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Domain combinations for GUN4-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a GUN4-like domain in that genome.

Complete genomes
Genome Number Proteins

Selaginella_moellendorffii_ 1 1

Pinus_taeda (Loblolly pine) 2 2

Picea_abies (Norway spruce) 1 1

Eucalyptus_grandis_v201 (Rose gum) 1 1

Theobroma_cacao_B97-61/B2_v1 (Cacao) 1 1

Gossypium_raimondii_v221 2 2

Citrus_clementina_v165 1 1

Citrus_sinensis_v154 (Sweet orange) 1 1

Thellungiella_halophila_v173 1 1

Brassica_rapa_Chiifu-401_1.2 (Field mustard) 2 2

Capsella_rubella_v183 1 1

Arabidopsis_lyrata_ (Lyrate rockcress) 1 1

Arabidopsis_thaliana_10 (Thale cress) 1 1

Carica_papaya_ (Papaya) 1 1

Medicago_truncatula_ (Barrel medic) 1 1

Phaseolus_vulgaris_v186 (French bean) 1 1

Glycine_max_v109 (Soybean) 2 2

Cucumis_sativus_v122 (Cucumber) 1 1

Fragaria_vesca_ (Wild strawberry) 1 1

Malus_domestica_v196 (Apple) 1 1

Prunus_persica_v139 (Peach) 1 1

Linum_usitatissimum_v200 (Flax) 2 2

Manihot_esculenta_v147 (Cassava) 1 1

Populus_trichocarpa_v156 (Black cottonwood) 3 3

Vitis_vinifera_ (Wine grape) 1 1

Solanum_lycopersicum_v.2.3 (Tomato) 1 1

Solanum_tuberosum_ (Potato) 1 1

Actinidia_chinensis_Hongyang_ 1 1

Aquilegia_coerulea_v195 1 1

Triticum_urartu_22 1 1

Triticum_aestivum_22 (Bread wheat) 3 3

Aegilops_tauschii_22 1 1

Brachypodium_distachyon_ (Stiff brome) 1 1

Oryza_barthii_22 (African wild rice) 1 1

Oryza_meridionalis_22 1 1

Oryza_glumaepatula_22 1 1

Oryza_glaberrima (African rice) 1 1

Oryza_punctata_22 1 1

Oryza_nivara_22 1 1

Oryza_brachyantha_22 (Malo sina) 1 1

Oryza_sativa_ssp._japonica_5.0 (Japanese rice) 1 1

Oryza_sativa_v193 (Rice) 1 1

Phyllostachys_heterocyclavar._pubescens (Kikko-chiku) 2 2

Panicum_virgatum_v202 (Switchgrass) 2 2

Setaria_italica_v164 (Foxtail millet) 1 1

Zea_mays_subsp._mays_ (Maize) 1 1

Zea_mays_v181 (Maize) 1 1

Sorghum_bicolor_ (Sorghum) 1 1

Musa_balbisiana (Balbis banana) 2 2

Musa_acuminata_22 (Wild Malaysian banana) 2 2

Amborella_trichopoda_22 1 1

Physcomitrella_patens 2 2

Coccomyxa_subellipsoidea_sp._C-169_v2 1 1

Asterochloris_sp._Cgr/DA1pho_v1.0 1 1

Chlorella_variabilis_sp._NC64A_ 1 1

Chlorella_vulgaris_ 1 1

Volvox_carteri_f._nagariensis_ 1 1

Volvox_carteri_v199 1 1

Chlamydomonas_reinhardtii_4.0 1 1

Ostreococcus_sp._RCC809_ 1 1

Ostreococcus_lucimarinus_CCE9901_ 1 1

Ostreococcus_tauri_ 1 1

Bathycoccus_prasinos_ 1 1

Micromonas_sp._RCC299_ 1 1

Micromonas_pusilla_CCMP1545_v3.0 1 1

Cyanidioschyzon_merolae_strain_10D_22 1 1

Cyanidioschyzon_merolae 1 1

Bigelowiella_natans_CCMP2755_22 1 1

Cyanophora_paradoxa_ 1 1

Ectocarpus_siliculosus 2 2

Aureococcus_anophagefferens_ 2 2

Phaeodactylum_tricornutumCCAP_1055/1 1 1

Fragilariopsis_cylindrus 2 2

Thalassiosira_pseudonana_CCMP1335 1 1

Symbiodinium_minutum_clade_B1_v1.2 2 2

Guillardia_theta_CCMP2712_v1.0_ 1 1

Emiliania_huxleyi_CCMP1516_ 2 2

Leptolyngbya_sp._PCC_7376 7 7

Pseudanabaena_sp._PCC_7367 9 9

Acaryochloris_marina_MBIC11017 6 6

Synechocystis_sp._PCC_6803 3 3

Thermosynechococcus_sp._NK55 1 1

Thermosynechococcus_elongatus_BP-1 1 1

Synechococcus_sp._PCC_7502 3 3

Synechococcus_sp._PCC_6312 1 1

Synechococcus_sp._CC9311 1 1

Synechococcus_elongatus_PCC_7942 1 1

Prochlorococcus_marinus_str._MIT_9515 1 1

Microcoleus_sp._PCC_7113 12 12

Trichodesmium_erythraeum_IMS101 11 11

Geitlerinema_sp._PCC_7407 3 3

Cyanothece_sp._PCC_8802 9 9

Gloeocapsa_sp._PCC_7428 1 1

cyanobacterium_UCYN-A 1 1

Halothece_sp._PCC_7418 1 1

Microcystis_aeruginosa_NIES-843 8 8

Gloeobacter_violaceus_PCC_7421 1 1

Rivularia_sp._PCC_7116 7 7

Calothrix_sp._PCC_7507 6 6

Anabaena_variabilis_ATCC_29413 3 3

'Nostoc_azollae'_0708 1 1

Nostoc_sp._PCC_7107 2 2

Nostoc_punctiforme_PCC_73102 9 9

Nostoc_sp._PCC_7120 4 4

Nostoc_sp._PCC_7524 6 6

Anabaena_sp._90 9 9

Frankia_sp._EAN1pec 1 1

Streptomyces_avermitilis_MA-4680 1 1

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Longest transcript per gene
Genome Number Proteins

Arabidopsis_thaliana_10 (Thale cress) 1 1

Others
Genome Number Proteins

Picea_sitchensis__(Incomplete) (Sitka spruce) 1 1

Lotus_japonicus__(Early_assembly) 1 1

Malus_x_domestica_(Duplicate) (Apple) 1 1

Ricinus_communis__(Early_assembly) (Castor bean) 1 1

Nicotiana_benthamiana_0.4.4_(Early_draft) 1 1

Solanum_pimpinellifolium_A-1.0_(Early_draft) (Currant tomato) 1 1

Solanum_lycopersicum_v2.3_(Early_assembly) (Tomato) 1 1

Phoenix_dactylifera__(Early_draft) (Date palm) 1 1

NCBI_plasmid_sequences_(Plasmids) 16 15

SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 16 16

STRING_v9.0.5_(STRING) 128 127

NCBI_2017_08_genome 2094 2055

Uniprot_2018_03_genome 2176 2142

PDB_chains_(SCOP_1.75)_(PDB) 3 3

TargetDB__(Targets) 2 2

Protein_Data_Bank_(all_PDB_sequenc) 11 11

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Domain combinations for GUN4-like superfamily in groups of genomes