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Domain combinations for Pseudo ankyrin repeat-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Pseudo ankyrin repeat-like domain in that genome.

Complete genomes
Genome Number Proteins

Homo_sapiens_76_38 (Human) 3 3

Pan_troglodytes_76_2.1.4 (Chimpanzee) 1 1

Gorilla_gorilla_76_3.1 (Western gorilla) 1 1

Pongo_abelii_76_2 (Sumatran orangutan) 1 1

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 2 2

Papio_anubis_76 (Olive baboon) 1 1

Macaca_mulatta_76_1 (Rhesus monkey) 3 3

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 4 4

Otolemur_garnettii_76_3 (Small-eared galago) 2 2

Microcebus_murinus_76_1 (Gray mouse lemur) 1 1

Rattus_norvegicus_76_5.0 (Norway rat) 2 2

Mus_musculus_76_38 (House mouse) 2 2

Ictidomys_tridecemlineatus_76_2 (Thirteen-lined ground squirrel) 1 1

Heterocephalus_glaber_v1.7-2 (Naked mole-rat) 1 1

Cavia_porcellus_76_3 (Domestic guinea pig) 2 2

Oryctolagus_cuniculus_76_2 (Rabbit) 1 1

Ochotona_princeps_76 (American pika) 2 2

Tupaia_belangeri_76 (Northern tree shrew) 2 2

Bos_taurus_76_3.1 (Cattle) 2 2

Ovis_aries_76_3.1 (Sheep) 3 3

Tursiops_truncatus_76_1 (Bottlenose dolphin) 2 2

Mustela_putorius_furo_76_1.0 (Domestic ferret) 2 2

Ailuropoda_melanoleuca_76_1 (Giant panda) 2 2

Canis_familiaris_76_3.1 (Dog) 4 4

Felis_catus_76_6.2 (Domestic cat) 2 2

Equus_caballus_76_2 (Horse) 2 2

Myotis_lucifugus_76_2.0 (Little brown bat) 2 2

Procavia_capensis_76_1 (Cape rock hyrax) 2 2

Loxodonta_africana_76_3 (African savanna elephant) 1 1

Dasypus_novemcinctus_76_2 (Nine-banded armadillo) 2 2

Choloepus_hoffmanni_76_1 (Hoffmann's two-fingered sloth) 3 3

Sarcophilus_harrisii_76_7.0 (Tasmanian devil) 1 1

Ornithorhynchus_anatinus_76_5 (Platypus) 2 2

Saccoglossus_kowalevskii_v3.0 1 1

Pelodiscus_sinensis_76_1.0 (Chinese soft-shelled turtle) 1 1

Latimeria_chalumnae_76_1 (Coelacanth) 1 1

Tetraodon_nigroviridis_76_8 (Spotted green pufferfish) 1 1

Takifugu_rubripes_76_4 (Torafugu) 2 2

Gasterosteus_aculeatus_76_1 (Three-spined stickleback) 1 1

Oryzias_latipes_76_1 (Japanese medaka) 1 1

Xiphophorus_maculatus_76_4.4.2 (Southern platyfish) 1 1

Poecilia_formosa_76 (Amazon molly) 1 1

Danio_rerio_76_9 (Zebrafish) 1 1

Oikopleura_dioica 1 1

Strongylocentrotus_purpuratus_v3.1 (Purple sea urchin) 3 3

Adineta_vaga 6 6

Crassostrea_gigas_22 (Pacific oyster) 2 2

Lottia_gigantea_ (Owl limpet) 2 2

Helobdella_robusta_ 1 1

Capitella_sp._I_ 1 1

Nasonia_vitripennis_ (Jewel wasp) 1 1

Aedes_aegypti_55_(Not_maintained) (Yellow fever mosquito) 3 2

Acyrthosiphon_pisum_ (Pea aphid) 22 17

Daphnia_pulex_ (Common water flea) 1 1

Pristionchus_pacificus_ 1 1

Schistosoma_mansoni_ 1 1

Acropora_digitifera_v1.0 1 1

Hydra_vulgaris 20 19

Amphimedon_queenslandica 5 5

Proterospongia_sp._ATCC_50818_ 2 2

Sphaeroforma_arctica_JP610_ 1 1

Capsaspora_owczarzaki_ATCC_30864_ 1 1

Mixia_osmundae_IAM_14324_v1.0 1 1

Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1 1

Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 1 1

Melampsora_laricis-populina_ 1 1

Rhodotorula_graminis_WP1_v1.0 1 1

Sporobolomyces_roseus_IAM_13481_ 2 2

Microbotryum_violaceum_22 1 1

Sphaerobolus_stellatus_v1.0 1 1

Serpula_lacrymans_var._lacrymans_S7.9_ 2 2

Coniophora_puteana 1 1

Hydnomerulius_pinastri_v2.0 1 1

Paxillus_rubicundulus_Ve08.2h10_v1.0 2 1

Pisolithus_microcarpus_441_v1.0 1 1

Pisolithus_tinctorius_Marx_270_v1.0 2 2

Scleroderma_citrinum_Foug_A_v1.0 2 2

Coprinopsis_cinerea_okayama7_130_v3 1 1

Pleurotus_ostreatus_ (Oyster mushroom) 1 1

Amanita_thiersii_Skay4041_v1.0 1 1

Amanita_muscaria_Koide_v1.0 (Fly agaric) 1 1

Galerina_marginata_v1.0 1 1

Hebeloma_cylindrosporum_h7_v2.0 1 1

Laccaria_bicolor_S238N-H82_ 1 1

Agaricus_bisporus_var._bisporus_ 1 1

Schizophyllum_commune_ 1 1

Stereum_hirsutum_FP-91666_SS1__v1.0 2 2

Heterobasidion_annosum_ 2 2

Gloeophyllum_trabeumv1.0 1 1

Punctularia_strigosozonata_v1.0 1 1

Sebacina_vermifera_MAFF_305830_v1.0 3 3

Fomitiporia_mediterranea_v1.0 1 1

Postia_placenta_ 1 1

Wolfiporia_cocos_MD-104_SS10__v1.0 2 1

Fomitopsis_pinicolav1.0 1 1

Fomitopsis_pinicola_FP-58527_SS1_v3.0 1 1

Phanerochaete_chrysosporium_RP-78_2.1 2 1

Dichomitus_squalens 2 1

Trametes_versicolor_v1.0 2 1

Daldinia_eschscholzii_EC12_v1.0 2 2

Apiospora_montagnei_NRRL_25634_v1.0 2 2

Magnaporthe_poae_ATCC_64411_22 1 1

Magnaporthe_grisea_70-15_ 2 2

Podospora_anserina_ 1 1

Sporotrichum_thermophile_ATCC_42464_ 1 1

Thielavia_terrestris_NRRL_8126_ 1 1

Chaetomium_globosum_CBS_148.51_ 1 1

Neurospora_tetrasperma_ 1 1

Neurospora_discreta_FGSC_8579_ 2 2

Neurospora_crassa_OR74A_ 1 1

Cryphonectria_parasitica_ (Chestnut blight fungus) 1 1

Verticillium_albo-atrum_VaMs.102_ 1 1

Verticillium_dahliae_VdLs.17_ 1 1

Acremonium_alcalophilumv_1.0 1 1

Glomerella_graminicola_22 1 1

Fusarium_graminearum_ 4 4

Nectria_haematococca_mpVI_ 2 2

Fusarium_oxysporum_f._sp._lycopersici_4286_ 4 4

Fusarium_verticillioides_7600_ 1 1

Trichoderma_asperellum_CBS_433.97_v1.0 1 1

Trichoderma_atroviride_ 1 1

Trichoderma_citrinoviride_v1.0 2 2

Trichoderma_reesei_1.2 1 1

Trichoderma_virens_Gv29-8_ 2 2

Trichoderma_longibrachiatum_ATCC_18648_v1.0 1 1

Trichoderma_harzianum_CBS_226.95_v1.0 3 3

Amorphotheca_resinae_v1.0 (Creosote fungus) 1 1

Sclerotinia_sclerotiorum_ 1 1

Blumeria_graminis_22 1 1

Didymella_exigua_CBS_183.55_v1.0 1 1

Leptosphaeria_maculans_22 1 1

Setosphaeria_turcica_v1.0 1 1

Cochliobolus_miyabeanus_ATCC_44560_v1.0 2 2

Cochliobolus_victoriae_FI3_v1.0 1 1

Cochliobolus_carbonum_26-R-13_v1.0 1 1

Cochliobolus_heterostrophus_ (Southern corn leaf blight pathogen) 1 1

Alternaria_brassicicola_ 1 1

Cochliobolus_lunatus_m118_v2.0 1 1

Pyrenophora_teres_f._teres_22 1 1

Pyrenophora_tritici-repentis_ 2 2

Stagonospora_nodorum_ 3 3

Mycosphaerella_graminicola_IPO323_ 1 1

Zasmidium_cellare_ATCC_36951_v1.0 1 1

Dothistroma_septosporum 2 2

Septoria_musiva_v1.0 1 1

Mycosphaerella_fijiensis_CIRAD86_ 1 1

Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 1 1

Paracoccidioides_brasiliensis_Pb18_ 1 1

Coccidioides_posadasii_RMSCC_3488_ 2 2

Coccidioides_immitis_RS_ 2 2

Ajellomyces_dermatitidis_SLH14081_ 1 1

Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1 1

Microsporum_canis_CBS_113480_ 4 3

Trichophyton_equinum_CBS_127.97_ 1 1

Trichophyton_verrucosum_HKI_0517_ 3 2

Arthroderma_benhamiae_CBS_112371_ 1 1

Trichophyton_tonsurans_CBS_112818_ 2 2

Trichophyton_rubrum_CBS_118892_ 3 3

Uncinocarpus_reesii_1704_ 2 2

Aspergillus_zonatus_v1.0 1 1

Penicillium_chrysogenum_Wisconsin_54-1255_ 1 1

Penicillium_chrysogenum_v1.0 1 1

Aspergillus_acidus_v1.0 2 2

Aspergillus_fumigatus_Af293 1 1

Aspergillus_brasiliensis_v1.0 1 1

Aspergillus_nidulans_FGSC_A4_ 2 2

Aspergillus_sydowii_v1.0 3 3

Aspergillus_versicolor_v1.0 4 4

Aspergillus_glaucus 1 1

Aspergillus_carbonarius_ITEM_5010_ 1 1

Neosartorya_fischeri_NRRL_181_ 1 1

Aspergillus_terreus_NIH2624_ 2 2

Aspergillus_tubingensis_v1.0 1 1

Aspergillus_wentii_v1.0 2 2

Aspergillus_oryzae_RIB40_ 2 2

Aspergillus_niger_22 1 1

Aspergillus_niger_ATCC_1015_ 1 1

Aspergillus_flavus_NRRL3357_ 2 2

Aspergillus_clavatus_NRRL_1_ 1 1

Penicillium_marneffei_ATCC_18224_ 1 1

Tuber_melanosporum_Mel28_22 1 1

Tuber_melanosporum_Vittad_ (Perigord truffle) 2 2

Saccharomyces_mikatae_MIT 1 1

Saccharomyces_paradoxus_MIT 1 1

Saccharomyces_cerevisiae_76 (Baker's yeast) 1 1

Saccharomyces_bayanus_MIT 1 1

Catenaria_anguillulae_PL171_v1.0 138 121

Allomyces_macrogynus_ATCC_38327_ 7 6

Dictyostelium_discoideum 5 5

Dictyostelium_purpureum_ 4 4

Eucalyptus_grandis_v201 (Rose gum) 1 1

Theobroma_cacao_B97-61/B2_v1 (Cacao) 2 2

Gossypium_raimondii_v221 2 2

Citrus_clementina_v165 2 2

Citrus_sinensis_v154 (Sweet orange) 2 2

Brassica_rapa_Chiifu-401_1.2 (Field mustard) 2 2

Capsella_rubella_v183 1 1

Arabidopsis_lyrata_ (Lyrate rockcress) 1 1

Arabidopsis_thaliana_10 (Thale cress) 2 2

Medicago_truncatula_ (Barrel medic) 3 3

Phaseolus_vulgaris_v186 (French bean) 1 1

Cucumis_sativus_v122 (Cucumber) 2 2

Malus_domestica_v196 (Apple) 6 6

Prunus_persica_v139 (Peach) 1 1

Linum_usitatissimum_v200 (Flax) 1 1

Manihot_esculenta_v147 (Cassava) 2 2

Populus_trichocarpa_v156 (Black cottonwood) 1 1

Vitis_vinifera_ (Wine grape) 4 4

Mimulus_guttatus_v140 (Spotted monkey flower) 1 1

Solanum_tuberosum_ (Potato) 1 1

Oryza_barthii_22 (African wild rice) 2 2

Oryza_glaberrima (African rice) 1 1

Oryza_nivara_22 2 2

Oryza_sativa_ssp._japonica_5.0 (Japanese rice) 1 1

Oryza_sativa_v193 (Rice) 1 1

Panicum_virgatum_v202 (Switchgrass) 3 3

Zea_mays_subsp._mays_ (Maize) 4 4

Zea_mays_v181 (Maize) 4 4

Amborella_trichopoda_22 1 1

Coccomyxa_subellipsoidea_sp._C-169_v2 3 2

Asterochloris_sp._Cgr/DA1pho_v1.0 19 15

Volvox_carteri_f._nagariensis_ 15 13

Volvox_carteri_v199 15 13

Chlamydomonas_reinhardtii_4.0 19 19

Ostreococcus_sp._RCC809_ 2 2

Ostreococcus_lucimarinus_CCE9901_ 12 11

Ostreococcus_tauri_ 1 1

Bathycoccus_prasinos_ 16 14

Micromonas_sp._RCC299_ 6 5

Micromonas_pusilla_CCMP1545_v3.0 28 27

Thecamonas_trahens_ATCC_50062_ 1 1

Bigelowiella_natans_CCMP2755_22 2 2

Giardia_lamblia_2.3 3 3

Ectocarpus_siliculosus 18 17

Aureococcus_anophagefferens_ 1 1

Pythium_iwayamai_DAOM_BR242034_22 34 32

Pythium_arrhenomanes_ATCC_12531_22 11 10

Pythium_ultimum_v1.7-2 29 28

Pythium_aphanidermatum_DAOM_BR444_22 5 5

Pythium_irregulare_DAOM_BR486_22 25 24

Pythium_vexans_DAOM_BR484_22 10 9

Phytophthora_ramorum_1.1 (Sudden oak death agent) 5 5

Phytophthora_sojae_1.1 17 17

Phytophthora_infestans_T30-4_ 9 9

Phytophthora_capsici_ 18 16

Hyaloperonospora_arabidopsidis_22 5 5

Thalassiosira_pseudonana_CCMP1335 1 1

Perkinsus_marinus_ATCC_50983_ 1 1

Symbiodinium_minutum_clade_B1_v1.2 2 2

Naegleria_gruberi_ 5 5

Trichomonas_vaginalis_ 230 230

Emiliania_huxleyi_CCMP1516_ 10 7

'Nostoc_azollae'_0708 1 1

Capnocytophaga_canimorsus_Cc5 1 1

Parachlamydia_acanthamoebae_UV-7 1 1

Babela_massiliensis 1 1

Rickettsia_bellii_OSU_85-389 3 3

Rickettsia_canadensis_str._McKiel 1 1

Rickettsia_typhi_str._Wilmington 1 1

Rickettsia_philipii_str._364D 1 1

Rickettsia_felis_URRWXCal2 1 1

Rickettsia_rhipicephali_str._3-7-female6-CWPP 1 1

Rickettsia_akari_str._Hartford 1 1

Rickettsia_rickettsii_str._'Sheila_Smith' 2 1

Legionella_longbeachae_NSW150 3 3

Legionella_pneumophila_str._Corby 4 3

Pseudomonas_aeruginosa_UCBPP-PA14 1 1

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Longest transcript per gene
Genome Number Proteins

Homo_sapiens_69_37 (Human) 2 2

Pan_troglodytes_69_2.1.4 (Chimpanzee) 1 1

Gorilla_gorilla_69_3.1 (Western gorilla) 1 1

Pongo_abelii_69_2 (Sumatran orangutan) 1 1

Nomascus_leucogenys_69_1.0 (Northern white-cheeked gibbon) 2 2

Macaca_mulatta_69_1 (Rhesus monkey) 3 3

Callithrix_jacchus_69_3.2.1 (White-tufted-ear marmoset) 2 2

Otolemur_garnettii_69_3 (Small-eared galago) 2 2

Microcebus_murinus_69_1 (Gray mouse lemur) 1 1

Rattus_norvegicus_69_3.4 (Norway rat) 2 2

Mus_musculus_69_38 (House mouse) 2 2

Ictidomys_tridecemlineatus_69_2 (Thirteen-lined ground squirrel) 1 1

Cavia_porcellus_69_3 (Domestic guinea pig) 1 1

Oryctolagus_cuniculus_69_2 (Rabbit) 1 1

Ochotona_princeps_69 (American pika) 2 2

Tupaia_belangeri_69 (Northern tree shrew) 2 2

Bos_taurus_69_3.1 (Cattle) 2 2

Tursiops_truncatus_69_1 (Bottlenose dolphin) 2 2

Mustela_putorius_furo_69_1.0 (Domestic ferret) 2 2

Ailuropoda_melanoleuca_69_1 (Giant panda) 2 2

Canis_familiaris_69_3.1 (Dog) 2 2

Felis_catus_69 (Domestic cat) 1 1

Equus_caballus_69_2 (Horse) 2 2

Myotis_lucifugus_69_2.0 (Little brown bat) 2 2

Procavia_capensis_69_1 (Cape rock hyrax) 2 2

Loxodonta_africana_69_3 (African savanna elephant) 1 1

Choloepus_hoffmanni_69_1 (Hoffmann's two-fingered sloth) 3 3

Sarcophilus_harrisii_69_7.0 (Tasmanian devil) 1 1

Ornithorhynchus_anatinus_69_5 (Platypus) 1 1

Pelodiscus_sinensis_69_1.0 (Chinese soft-shelled turtle) 1 1

Latimeria_chalumnae_69_1 (Coelacanth) 1 1

Tetraodon_nigroviridis_69_8 (Spotted green pufferfish) 1 1

Takifugu_rubripes_69_4 (Torafugu) 1 1

Gasterosteus_aculeatus_69_1 (Three-spined stickleback) 1 1

Oryzias_latipes_69_1 (Japanese medaka) 1 1

Xiphophorus_maculatus_69_4.4.2 (Southern platyfish) 1 1

Saccharomyces_cerevisiae_69_4 (Baker's yeast) 1 1

Arabidopsis_thaliana_10 (Thale cress) 2 2

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Others
Genome Number Proteins

Homo_sapiens_75_37_(old_version_GRC) (Human) 3 3

Homo_sapiens__(NCBI_version) (Human) 3 3

Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate) (House mouse) 2 2

Wuchereria_bancrofti_v1.0_(Request) (Agent of lymphatic filariasis) 1 1

Lotus_japonicus__(Early_assembly) 1 1

Malus_x_domestica_(Duplicate) (Apple) 6 6

PDB_chains_(SCOP_1.75)_(PDB) 1 1

STRING_v9.0.5_(STRING) 391 386

Protozoadb_2010_08_(Protozoadb) 462 462

Uniprot_2018_03_genome 3691 3479

NCBI_2017_08_genome 5481 5299

TargetDB__(Targets) 7 7

UniProt__viral_sequences_(Viral) 22 21

Protein_Data_Bank_(all_PDB_sequenc) 30 30

SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 5 5

NCBI_viral_sequences_(Viral) 152 138

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Domain combinations for Pseudo ankyrin repeat-like superfamily in groups of genomes