sp._CC9902 2 2
Synechococcus_sp._RCC307 2 2
Synechococcus_sp._CC9605 1 1
Synechococcus_sp._WH_8102 1 1
Synechococcus_sp._WH_7803 1 1
Synechococcus_elongatus_PCC_6301 1 1
Prochlorococcus_marinus_str._NATL1A 1 1
Prochlorococcus_marinus_str._MIT_9301 1 1
Prochlorococcus_marinus_str._AS9601 1 1
Prochlorococcus_marinus_subsp._marinus_str._CCMP1375 1 1
Prochlorococcus_marinus_subsp._pastoris_str._CCMP1986 1 1
Prochlorococcus_marinus_str._MIT_9215 1 1
Prochlorococcus_marinus_str._MIT_9211 1 1
Prochlorococcus_marinus_str._MIT_9313 1 1
Prochlorococcus_marinus_str._MIT_9312 1 1
Prochlorococcus_marinus_str._MIT_9303 1 1
Prochlorococcus_marinus_str._NATL2A 1 1
Crinalium_epipsammum_PCC_9333 1 1
Cyanothece_sp._PCC_7425 1 1
Spiroplasma_diminutum_CUAS-1 1 1
Spiroplasma_taiwanense_CT-1 1 1
Spiroplasma_apis_B31 1 1
Streptomyces_rapamycinicus_NRRL_5491 1 1
Streptomyces_collinus_Tu_365 1 1
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 1 1
Propionibacterium_acidipropionici_ATCC_4875 1 1
Mycobacterium_liflandii_128FXT 1 1
Corynebacterium_terpenotabidum_Y-11 1 1
Corynebacterium_ulcerans_BR-AD22 1 1
Corynebacterium_ulcerans_809 1 1
Corynebacterium_pseudotuberculosis_258 1 1
Corynebacterium_pseudotuberculosis_Cp162 1 1
Corynebacterium_pseudotuberculosis_P54B96 1 1
Corynebacterium_pseudotuberculosis_267 1 1
Corynebacterium_pseudotuberculosis_1/06-A 1 1
Corynebacterium_pseudotuberculosis_42/02-A 1 1
Corynebacterium_pseudotuberculosis_3/99-5 1 1
Corynebacterium_pseudotuberculosis_31 1 1
Corynebacterium_pseudotuberculosis_CIP_52.97 1 1
Corynebacterium_pseudotuberculosis_PAT10 1 1
Corynebacterium_pseudotuberculosis_I19 1 1
Corynebacterium_pseudotuberculosis_FRC41 1 1
Corynebacterium_pseudotuberculosis_C231 1 1
Corynebacterium_pseudotuberculosis_1002 1 1
Corynebacterium_diphtheriae_BH8 1 1
Corynebacterium_diphtheriae_INCA_402 1 1
Corynebacterium_diphtheriae_VA01 1 1
Corynebacterium_diphtheriae_HC04 1 1
Corynebacterium_diphtheriae_HC03 1 1
Corynebacterium_diphtheriae_HC02 1 1
Corynebacterium_diphtheriae_HC01 1 1
Corynebacterium_diphtheriae_241 1 1
Corynebacterium_diphtheriae_CDCE_8392 1 1
Corynebacterium_diphtheriae_PW8 1 1
Corynebacterium_diphtheriae_C7_(beta) 1 1
Corynebacterium_diphtheriae_31A 1 1
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 1 1
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 1 1
Bifidobacterium_breve_UCC2003 1 1
Bifidobacterium_bifidum_PRL2010 1 1
Bifidobacterium_bifidum_BGN4 1 1
Dehalococcoides_mccartyi_GY50 1 1
Dehalococcoides_mccartyi_DCMB5 1 1
Dehalococcoides_mccartyi_BTF08 1 1
Dehalococcoides_sp._GT 1 1
Dehalococcoides_sp._VS 1 1
Dehalococcoides_sp._CBDB1 1 1
Erysipelothrix_rhusiopathiae_SY1027 1 1
Desulfotomaculum_gibsoniae_DSM_7213 1 1
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 1 1
Clostridium_autoethanogenum_DSM_10061 1 1
Clostridium_tetani_genome_12124569 1 1
Clostridium_pasteurianum_BC1 1 1
Clostridium_acetobutylicum_DSM_1731 1 1
Clostridium_acetobutylicum_EA_2018 1 1
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 1 1
Thermoanaerobacterium_thermosaccharolyticum_M0795 1 1
Thermoanaerobacter_sp._X513 1 1
Halobacteroides_halobius_DSM_5150 1 1
Carnobacterium_maltaromaticum_LMA28 1 1
Enterococcus_mundtii_QU_25 1 1
Enterococcus_casseliflavus_EC20 1 1
Enterococcus_faecium_Aus0085 1 1
Enterococcus_faecium_NRRL_B-2354 1 1
Enterococcus_faecium_DO 1 1
Enterococcus_faecalis_str._Symbioflor_1 1 1
Enterococcus_faecalis_D32 1 1
Enterococcus_faecalis_OG1RF 1 1
Enterococcus_faecalis_V583 1 1
Leuconostoc_carnosum_JB16 1 1
Leuconostoc_mesenteroides_subsp._mesenteroides_J18 2 2
Leuconostoc_gelidum_JB7 1 1
Lactobacillus_paracasei_subsp._paracasei_8700:2 1 1
Lactobacillus_casei_LOCK919 1 1
Lactobacillus_casei_W56 1 1
Lactobacillus_casei_LC2W 1 1
Lactobacillus_casei_BD-II 1 1
Lactobacillus_casei_BL23 1 1
Lactobacillus_casei_str._Zhang 1 1
Lactobacillus_rhamnosus_LOCK908 1 1
Lactobacillus_rhamnosus_LOCK900 1 1
Lactobacillus_rhamnosus_ATCC_8530 1 1
Lactobacillus_rhamnosus_GG 1 1
Lactobacillus_rhamnosus_GG 1 1
Lactobacillus_johnsonii_N6.2 1 1
Lactobacillus_johnsonii_DPC_6026 1 1
Lactobacillus_johnsonii_NCC_533 1 1
Lactobacillus_salivarius_UCC118 1 1
Lactobacillus_fermentum_F-6 1 1
Lactobacillus_fermentum_CECT_5716 1 1
Lactobacillus_reuteri_TD1 1 1
Lactobacillus_reuteri_I5007 1 1
Lactobacillus_reuteri_JCM_1112 1 1
Lactobacillus_reuteri_SD2112 1 1
Lactobacillus_plantarum_16 1 1
Lactobacillus_plantarum_ZJ316 1 1
Lactobacillus_plantarum_subsp._plantarum_ST-III 1 1
Lactobacillus_plantarum_subsp._plantarum_P-8 1 1
Lactobacillus_plantarum_WCFS1 1 1
Lactobacillus_brevis_KB290 1 1
Pediococcus_pentosaceus_SL4 1 1
Lactococcus_garvieae_Lg2 2 2
Lactococcus_lactis_subsp._lactis_KLDS_4.0325 2 2
Lactococcus_lactis_subsp._lactis_IO-1 2 2
Lactococcus_lactis_subsp._lactis_CV56 2 2
Lactococcus_lactis_subsp._lactis_KF147 2 2
Lactococcus_lactis_subsp._lactis_Il1403 2 2
Lactococcus_lactis_subsp._cremoris_KW2 2 2
Lactococcus_lactis_subsp._cremoris_UC509.9 3 3
Lactococcus_lactis_subsp._cremoris_A76 2 2
Lactococcus_lactis_subsp._cremoris_NZ9000 2 2
Lactococcus_lactis_subsp._cremoris_SK11 2 2
Streptococcus_constellatus_subsp._pharyngis_C1050 1 1
Streptococcus_constellatus_subsp._pharyngis_C818 1 1
Streptococcus_constellatus_subsp._pharyngis_C232 1 1
Streptococcus_intermedius_B196 1 1
Streptococcus_intermedius_C270 1 1
Streptococcus_anginosus_C238 1 1
Streptococcus_anginosus_C1051 1 1
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_BAA-2069 1 1
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_43143 1 1
Streptococcus_lutetiensis_033 1 1
Streptococcus_oligofermentans_AS_1.3089 1 1
Streptococcus_parasanguinis_FW213 1 1
Streptococcus_pneumoniae_A026 1 1
Streptococcus_pneumoniae_ST556 1 1
Streptococcus_pneumoniae_SPNA45 1 1
Streptococcus_pneumoniae_SPN994039 1 1
Streptococcus_pneumoniae_SPN994038 1 1
Streptococcus_pneumoniae_SPN034183 1 1
Streptococcus_pneumoniae_SPN034156 1 1
Streptococcus_pneumoniae_INV104 1 1
Streptococcus_pneumoniae_INV200 1 1
Streptococcus_pneumoniae_OXC141 1 1
Streptococcus_pneumoniae_gamPNI0373 1 1
Streptococcus_pneumoniae_AP200 1 1
Streptococcus_pneumoniae_ATCC_700669 1 1
Streptococcus_pneumoniae_TCH8431/19A 1 1
Streptococcus_pneumoniae_CGSP14 1 1
Streptococcus_pneumoniae_G54 1 1
Streptococcus_pneumoniae_JJA 1 1
Streptococcus_pneumoniae_70585 1 1
Streptococcus_pneumoniae_Hungary19A-6 1 1
Streptococcus_pneumoniae_Taiwan19F-14 1 1
Streptococcus_pneumoniae_D39 1 1
Streptococcus_pneumoniae_670-6B 1 1
Streptococcus_pneumoniae_R6 1 1
Streptococcus_pneumoniae_TIGR4 1 1
Streptococcus_agalactiae_ILRI112 1 1
Streptococcus_agalactiae_ILRI005 1 1
Streptococcus_agalactiae_09mas018883 1 1
Streptococcus_agalactiae_2-22 1 1
Streptococcus_agalactiae_SA20-06 1 1
Streptococcus_agalactiae_GD201008-001 1 1
Streptococcus_agalactiae_NEM316 1 1
Streptococcus_agalactiae_2603V/R 1 1
Streptococcus_mutans_GS-5 1 1
Streptococcus_mutans_LJ23 1 1
Streptococcus_mutans_UA159 1 1
Streptococcus_thermophilus_JIM_8232 1 1
Streptococcus_thermophilus_ND03 1 1
Streptococcus_thermophilus_CNRZ1066 1 1
Streptococcus_thermophilus_LMG_18311 1 1
Streptococcus_suis_T15 1 1
Streptococcus_suis_TL13 1 1
Streptococcus_suis_SC070731 1 1
Streptococcus_suis_S735 1 1
Streptococcus_suis_ST3 1 1
Streptococcus_suis_D9 1 1
Streptococcus_suis_SS12 1 1
Streptococcus_suis_D12 1 1
Streptococcus_suis_ST1 1 1
Streptococcus_suis_A7 1 1
Streptococcus_suis_JS14 1 1
Streptococcus_suis_BM407 1 1
Streptococcus_suis_SC84 1 1
Streptococcus_suis_GZ1 1 1
Streptococcus_suis_98HAH33 1 1
Streptococcus_suis_05ZYH33 1 1
Streptococcus_salivarius_CCHSS3 1 1
Streptococcus_salivarius_JIM8777 1 1
Exiguobacterium_antarcticum_B7 1 1
Paenibacillus_polymyxa_CR1 1 1
Paenibacillus_polymyxa_SC2 1 1
Paenibacillus_polymyxa_E681 1 1
Listeria_monocytogenes_EGD_sequence 1 1
Listeria_monocytogenes_N53-1 2 2
Listeria_monocytogenes_La111 2 2
Listeria_monocytogenes_serotype_4b_str._LL195 1 1
Listeria_monocytogenes_07PF0776 1 1
Listeria_monocytogenes_M7 1 1
Listeria_monocytogenes_J1-220 1 1
Listeria_monocytogenes_J1816 1 1
Listeria_monocytogenes_SLCC2376 1 1
Listeria_monocytogenes_SLCC5850 1 1
Listeria_monocytogenes_ATCC_19117 1 1
Listeria_monocytogenes_L312 1 1
Listeria_monocytogenes_SLCC2479 1 1
Listeria_monocytogenes_SLCC7179 1 1
Listeria_monocytogenes_SLCC2540 1 1
Listeria_monocytogenes_SLCC2378 1 1
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 1 1
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 1 1
Listeria_monocytogenes_serotype_7_str._SLCC2482 1 1
Listeria_monocytogenes_08-5578 1 1
Listeria_monocytogenes_08-5923 1 1
Listeria_monocytogenes_L99 1 1
Listeria_monocytogenes_HCC23 1 1
Listeria_monocytogenes_10403S 1 1
Listeria_monocytogenes_J0161 1 1
Listeria_monocytogenes_Finland_1998 1 1
Listeria_monocytogenes_FSL_R2-561 1 1
Listeria_monocytogenes_serotype_4b_str._F2365 1 1
Listeria_monocytogenes_EGD-e 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 1 1
Bacillus_amyloliquefaciens_LFB112 1 1
Bacillus_amyloliquefaciens_CC178 1 1
Bacillus_amyloliquefaciens_Y2 1 1
Bacillus_amyloliquefaciens_IT-45 1 1
Bacillus_amyloliquefaciens_XH7 1 1
Bacillus_amyloliquefaciens_LL3 1 1
Bacillus_amyloliquefaciens_TA208 1 1
Bacillus_amyloliquefaciens_DSM_7 1 1
Bacillus_licheniformis_9945A 1 1
Bacillus_subtilis_PY79 1 1
Bacillus_subtilis_XF-1 1 1
Bacillus_subtilis_QB928 1 1
Bacillus_subtilis_BSn5 1 1
Bacillus_subtilis_subsp._subtilis_str._BAB-1 1 1
Bacillus_subtilis_subsp._subtilis_str._BSP1 1 1
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 1 1
Bacillus_subtilis_subsp._subtilis_6051-HGW 1 1
Bacillus_subtilis_subsp._spizizenii_TU-B-10 1 1
Bacillus_subtilis_subsp._spizizenii_str._W23 1 1
Bacillus_subtilis_subsp._natto_BEST195 1 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 1 1
Bacillus_toyonensis_BCT-7112 1 1
Bacillus_thuringiensis_HD-771 1 1
Bacillus_thuringiensis_HD-789 1 1
Bacillus_thuringiensis_MC28 1 1
Bacillus_thuringiensis_serovar_chinensis_CT-43 1 1
Bacillus_thuringiensis_YBT-1518 1 1
Bacillus_thuringiensis_Bt407 1 1
Bacillus_thuringiensis_serovar_konkukian_str._97-27 1 1
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 1 1
Bacillus_thuringiensis_BMB171 1 1
Bacillus_thuringiensis_serovar_finitimus_YBT-020 1 1
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 1 1
Bacillus_cereus_FRI-35 1 1
Bacillus_cereus_biovar_anthracis_str._CI 1 1
Bacillus_cereus_AH820 1 1
Bacillus_cereus_AH187 1 1
Bacillus_cereus_B4264 1 1
Bacillus_cereus_G9842 1 1
Bacillus_cereus_Q1 1 1
Bacillus_cereus_F837/76 1 1
Bacillus_cereus_NC7401 1 1
Bacillus_cereus_E33L 1 1
Bacillus_cereus_ATCC_14579 1 1
Bacillus_cereus_ATCC_10987 1 1
Bacillus_anthracis_str._H9401 1 1
Bacillus_anthracis_str._CDC_684 1 1
Bacillus_anthracis_str._'Ames_Ancestor' 1 1
Bacillus_anthracis_str._Sterne 1 1
Bacillus_anthracis_str._Ames 1 1
Bacillus_megaterium_WSH-002 1 1
Bacillus_megaterium_QM_B1551 1 1
Bacillus_coagulans_36D1 1 1
Staphylococcus_aureus_subsp._aureus_MSHR1132 3 3
Staphylococcus_pseudintermedius_ED99 2 2
Staphylococcus_pasteuri_SP1 1 1
Staphylococcus_lugdunensis_N920143 1 1
Staphylococcus_warneri_SG1 1 1
Staphylococcus_epidermidis_ATCC_12228 1 1
Staphylococcus_aureus_CA-347 3 3
Staphylococcus_aureus_Bmb9393 3 3
Staphylococcus_aureus_M1 3 3
Staphylococcus_aureus_08BA02176 3 3
Staphylococcus_aureus_ST228/18412 2 2
Staphylococcus_aureus_ST228/18341 2 2
Staphylococcus_aureus_ST228/16125 2 2
Staphylococcus_aureus_ST228/16035 2 2
Staphylococcus_aureus_ST228/15532 2 2
Staphylococcus_aureus_ST228/10497 2 2
Staphylococcus_aureus_ST228/10388 2 2
Staphylococcus_aureus_04-02981 3 3
Staphylococcus_aureus_RF122 3 3
Staphylococcus_aureus_subsp._aureus_Z172 3 3
Staphylococcus_aureus_subsp._aureus_6850 3 3
Staphylococcus_aureus_subsp._aureus_SA957 3 3
Staphylococcus_aureus_subsp._aureus_CN1 3 3
Staphylococcus_aureus_subsp._aureus_SA40 3 3
Staphylococcus_aureus_subsp._aureus_11819-97 3 3
Staphylococcus_aureus_subsp._aureus_M013 3 3
Staphylococcus_aureus_subsp._aureus_HO_5096_0412 3 3
Staphylococcus_aureus_subsp._aureus_VC40 3 3
Staphylococcus_aureus_subsp._aureus_T0131 3 3
Staphylococcus_aureus_subsp._aureus_LGA251 3 3
Staphylococcus_aureus_subsp._aureus_ECT-R_2 3 3
Staphylococcus_aureus_subsp._aureus_JKD6159 3 3
Staphylococcus_aureus_subsp._aureus_ED133 3 3
Staphylococcus_aureus_subsp._aureus_ED98 3 3
Staphylococcus_aureus_subsp._aureus_TW20 3 3
Staphylococcus_aureus_subsp._aureus_55/2053 3 3
Staphylococcus_aureus_subsp._aureus_TCH60 3 3
Staphylococcus_aureus_subsp._aureus_str._JKD6008 3 3
Staphylococcus_aureus_subsp._aureus_71193 3 3
Staphylococcus_aureus_subsp._aureus_S0385 3 3
Staphylococcus_aureus_subsp._aureus_str._Newman 3 3
Staphylococcus_aureus_subsp._aureus_Mu3 3 3
Staphylococcus_aureus_subsp._aureus_USA300_TCH1516 2 2
Staphylococcus_aureus_subsp._aureus_USA300_FPR3757 3 3
Staphylococcus_aureus_subsp._aureus_JH9 3 3
Staphylococcus_aureus_subsp._aureus_MSSA476 3 3
Staphylococcus_aureus_subsp._aureus_MRSA252 3 3
Staphylococcus_aureus_subsp._aureus_MW2 3 3
Staphylococcus_aureus_subsp._aureus_N315 3 3
Staphylococcus_aureus_subsp._aureus_Mu50 3 3
Staphylococcus_aureus_subsp._aureus_COL 3 3
Staphylococcus_aureus_subsp._aureus_NCTC_8325 3 3
Chlorobium_phaeobacteroides_BS1 2 2
Nonlabens_dokdonensis_DSW-6 1 1
Psychroflexus_torquis_ATCC_700755 1 1
Singulisphaera_acidiphila_DSM_18658 1 1
Spirochaeta_thermophila_DSM_6578 1 1
Bdellovibrio_bacteriovorus_str._Tiberius 1 1
Desulfocapsa_sulfexigens_DSM_10523 1 1
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 2 2
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 2 2
Desulfovibrio_desulfuricans_ND132 1 1
Geobacter_sp._M18 1 1
Geobacter_sulfurreducens_PCA 1 1
Pandoraea_pnomenusa_3kgm 2 2
Burkholderia_sp._YI23 2 2
Burkholderia_sp._CCGE1003 2 2
Burkholderia_sp._KJ006 1 1
Burkholderia_lata 1 1
Burkholderia_ambifaria_MC40-6 1 1
Burkholderia_cenocepacia_MC0-3 1 1
Burkholderia_cenocepacia_AU_1054 1 1
Burkholderia_cenocepacia_J2315 1 1
Burkholderia_multivorans_ATCC_17616 1 1
Burkholderia_cepacia_GG4 1 1
Variovorax_paradoxus_B4 2 2
Variovorax_paradoxus_EPS 2 2
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 2 2
Octadecabacter_arcticus_238 1 1
Rhodobacter_sphaeroides_KD131 2 1
Gluconacetobacter_diazotrophicus_PAl_5 1 1
Acetobacter_pasteurianus_386B 1 1
Acetobacter_pasteurianus_IFO_3283-12 1 1
Acetobacter_pasteurianus_IFO_3283-01-42C 1 1
Acetobacter_pasteurianus_IFO_3283-32 1 1
Acetobacter_pasteurianus_IFO_3283-26 1 1
Acetobacter_pasteurianus_IFO_3283-22 1 1
Acetobacter_pasteurianus_IFO_3283-07 1 1
Acetobacter_pasteurianus_IFO_3283-03 1 1
Sinorhizobium_meliloti_2011 3 2
Sinorhizobium_meliloti_GR4 3 2
Sinorhizobium_meliloti_Rm41 3 2
Sinorhizobium_meliloti_SM11 3 2
Sinorhizobium_meliloti_BL225C 3 2
Sinorhizobium_meliloti_1021 3 2
Rhizobium_leguminosarum_bv._trifolii_WSM2304 2 1
Mesorhizobium_australicum_WSM2073 1 1
Oligotropha_carboxidovorans_OM5 1 1
Oligotropha_carboxidovorans_OM5 1 1
Bradyrhizobium_sp._S23321 2 1
Bradyrhizobium_sp._BTAi1 2 1
Bradyrhizobium_oligotrophicum_S58 2 1
Bradyrhizobium_japonicum_USDA_6 2 1
Aeromonas_hydrophila_ML09-119 1 1
Vibrio_sp._EJY3 1 1
Vibrio_parahaemolyticus_BB22OP 1 1
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 2 2
Vibrio_anguillarum_Listonella_anguillarum_M3 2 2
Vibrio_nigripulchritudo_VibrioScope 1 1
Vibrio_vulnificus_CMCP6 1 1
Vibrio_vulnificus_YJ016 1 1
Vibrio_cholerae_LMA3984-4 2 2
Vibrio_cholerae_M66-2 2 2
Vibrio_cholerae_O395 2 2
Vibrio_cholerae_IEC224 2 2
Vibrio_cholerae_O1_str._2010EL-1786 3 3
Vibrio_cholerae_MJ-1236 1 1
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 2 2
Alcanivorax_dieselolei_B5 1 1
Coxiella_burnetii_CbuG_Q212 1 1
Coxiella_burnetii_RSA_493 1 1
Proteus_mirabilis_BB2000 1 1
Rahnella_aquatilis_HX2 1 1
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 1 1
Yersinia_enterocolitica_subsp._palearctica_Y11 1 1
Serratia_sp._AS13 1 1
Serratia_plymuthica_S13 1 1
Serratia_plymuthica_4Rx13 1 1
Serratia_marcescens_FGI94 1 1
Serratia_marcescens_WW4 1 1
Serratia_liquefaciens_ATCC_27592 1 1
Dickeya_dadantii_Ech586 1 1
Dickeya_dadantii_3937 1 1
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 1 1
Pantoea_ananatis_LMG_5342 1 1
Pantoea_ananatis_PA13 1 1
Pantoea_ananatis_AJ13355 1 1
Erwinia_pyrifoliae_DSM_12163 1 1
Erwinia_amylovora_CFBP1430 1 1
Cronobacter_sakazakii_CMCC_45402 1 1
Cronobacter_sakazakii_SP291 1 1
Cronobacter_sakazakii_ATCC_BAA-894 1 1
Raoultella_ornithinolytica_B6 1 1
Shigella_sonnei_53G 1 1
Shigella_flexneri_2002017 1 1
Shigella_flexneri_2a_str._2457T 1 1
Shigella_flexneri_2a_str._301 1 1
Shigella_dysenteriae_1617 1 1
Shigella_boydii_Sb227 1 1
Salmonella_bongori_N268-08 1 1
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 1 1
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 1 1
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 1 1
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 1 1
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 1 1
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 1 1
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 1 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 1 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 1 1
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 1 1
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 1 1
Salmonella_enterica_serovar_Bovismorbificans_genomics 1 1
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 1 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 1 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 1 1
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 1 1
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 1 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 1 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 1 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 1 1
Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 1 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 1 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 1 1
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 1 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 1 1
Klebsiella_oxytoca_KCTC_1686 2 2
Klebsiella_pneumoniae_JM45 1 1
Klebsiella_pneumoniae_CG43 1 1
Klebsiella_pneumoniae_KCTC_2242 1 1
Klebsiella_pneumoniae_342 1 1
Klebsiella_pneumoniae_subsp._pneumoniae_1084 1 1
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 1 1
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 1 1
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 1 1
Enterobacter_aerogenes_EA1509E 1 1
Escherichia_coli_E24377A 1 1
Escherichia_coli_E._coli_PMV-1 1 1
Escherichia_coli_JJ1886 1 1
Escherichia_coli_LY180 1 1
Escherichia_coli_APEC_O78 1 1
Escherichia_coli_O7:K1_str._CE10 1 1
Escherichia_coli_O104:H4_str._2009EL-2050 1 1
Escherichia_coli_O104:H4_str._2009EL-2071 1 1
Escherichia_coli_O104:H4_str._2011C-3493 1 1
Escherichia_coli_NA114 1 1
Escherichia_coli_str._'clone_D_i2' 1 1
Escherichia_coli_str._'clone_D_i14' 1 1
Escherichia_coli_UM146 1 1
Escherichia_coli_Xuzhou21 1 1
Escherichia_coli_IHE3034 1 1
Escherichia_coli_O83:H1_str._NRG_857C 1 1
Escherichia_coli_ABU_83972 1 1
Escherichia_coli_KO11FL 1 1
Escherichia_coli_KO11FL 1 1
Escherichia_coli_LF82 1 1
Escherichia_coli_ED1a 1 1
Escherichia_coli_IAI39 1 1
Escherichia_coli_UMN026 1 1
Escherichia_coli_55989 1 1
Escherichia_coli_S88 1 1
Escherichia_coli_IAI1 1 1
Escherichia_coli_W 1 1
Escherichia_coli_W 1 1
Escherichia_coli_SMS-3-5 1 1
Escherichia_coli_SE15 1 1
Escherichia_coli_SE11 1 1
Escherichia_coli_APEC_O1 1 1
Escherichia_coli_O103:H2_str._12009 1 1
Escherichia_coli_UTI89 1 1
Escherichia_coli_536 1 1
Escherichia_coli_O55:H7_str._RM12579 1 1
Escherichia_coli_O55:H7_str._CB9615 1 1
Escherichia_coli_O26:H11_str._11368 1 1
Escherichia_coli_CFT073 1 1
Escherichia_coli_O111:H-_str._11128 1 1
Escherichia_coli_O127:H6_str._E2348/69 1 1
Escherichia_coli_O157:H7_str._TW14359 1 1
Escherichia_coli_O157:H7_str._EC4115 1 1
Escherichia_coli_O157:H7_str._Sakai 1 1
Escherichia_coli_O157:H7_str._EDL933 1 1
Enterobacter_cloacae_EcWSU1 1 1
Enterobacter_cloacae_subsp._cloacae_ENHKU01 1 1
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 1 1
Aeropyrum_camini_SY1_=_JCM_12091 1 1
Methanomethylovorans_hollandica_DSM_15978 2 2
Methanolobus_psychrophilus_R15 2 2
Methanosarcina_mazei_Tuc01 2 2
Methanoregula_formicica_Methanoregula_formicicum_SMSP 2 2
Thermococcus_sp._AM4 1 1
Thermococcus_sp._CL1 1 1
Thermococcus_litoralis_DSM_5473 1 1
Pyrococcus_sp._NA2 1 1
Pyrococcus_furiosus_DSM_3638 1 1
Candidatus_Methanomethylophilus_alvus_Mx1201 1 1
Candidatus_Methanomassiliicoccus_intestinalis_Issoire-Mx1 1 1
Ferroplasma_acidarmanus_fer1 1 1
Halovivax_ruber_XH-70 1 1
Natrinema_pellirubrum_DSM_15624 1 1
Natronococcus_occultus_SP4 1 1
Natronobacterium_gregoryi_SP2 1 1
Haloquadratum_walsbyi_C23 1 1
Halorhabdus_tiamatea_SARL4B 2 2
Natronomonas_moolapensis_8.8.11 1 1
Haloarcula_hispanica_N601 1 1
Methanococcus_maripaludis_X1 1 1
Methanococcus_maripaludis_C6 1 1
Methanococcus_maripaludis_C7 1 1
Methanococcus_maripaludis_S2 1 1
Methanobacterium_sp._SWAN-1 1 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   1 1
Pan_troglodytes_69_2.1.4   (Chimpanzee)   1 1
Gorilla_gorilla_69_3.1   (Western gorilla)   1 1
Pongo_abelii_69_2   (Sumatran orangutan)   1 1
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   1 1
Macaca_mulatta_69_1   (Rhesus monkey)   1 1
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   1 1
Otolemur_garnettii_69_3   (Small-eared galago)   1 1
Rattus_norvegicus_69_3.4   (Norway rat)   1 1
Mus_musculus_69_38   (House mouse)   1 1
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1 1
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   1 1
Cavia_porcellus_69_3   (Domestic guinea pig)   1 1
Oryctolagus_cuniculus_69_2   (Rabbit)   1 1
Ochotona_princeps_69   (American pika)   1 1
Tupaia_belangeri_69   (Northern tree shrew)   1 1
Sus_scrofa_69_10.2   (Pig)   1 1
Bos_taurus_69_3.1   (Cattle)   1 1
Vicugna_pacos_69_1   (Alpaca)   1 1
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1 1
Mustela_putorius_furo_69_1.0   (Domestic ferret)   1 1
Ailuropoda_melanoleuca_69_1   (Giant panda)   1 1
Canis_familiaris_69_3.1   (Dog)   1 1
Felis_catus_69   (Domestic cat)   2 1
Equus_caballus_69_2   (Horse)   1 1
Myotis_lucifugus_69_2.0   (Little brown bat)   1 1
Pteropus_vampyrus_69_1   (Large flying fox)   1 1
Sorex_araneus_69_1   (European shrew)   1 1
Erinaceus_europaeus_69   (Western European hedgehog)   1 1
Procavia_capensis_69_1   (Cape rock hyrax)   2 1
Loxodonta_africana_69_3   (African savanna elephant)   1 1
Echinops_telfairi_69   (Small Madagascar hedgehog)   2 1
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   3 2
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   1 1
Macropus_eugenii_69_1.0   (Tammar wallaby)   1 1
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1 1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1 1
Ornithorhynchus_anatinus_69_5   (Platypus)   1 1
Meleagris_gallopavo_69_2   (Turkey)   1 1
Gallus_gallus_69_2   (Chicken)   1 1
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   1 1
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   1 1
Anolis_carolinensis_69_2.0   (Green anole)   1 1
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   1 1
Latimeria_chalumnae_69_1   (Coelacanth)   3 3
Gadus_morhua_69_1   (Atlantic cod)   2 2
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   1 1
Takifugu_rubripes_69_4   (Torafugu)   1 1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   2 2
Oryzias_latipes_69_1   (Japanese medaka)   2 2
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   2 2
Oreochromis_niloticus_69_1.0   (Nile tilapia)   1 1
Danio_rerio_69_9   (Zebrafish)   1 1
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   1 1
Ciona_intestinalis_69   (Vase tunicate)   1 1
Drosophila_melanogaster_69_5   (Fruit fly)   2 2
Caenorhabditis_elegans_69_215   (Roundworm)   1 1
Arabidopsis_thaliana_10   (Thale cress)   32 32

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   13 13
Homo_sapiens__(NCBI_version)   (Human)   1 1
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   1 1
Heliconius_numata__(Incomplete) 3 3
Lotus_japonicus__(Early_assembly) 36 36
Malus_x_domestica_(Duplicate)   (Apple)   55 54
Ricinus_communis__(Early_assembly)   (Castor bean)   22 22
Nicotiana_benthamiana_0.4.4_(Early_draft) 70 67
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   33 33
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   33 33
Phoenix_dactylifera__(Early_draft)   (Date palm)   9 8
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 1 1
NCBI_plasmid_sequences_(Plasmids) 30 28
NCBI_viral_sequences_(Viral) 1 1
Protozoadb_2010_08_(Protozoadb) 4 4
TargetDB__(Targets) 47 47
STRING_v9.0.5_(STRING) 819 796
Uniprot_2018_03_genome 14045 13642
NCBI_2017_08_genome 77449 76817
Protein_Data_Bank_(all_PDB_sequenc) 29 29
PDB_chains_(SCOP_1.75)_(PDB) 5 5
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 77 77

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]