SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for PA2201 N-terminal domain-like superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a PA2201 N-terminal domain-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Phytophthora_capsici_ 1 1
Comamonas_testosteroni_CNB-2 1 1
Pseudomonas_aeruginosa_UCBPP-PA14 1 1

Strains
Genome     Number   Proteins
Pseudomonas_aeruginosa_SCV20265 1 1
Pseudomonas_aeruginosa_MTB-1 1 1
Pseudomonas_aeruginosa_LES431 1 1
Pseudomonas_aeruginosa_RP73 1 1
Pseudomonas_aeruginosa_B136-33 1 1
Pseudomonas_aeruginosa_PA1R 1 1
Pseudomonas_aeruginosa_PA1 1 1
Pseudomonas_aeruginosa_DK2 1 1
Pseudomonas_aeruginosa_NCGM2.S1 1 1
Pseudomonas_aeruginosa_M18 1 1
Pseudomonas_aeruginosa_LESB58 1 1
Pseudomonas_aeruginosa_PA7 1 1
Pseudomonas_aeruginosa_PAO1 1 1

Others
Genome     Number   Proteins
Protein_Data_Bank_(all_PDB_sequenc) 3 3
STRING_v9.0.5_(STRING) 5 5
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 9 9
Uniprot_2018_03_genome 57 57
PDB_chains_(SCOP_1.75)_(PDB) 1 1
NCBI_2017_08_genome 2380 2380
TargetDB__(Targets) 1 1

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