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Domain combinations for Pentapeptide repeat-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Pentapeptide repeat-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   16 16
Pan_troglodytes_76_2.1.4   (Chimpanzee)   7 7
Gorilla_gorilla_76_3.1   (Western gorilla)   10 10
Pongo_abelii_76_2   (Sumatran orangutan)   9 9
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   9 9
Papio_anubis_76   (Olive baboon)   5 5
Macaca_mulatta_76_1   (Rhesus monkey)   14 11
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   9 9
Otolemur_garnettii_76_3   (Small-eared galago)   5 5
Microcebus_murinus_76_1   (Gray mouse lemur)   4 4
Rattus_norvegicus_76_5.0   (Norway rat)   8 8
Mus_musculus_76_38   (House mouse)   12 12
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   5 5
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   5 5
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   7 7
Cavia_porcellus_76_3   (Domestic guinea pig)   5 5
Oryctolagus_cuniculus_76_2   (Rabbit)   5 5
Ochotona_princeps_76   (American pika)   5 5
Tupaia_belangeri_76   (Northern tree shrew)   3 3
Sus_scrofa_76_10.2   (Pig)   4 4
Bos_taurus_76_3.1   (Cattle)   6 6
Ovis_aries_76_3.1   (Sheep)   6 6
Vicugna_pacos_76_1   (Alpaca)   4 4
Tursiops_truncatus_76_1   (Bottlenose dolphin)   6 6
Mustela_putorius_furo_76_1.0   (Domestic ferret)   6 5
Ailuropoda_melanoleuca_76_1   (Giant panda)   6 6
Canis_familiaris_76_3.1   (Dog)   7 7
Felis_catus_76_6.2   (Domestic cat)   10 8
Equus_caballus_76_2   (Horse)   6 6
Myotis_lucifugus_76_2.0   (Little brown bat)   6 6
Pteropus_vampyrus_76_1   (Large flying fox)   5 5
Sorex_araneus_76_1   (European shrew)   4 4
Erinaceus_europaeus_76   (Western European hedgehog)   3 3
Procavia_capensis_76_1   (Cape rock hyrax)   3 3
Loxodonta_africana_76_3   (African savanna elephant)   5 5
Echinops_telfairi_76   (Small Madagascar hedgehog)   4 4
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   9 9
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   2 2
Macropus_eugenii_76_1.0   (Tammar wallaby)   4 4
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   7 7
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   9 9
Ornithorhynchus_anatinus_76_5   (Platypus)   4 4
Saccoglossus_kowalevskii_v3.0 97 70
Petromyzon_marinus_76_7.0   (Sea lamprey)   7 6
Meleagris_gallopavo_76_2   (Turkey)   7 7
Gallus_gallus_76_4   (Chicken)   9 6
Anas_platyrhynchos_76_1.0   (Mallard)   5 5
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   4 4
Ficedula_albicollis_76_1.0   (Collared flycatcher)   5 5
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   10 7
Anolis_carolinensis_76_2.0   (Green anole)   3 3
Xenopus_laevis_   (African clawed frog)   2 2
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   5 5
Latimeria_chalumnae_76_1   (Coelacanth)   8 7
Lepisosteus_oculatus_76   (Spotted gar)   7 7
Gadus_morhua_76_1   (Atlantic cod)   8 8
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   11 11
Takifugu_rubripes_76_4   (Torafugu)   9 9
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   8 8
Oryzias_latipes_76_1   (Japanese medaka)   10 10
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   10 8
Poecilia_formosa_76   (Amazon molly)   7 7
Oreochromis_niloticus_76_1.0   (Nile tilapia)   9 9
Astyanax_mexicanus_76   (Mexican tetra)   6 6
Danio_rerio_76_9   (Zebrafish)   13 13
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   5 5
Ciona_intestinalis_76   (Vase tunicate)   3 3
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   13 10
Adineta_vaga 14 13
Octopus_bimaculoides_280 12 9
Crassostrea_gigas_22   (Pacific oyster)   1 1
Lottia_gigantea_   (Owl limpet)   53 41
Helobdella_robusta_ 10 8
Capitella_sp._I_ 19 17
Danaus_plexippus_OGS1.0   (Monarch butterfly)   2 2
Heliconius_melpomene_   (Postman butterfly)   2 2
Bombyx_mori_   (Domestic silkworm)   2 2
Nasonia_vitripennis_   (Jewel wasp)   2 2
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   2 2
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   5 5
Linepithema_humile_v1.1   (Argentine ant)   2 2
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   3 3
Solenopsis_invicta_v.2.2.3   (Red fire ant)   2 2
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   2 2
Atta_cephalotes_v1.1 2 2
Camponotus_floridanus_v3.3   (Florida carpenter ant)   6 6
Lucilia_cuprina   (Australian sheep blowfly)   3 3
Drosophila_grimshawi_1.3 1 1
Drosophila_willistoni_1.3 1 1
Drosophila_pseudoobscura_2.13 2 2
Drosophila_persimilis_1.3 2 2
Drosophila_suzukii 1 1
Drosophila_yakuba_1.3 1 1
Drosophila_simulans_1.3 2 2
Drosophila_sechellia_1.3 3 3
Drosophila_melanogaster_76_5   (Fruit fly)   2 2
Drosophila_erecta_1.3 1 1
Drosophila_ananassae_1.3 1 1
Drosophila_virilis_1.2 1 1
Drosophila_mojavensis_1.3 2 2
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   2 2
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   4 4
Anopheles_gambiae_49_3j   (African malaria mosquito)   1 1
Tribolium_castaneum_3.0   (Red flour beetle)   2 2
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   2 2
Rhodnius_prolixus_22 3 3
Daphnia_pulex_   (Common water flea)   13 13
Strigamia_maritima_22 6 6
Sarcoptes_scabiei 2 2
Tetranychus_urticae_   (Two-spotted spider mite)   1 1
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   12 10
Meloidogyne_incognita_   (Southern root-knot nematode)   2 2
Onchocerca_volvulus_22 4 4
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   1 1
Caenorhabditis_japonica_ 18 14
Caenorhabditis_remanei_ 2 2
Caenorhabditis_briggsae_2 4 3
Mnemiopsis_leidyi   (Sea walnut)   4 4
Thelohanellus_kitauei 1 1
Acropora_digitifera_v1.0 1 1
Nematostella_vectensis_1.0   (Starlet sea anemone)   77 60
Hydra_vulgaris 9 8
Amphimedon_queenslandica 8 5
Proterospongia_sp._ATCC_50818_ 17 6
Monosiga_brevicollis_ 7 6
Sphaeroforma_arctica_JP610_ 5 5
Capsaspora_owczarzaki_ATCC_30864_ 2 2
Mortierella_verticillata_NRRL_6337_ 2 2
Phycomyces_blakesleeanus_ 1 1
Rhizopus_oryzae_RA_99-880_ 1 1
Melampsora_laricis-populina_ 1 1
Rhodotorula_graminis_WP1_v1.0 1 1
Microbotryum_violaceum_22 1 1
Piloderma_croceum_F_1598_v1.0 1 1
Amanita_muscaria_Koide_v1.0   (Fly agaric)   1 1
Heterobasidion_annosum_ 1 1
Postia_placenta_ 2 2
Wolfiporia_cocos_MD-104_SS10__v1.0 1 1
Apiospora_montagnei_NRRL_25634_v1.0 1 1
Neurospora_tetrasperma_ 1 1
Neurospora_discreta_FGSC_8579_ 1 1
Trichoderma_asperellum_CBS_433.97_v1.0 1 1
Trichoderma_harzianum_CBS_226.95_v1.0 1 1
Amorphotheca_resinae_v1.0   (Creosote fungus)   1 1
Didymella_exigua_CBS_183.55_v1.0 1 1
Cochliobolus_victoriae_FI3_v1.0 2 2
Mycosphaerella_graminicola_IPO323_ 1 1
Zasmidium_cellare_ATCC_36951_v1.0 2 2
Dothistroma_septosporum 2 2
Septoria_musiva_v1.0 3 2
Mycosphaerella_fijiensis_CIRAD86_ 15 15
Coccidioides_posadasii_RMSCC_3488_ 1 1
Coccidioides_immitis_RS_ 2 2
Ajellomyces_dermatitidis_SLH14081_ 1 1
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1 1
Uncinocarpus_reesii_1704_ 1 1
Aspergillus_zonatus_v1.0 1 1
Aspergillus_acidus_v1.0 1 1
Aspergillus_fumigatus_Af293 1 1
Aspergillus_brasiliensis_v1.0 1 1
Aspergillus_nidulans_FGSC_A4_ 1 1
Aspergillus_sydowii_v1.0 1 1
Aspergillus_versicolor_v1.0 1 1
Aspergillus_carbonarius_ITEM_5010_ 1 1
Neosartorya_fischeri_NRRL_181_ 1 1
Aspergillus_tubingensis_v1.0 1 1
Aspergillus_oryzae_RIB40_ 1 1
Aspergillus_niger_22 1 1
Aspergillus_niger_ATCC_1015_ 1 1
Aspergillus_flavus_NRRL3357_ 1 1
Aspergillus_clavatus_NRRL_1_ 1 1
Dekkera_bruxellensis_CBS_2499_v2.0 1 1
Lodderomyces_elongisporus_NRRL_YB-4239_ 1 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1 1
Catenaria_anguillulae_PL171_v1.0 1 1
Allomyces_macrogynus_ATCC_38327_ 2 2
Dictyostelium_discoideum 5 5
Dictyostelium_purpureum_ 7 7
Entamoeba_invadens_1.2 16 12
Selaginella_moellendorffii_ 9 9
Pinus_taeda   (Loblolly pine)   3 3
Picea_abies   (Norway spruce)   10 7
Eucalyptus_grandis_v201   (Rose gum)   14 14
Theobroma_cacao_B97-61/B2_v1   (Cacao)   4 4
Gossypium_raimondii_v221 23 23
Citrus_clementina_v165 10 9
Citrus_sinensis_v154   (Sweet orange)   13 13
Thellungiella_halophila_v173 6 6
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   4 4
Capsella_rubella_v183 4 4
Arabidopsis_lyrata_   (Lyrate rockcress)   4 4
Arabidopsis_thaliana_10   (Thale cress)   9 9
Carica_papaya_   (Papaya)   3 3
Medicago_truncatula_   (Barrel medic)   5 5
Phaseolus_vulgaris_v186   (French bean)   4 4
Glycine_max_v109   (Soybean)   13 13
Cucumis_sativus_v122   (Cucumber)   5 5
Fragaria_vesca_   (Wild strawberry)   14 12
Malus_domestica_v196   (Apple)   25 24
Prunus_persica_v139   (Peach)   5 5
Linum_usitatissimum_v200   (Flax)   7 7
Manihot_esculenta_v147   (Cassava)   4 4
Populus_trichocarpa_v156   (Black cottonwood)   9 9
Vitis_vinifera_   (Wine grape)   5 5
Mimulus_guttatus_v140   (Spotted monkey flower)   4 4
Solanum_lycopersicum_v.2.3   (Tomato)   4 4
Solanum_tuberosum_   (Potato)   9 8
Actinidia_chinensis_Hongyang_ 4 4
Aquilegia_coerulea_v195 16 16
Triticum_urartu_22 4 3
Triticum_aestivum_22   (Bread wheat)   12 12
Aegilops_tauschii_22 4 4
Brachypodium_distachyon_   (Stiff brome)   5 5
Oryza_barthii_22   (African wild rice)   8 8
Oryza_meridionalis_22 5 5
Oryza_glumaepatula_22 9 9
Oryza_glaberrima   (African rice)   3 3
Oryza_punctata_22 5 5
Oryza_nivara_22 5 5
Oryza_brachyantha_22   (Malo sina)   6 5
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   6 6
Oryza_sativa_v193   (Rice)   6 6
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   8 8
Panicum_virgatum_v202   (Switchgrass)   7 7
Setaria_italica_v164   (Foxtail millet)   5 5
Zea_mays_subsp._mays_   (Maize)   9 9
Zea_mays_v181   (Maize)   9 9
Sorghum_bicolor_   (Sorghum)   4 4
Musa_balbisiana   (Balbis banana)   5 4
Musa_acuminata_22   (Wild Malaysian banana)   4 4
Amborella_trichopoda_22 4 4
Physcomitrella_patens 12 12
Coccomyxa_subellipsoidea_sp._C-169_v2 2 2
Asterochloris_sp._Cgr/DA1pho_v1.0 3 3
Chlorella_variabilis_sp._NC64A_ 4 4
Chlorella_vulgaris_ 3 3
Volvox_carteri_f._nagariensis_ 7 7
Volvox_carteri_v199 8 8
Chlamydomonas_reinhardtii_4.0 4 4
Ostreococcus_sp._RCC809_ 6 6
Ostreococcus_lucimarinus_CCE9901_ 5 5
Ostreococcus_tauri_ 6 6
Bathycoccus_prasinos_ 6 6
Micromonas_sp._RCC299_ 13 9
Micromonas_pusilla_CCMP1545_v3.0 12 11
Cyanidioschyzon_merolae_strain_10D_22 4 4
Cyanidioschyzon_merolae 4 4
Porphyridium_purpureum_02_2012 18 12
Thecamonas_trahens_ATCC_50062_ 3 3
Bigelowiella_natans_CCMP2755_22 4 4
Cyanophora_paradoxa_ 27 27
Leishmania_mexicana_2.4 2 2
Leishmania_major_strain_Friedlin_ 2 2
Leishmania_infantum_JPCM5_2.4 2 2
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 2 2
Trypanosoma_vivax_ 2 2
Trypanosoma_cruzi_strain_CL_Brener 3 3
Trypanosoma_congolense_2.4 1 1
Trypanosoma_brucei_gambiense_v4.1 3 3
Trypanosoma_brucei_TREU927_v4.1 3 3
Ectocarpus_siliculosus 5 5
Aureococcus_anophagefferens_ 2 2
Phytophthora_ramorum_1.1   (Sudden oak death agent)   1 1
Phytophthora_sojae_1.1 1 1
Phytophthora_capsici_ 1 1
Phaeodactylum_tricornutumCCAP_1055/1 3 3
Fragilariopsis_cylindrus 5 5
Thalassiosira_pseudonana_CCMP1335 3 3
Paramecium_tetraurelia_ 79 79
Tetrahymena_thermophila_SB210_1_ 4 2
Ichthyophthirius_multifiliis_strain_G5_ 1 1
Neospora_caninum 3 1
Toxoplasma_gondii_VEG 1 1
Toxoplasma_gondii_ME49 1 1
Theileria_annulata 1 1
Plasmodium_falciparum_3D7_ 13 13
Plasmodium_vivax_SaI-1_7.0 8 8
Plasmodium_knowlesi_strain_H_ 6 6
Plasmodium_yoelii_ssp._yoelii_1_ 9 9
Plasmodium_chabaudi_ 3 3
Plasmodium_berghei_ANKA_ 6 5
Symbiodinium_minutum_clade_B1_v1.2 11 9
Naegleria_gruberi_ 24 16
Trichomonas_vaginalis_ 5 5
Guillardia_theta_CCMP2712_v1.0_ 23 9
Emiliania_huxleyi_CCMP1516_ 137 101
Leptolyngbya_sp._PCC_7376 30 20
Pseudanabaena_sp._PCC_7367 85 58
Acaryochloris_marina_MBIC11017 111 85
Synechocystis_sp._PCC_6803 22 17
Thermosynechococcus_sp._NK55 20 15
Thermosynechococcus_elongatus_BP-1 21 15
Synechococcus_sp._PCC_7502 33 21
Synechococcus_sp._PCC_6312 25 19
Synechococcus_sp._CC9311 6 6
Synechococcus_elongatus_PCC_7942 10 10
Prochlorococcus_marinus_str._MIT_9515 4 4
Microcoleus_sp._PCC_7113 109 77
Trichodesmium_erythraeum_IMS101 39 30
Geitlerinema_sp._PCC_7407 48 37
Cyanothece_sp._PCC_8802 38 30
Gloeocapsa_sp._PCC_7428 42 33
cyanobacterium_UCYN-A 2 2
Halothece_sp._PCC_7418 18 13
Microcystis_aeruginosa_NIES-843 21 18
Gloeobacter_violaceus_PCC_7421 31 23
Rivularia_sp._PCC_7116 78 57
Calothrix_sp._PCC_7507 38 32
Anabaena_variabilis_ATCC_29413 39 34
'Nostoc_azollae'_0708 21 18
Nostoc_sp._PCC_7107 38 32
Nostoc_punctiforme_PCC_73102 56 43
Nostoc_sp._PCC_7120 45 36
Nostoc_sp._PCC_7524 30 24
Anabaena_sp._90 30 25
Mycoplasma_leachii_99/014/6 2 2
Mycoplasma_mycoides_subsp._capri_LC_str._95010 1 1
Mycoplasma_bovis_HB0801 1 1
Mycoplasma_pulmonis_UAB_CTIP 1 1
Conexibacter_woesei_DSM_14684 1 1
Eggerthella_sp._YY7918 2 2
Eggerthella_lenta_DSM_2243 2 2
Ilumatobacter_coccineus 1 1
Acidimicrobium_ferrooxidans_DSM_10331 1 1
Thermobispora_bispora_DSM_43833 1 1
Nakamurella_multipartita_DSM_44233 4 4
Acidothermus_cellulolyticus_11B 2 2
Modestobacter_marinus 4 4
Blastococcus_saxobsidens_DD2 2 2
Geodermatophilus_obscurus_DSM_43160 4 4
Kineococcus_radiotolerans_SRS30216 2 2
Catenulispora_acidiphila_DSM_44928 4 4
Stackebrandtia_nassauensis_DSM_44728 7 7
Frankia_symbiont_of_Datisca_glomerata 7 7
Frankia_sp._EAN1pec 13 12
Frankia_alni_ACN14a 6 5
Thermobifida_fusca_YX 1 1
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 2 2
Thermomonospora_curvata_DSM_43183 1 1
Streptosporangium_roseum_DSM_43021 8 7
Kitasatospora_setae_KM-6054 6 6
Streptomyces_coelicolor_A3(2) 2 2
Streptomyces_sp._PAMC26508 2 2
Streptomyces_flavogriseus_ATCC_33331 2 2
Streptomyces_sp._SirexAA-E 2 2
Streptomyces_griseus_subsp._griseus_NBRC_13350 2 2
Streptomyces_bingchenggensis_BCW-1 5 5
Streptomyces_violaceusniger_Tu_4113 5 5
Streptomyces_avermitilis_MA-4680 4 4
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 3 3
Streptomyces_scabiei_87.22 3 3
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 4 4
Actinosynnema_mirum_DSM_43827 5 5
Saccharomonospora_viridis_DSM_43017 1 1
Pseudonocardia_dioxanivorans_CB1190 4 4
Saccharopolyspora_erythraea_NRRL_2338 5 5
Amycolatopsis_mediterranei_U32 6 6
Kribbella_flavida_DSM_17836 6 6
Nocardioides_sp._JS614 4 4
Propionibacterium_propionicum_F0230a 1 1
Microlunatus_phosphovorus_NM-1 5 4
Propionibacterium_freudenreichii_subsp._shermanii_CIRM-BIA1 1 1
Salinispora_arenicola_CNS-205 7 7
Salinispora_tropica_CNB-440 5 5
Verrucosispora_maris_AB-18-032 3 3
Micromonospora_sp._L5 4 4
Micromonospora_aurantiaca_ATCC_27029 7 7
Actinoplanes_sp._N902-109 6 6
Actinoplanes_sp._SE50/110 4 4
Actinoplanes_missouriensis_431 5 5
Segniliparus_rotundus_DSM_44985 1 1
Tsukamurella_paurometabola_DSM_20162 1 1
Gordonia_polyisoprenivorans_VH2 3 2
Rhodococcus_jostii_RHA1 6 6
Rhodococcus_equi_103S 5 5
Rhodococcus_opacus_B4 2 2
Rhodococcus_erythropolis_PR4 5 4
Nocardia_cyriacigeorgica_GUH-2 2 2
Amycolicicoccus_subflavus_DQS3-9A1 1 1
Mycobacterium_abscessus_ATCC_19977 1 1
Mycobacterium_sp._JLS 1 1
Mycobacterium_intracellulare_ATCC_13950 1 1
Mycobacterium_avium_104 1 1
Mycobacterium_vanbaalenii_PYR-1 2 2
Mycobacterium_canettii_CIPT_140010059 1 1
Mycobacterium_africanum_GM041182 1 1
Mycobacterium_tuberculosis_KZN_1435 1 1
Mycobacterium_tuberculosis 1 1
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 1 1
Mycobacterium_rhodesiae_NBB3 1 1
Mycobacterium_ulcerans_Agy99 1 1
Mycobacterium_gilvum_PYR-GCK 1 1
Mycobacterium_chubuense_NBB4 1 1
Mycobacterium_marinum_M 1 1
Mycobacterium_smegmatis_str._MC2_155 2 2
Corynebacterium_variabile_DSM_44702 1 1
Corynebacterium_glutamicum_R 1 1
Sanguibacter_keddieii_DSM_10542 3 3
Kytococcus_sedentarius_DSM_20547 1 1
Beutenbergia_cavernae_DSM_12333 5 5
Microbacterium_testaceum_StLB037 1 1
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 1 1
Jonesia_denitrificans_DSM_20603 1 1
Intrasporangium_calvum_DSM_43043 3 3
Brachybacterium_faecium_DSM_4810 1 1
Isoptericola_variabilis_225 2 2
Xylanimonas_cellulosilytica_DSM_15894 2 2
Cellulomonas_flavigena_DSM_20109 3 3
Cellulomonas_fimi_ATCC_484 3 3
[Cellvibrio]_gilvus_ATCC_13127 3 3
Arthrobacter_phenanthrenivorans_Sphe3 1 1
Arthrobacter_chlorophenolicus_A6 3 3
Arthrobacter_aurescens_TC1 2 2
Kocuria_rhizophila_DC2201 1 1
Rothia_mucilaginosa_DY-18 1 1
Rothia_dentocariosa_ATCC_17931 1 1
Arthrobacter_sp._Rue61a 2 2
Arthrobacter_sp._FB24 1 1
Bifidobacterium_animalis_subsp._lactis_Bl-04 1 1
Bifidobacterium_dentium_Bd1 1 1
Actinomyces_sp._F0330 1 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 4 3
Anaerolinea_thermophila_UNI-1 1 1
Sphaerobacter_thermophilus_DSM_20745 1 1
Herpetosiphon_aurantiacus_DSM_785 4 4
Chloroflexus_sp._MS-G 2 1
Chloroflexus_sp._Y-400-fl 2 1
Chloroflexus_aggregans_DSM_9485 2 1
Chloroflexus_aurantiacus_J-10-fl 2 1
Deinococcus_gobiensis_I-0 1 1
Deinococcus_radiodurans_R1 1 1
Acidaminococcus_intestini_RyC-MR95 2 1
Acidaminococcus_fermentans_DSM_20731 2 1
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 2 2
Erysipelothrix_rhusiopathiae_str._Fujisawa 1 1
Natranaerobius_thermophilus_JW/NM-WN-LF 1 1
Clostridium_clariflavum_DSM_19732 3 3
Eubacterium_siraeum 2 2
Clostridium_cellulolyticum_H10 1 1
Faecalibacterium_prausnitzii 2 2
Ruminococcus_albus_7 2 2
Desulfosporosinus_acidiphilus_SJ4 3 3
Desulfosporosinus_orientis_DSM_765 2 2
Dehalobacter_sp._DCA 2 2
Dehalobacter_sp._CF 2 2
Syntrophobotulus_glycolicus_DSM_8271 1 1
Desulfitobacterium_hafniense_Y51 1 1
Desulfitobacterium_dehalogenans_ATCC_51507 1 1
Desulfotomaculum_acetoxidans_DSM_771 3 1
Desulfotomaculum_ruminis_DSM_2154 1 1
Acetobacterium_woodii_DSM_1030 3 3
Eubacterium_limosum_KIST612 2 2
Clostridium_difficile_630 3 3
Clostridium_sticklandii_DSM_519 1 1
Clostridium_saccharolyticum_WM1 2 2
Clostridium_phytofermentans_ISDg 1 1
Clostridium_lentocellum_DSM_5427 3 3
Alkaliphilus_oremlandii_OhILAs 2 2
Alkaliphilus_metalliredigens_QYMF 2 2
Clostridium_sp._BNL1100 2 2
Clostridium_ljungdahlii_DSM_13528 2 2
Clostridium_kluyveri_DSM_555 1 1
Clostridium_beijerinckii_NCIMB_8052 8 8
Clostridium_tetani_E88 1 1
Clostridium_perfringens_ATCC_13124 2 2
Clostridium_cellulovorans_743B 4 4
Clostridium_botulinum_A_str._ATCC_3502 3 3
Clostridium_acetobutylicum_ATCC_824 5 5
Carnobacterium_sp._17-4 1 1
Carnobacterium_sp._WN1359 1 1
Enterococcus_sp._7L76 1 1
Enterococcus_hirae_ATCC_9790 1 1
Enterococcus_faecium_Aus0004 2 2
Enterococcus_faecalis_62 1 1
Leuconostoc_gasicomitatum_LMG_18811 1 1
Lactobacillus_sakei_subsp._sakei_23K 1 1
Lactobacillus_plantarum_JDM1 1 1
Lactobacillus_buchneri_NRRL_B-30929 1 1
Lactobacillus_buchneri 1 1
Lactobacillus_brevis_ATCC_367 2 2
Pediococcus_pentosaceus_ATCC_25745 1 1
Lactococcus_garvieae_ATCC_49156 2 2
Lactococcus_lactis_subsp._cremoris_MG1363 1 1
Streptococcus_sp._I-P16 1 1
Streptococcus_infantarius_subsp._infantarius_CJ18 1 1
Exiguobacterium_sp._MH3 2 2
Exiguobacterium_sp._AT1b 2 2
Exiguobacterium_sibiricum_255-15 2 2
Brevibacillus_brevis_NBRC_100599 6 6
Paenibacillus_sp._JDR-2 9 7
Paenibacillus_terrae_HPL-003 5 5
Paenibacillus_mucilaginosus_3016 7 5
Paenibacillus_polymyxa_M1 6 6
Listeria_welshimeri_serovar_6b_str._SLCC5334 1 1
Listeria_innocua_Clip11262 1 1
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 1 1
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 1 1
Listeria_ivanovii_subsp._ivanovii_PAM_55 1 1
Lysinibacillus_sphaericus_C3-41 3 3
Oceanobacillus_iheyensis_HTE831 1 1
Bacillus_sp._JS 2 2
Bacillus_sp._1NLA3E 2 2
Bacillus_amyloliquefaciens_FZB42 2 2
Bacillus_atrophaeus_1942 2 2
Bacillus_subtilis_subsp._subtilis_str._168 2 2
Bacillus_halodurans_C-125 1 1
Bacillus_weihenstephanensis_KBAB4 3 3
Bacillus_thuringiensis_str._Al_Hakam 3 3
Bacillus_cereus_03BB102 4 4
Bacillus_anthracis_str._A0248 2 2
Bacillus_pseudofirmus_OF4 1 1
Bacillus_clausii_KSM-K16 2 2
Bacillus_cellulosilyticus_DSM_2522 1 1
Bacillus_pumilus_SAFR-032 1 1
Bacillus_megaterium_DSM_319 1 1
Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305 1 1
Staphylococcus_lugdunensis_HKU09-01 1 1
Staphylococcus_haemolyticus_JCSC1435 1 1
Staphylococcus_epidermidis_RP62A 1 1
Gemmatimonas_aurantiaca_T-27 2 2
Pelodictyon_phaeoclathratiforme_BU-1 9 7
Chlorobium_luteolum_DSM_273 5 3
Chlorobium_chlorochromatii_CaD3 4 3
Chlorobium_phaeobacteroides_DSM_266 9 7
Chlorobium_phaeovibrioides_DSM_265 4 2
Chlorobium_limicola_DSM_245 6 4
Chlorobaculum_parvum_NCIB_8327 6 4
Chlorobium_tepidum_TLS 7 4
Chloroherpeton_thalassium_ATCC_35110 1 1
Prosthecochloris_aestuarii_DSM_271 5 3
Haliscomenobacter_hydrossis_DSM_1100 3 3
Saprospira_grandis_str._Lewin 2 2
Niastella_koreensis_GR20-10 2 2
Salinibacter_ruber_M8 1 1
Flexibacter_litoralis_DSM_6794 1 1
Belliella_baltica_DSM_15883 1 1
Cyclobacterium_marinum_DSM_745 1 1
Marivirga_tractuosa_DSM_4126 2 2
Fibrella_aestuarina 5 3
Leadbetterella_byssophila_DSM_17132 1 1
Dyadobacter_fermentans_DSM_18053 4 4
Cytophaga_hutchinsonii_ATCC_33406 2 2
Spirosoma_linguale_DSM_74 2 2
Parabacteroides_distasonis_ATCC_8503 1 1
Paludibacter_propionicigenes_WB4 1 1
Bacteroides_sp._CF50 1 1
Alistipes_finegoldii_DSM_17242 2 2
Bacteroides_thetaiotaomicron_VPI-5482 1 1
Bacteroides_fragilis_YCH46 1 1
Pedobacter_saltans_DSM_12145 1 1
Solitalea_canadensis_DSM_3403 2 2
Pedobacter_heparinus_DSM_2366 2 1
Fluviicola_taffensis_DSM_16823 4 3
Owenweeksia_hongkongensis_DSM_17368 1 1
Zunongwangia_profunda_SM-A87 1 1
Krokinobacter_sp._4H-3-7-5 1 1
Lacinutrix_sp._5H-3-7-4 1 1
Maribacter_sp._HTCC2170 1 1
Croceibacter_atlanticus_HTCC2559 2 2
Aequorivita_sublithincola_DSM_14238 1 1
Zobellia_galactanivorans 1 1
Muricauda_ruestringensis_DSM_13258 4 3
Cellulophaga_algicola_DSM_14237 1 1
Cellulophaga_lytica_DSM_7489 1 1
Flavobacteriaceae_bacterium_3519-10 1 1
Polaribacter_sp._MED152 1 1
Flavobacterium_indicum_GPTSA100-9 1 1
Flavobacterium_psychrophilum_JIP02/86 1 1
Flavobacterium_branchiophilum_FL-15 1 1
Flavobacterium_columnare_ATCC_49512 1 1
Flavobacterium_johnsoniae_UW101 4 4
Fibrobacter_succinogenes_subsp._succinogenes_S85 3 1
Candidatus_Protochlamydia_amoebophila_UWE25 5 5
Simkania_negevensis_Z 3 3
Planctomyces_brasiliensis_DSM_5305 1 1
Planctomyces_limnophilus_DSM_3776 1 1
Rhodopirellula_baltica_SH_1 2 2
Pirellula_staleyi_DSM_6068 1 1
Coraliomargarita_akajimensis_DSM_45221 2 1
Turneriella_parva_DSM_21527 1 1
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 1 1
Leptospira_interrogans_serovar_Lai_str._IPAV 2 2
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 1 1
Brachyspira_murdochii_DSM_12563 1 1
Brachyspira_intermedia_PWS/A 2 2
Brachyspira_hyodysenteriae_WA1 1 1
Spirochaeta_smaragdinae_DSM_11293 2 2
Sphaerochaeta_pleomorpha_str._Grapes 2 2
Sphaerochaeta_globus_str._Buddy 1 1
Sphaerochaeta_coccoides_DSM_17374 1 1
Spirochaeta_caldaria_DSM_7334 1 1
Treponema_azotonutricium_ZAS-9 1 1
Treponema_primitia_ZAS-2 1 1
Treponema_brennaborense_DSM_12168 1 1
Treponema_paraluiscuniculi_Cuniculi_A 1 1
Treponema_succinifaciens_DSM_2489 2 2
Treponema_pallidum_subsp._pallidum_SS14 2 2
Treponema_denticola_ATCC_35405 1 1
Spirochaeta_africana_DSM_8902 2 2
Spirochaeta_thermophila_DSM_6192 1 1
Thermodesulfatator_indicus_DSM_15286 1 1
Desulfurispirillum_indicum_S5 1 1
Sulfurihydrogenibium_sp._YO3AOP1 1 1
Persephonella_marina_EX-H1 1 1
Hydrogenobaculum_sp._SN 1 1
Hydrogenobaculum_sp._HO 1 1
Hydrogenobaculum_sp._Y04AAS1 1 1
Thermocrinis_albus_DSM_14484 1 1
Hydrogenobacter_thermophilus_TK-6 1 1
Candidatus_Chloracidobacterium_thermophilum_B 2 1
Granulicella_tundricola_MP5ACTX9 4 3
Granulicella_mallensis_MP5ACTX8 2 2
Terriglobus_saanensis_SP1PR4 1 1
Candidatus_Nitrospira_defluvii 4 2
Leptospirillum_ferrooxidans_C2-3 4 2
Sebaldella_termitidis_ATCC_33386 3 3
Ilyobacter_polytropus_DSM_2926 1 1
Candidatus_Methylomirabilis_oxyfera 2 2
Bacteriovorax_marinus_SJ 2 2
Bdellovibrio_bacteriovorus_HD100 2 2
Sulfurospirillum_barnesii_SES-3 1 1
Arcobacter_sp._L 1 1
Arcobacter_nitrofigilis_DSM_7299 2 2
uncultured_Sulfuricurvum_sp._RIFRC-1 2 2
Sulfuricurvum_kujiense_DSM_16994 3 3
Sulfurimonas_autotrophica_DSM_16294 1 1
Helicobacter_cinaedi_PAGU611 2 2
Sulfurovum_sp._NBC37-1 1 1
Desulfarculus_baarsii_DSM_2075 1 1
Syntrophus_aciditrophicus_SB 3 2
Desulfomonile_tiedjei_DSM_6799 10 6
Syntrophobacter_fumaroxidans_MPOB 1 1
Desulfurivibrio_alkaliphilus_AHT2 4 1
Desulfotalea_psychrophila_LSv54 4 3
Desulfobulbus_propionicus_DSM_2032 4 3
Desulfatibacillum_alkenivorans_AK-01 4 4
Desulfobacterium_autotrophicum_HRM2 1 1
Desulfovibrio_piezophilus 1 1
Desulfovibrio_aespoeensis_Aspo-2 1 1
Desulfovibrio_magneticus_RS-1 2 1
Desulfovibrio_salexigens_DSM_2638 7 4
Desulfovibrio_africanus_str._Walvis_Bay 5 2
Geobacter_sp._M21 2 2
Geobacter_uraniireducens_Rf4 11 3
Geobacter_bemidjiensis_Bem 1 1
Geobacter_sulfurreducens_KN400 2 2
Geobacter_metallireducens_GS-15 3 2
Pelobacter_propionicus_DSM_2379 2 1
Pelobacter_carbinolicus_DSM_2380 2 1
Haliangium_ochraceum_DSM_14365 4 3
Sorangium_cellulosum_'So_ce_56' 50 25
Anaeromyxobacter_dehalogenans_2CP-1 1 1
Stigmatella_aurantiaca_DW4/3-1 2 2
Corallococcus_coralloides_DSM_2259 4 4
Myxococcus_xanthus_DK_1622 6 5
Myxococcus_fulvus_HW-1 5 4
Dechloromonas_aromatica_RCB 1 1
Thauera_sp._MZ1T 2 1
Azoarcus_sp._BH72 1 1
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 1 1
Methylibium_petroleiphilum_PM1 1 1
Burkholderia_phytofirmans_PsJN 1 1
Burkholderia_xenovorans_LB400 1 1
Ralstonia_pickettii_12D 1 1
Burkholderia_sp._RPE64 4 2
Burkholderia_sp._CCGE1002 1 1
Burkholderia_thailandensis_E264 8 4
Burkholderia_pseudomallei_1106a 13 6
Burkholderia_mallei_SAVP1 13 6
Burkholderia_cenocepacia_HI2424 1 1
Burkholderia_vietnamiensis_G4 1 1
Burkholderia_glumae_BGR1 5 2
Delftia_sp._Cs1-4 2 1
Delftia_acidovorans_SPH-1 2 1
Polaromonas_naphthalenivorans_CJ2 5 3
Variovorax_paradoxus_S110 19 9
Acidovorax_avenae_subsp._avenae_ATCC_19860 1 1
Janthinobacterium_sp._Marseille 1 1
Pusillimonas_sp._T7-7 9 4
Advenella_kashmirensis_WT001 14 6
Taylorella_asinigenitalis_MCE3 8 4
Taylorella_equigenitalis_MCE9 8 4
Bordetella_petrii_DSM_12804 14 6
Bordetella_parapertussis_12822 2 1
Bordetella_bronchiseptica_RB50 4 2
Achromobacter_xylosoxidans_A8 5 3
Achromobacter_xylosoxidans 1 1
Thiobacillus_denitrificans_ATCC_25259 1 1
Gallionella_capsiferriformans_ES-2 2 1
Methylotenera_versatilis_301 1 1
Magnetococcus_marinus_MC-1 21 2
Parvularcula_bermudensis_HTCC2503 4 4
Asticcacaulis_excentricus_CB_48 9 4
Brevundimonas_subvibrioides_ATCC_15264 10 5
Caulobacter_sp._K31 12 6
Caulobacter_crescentus_NA1000 13 6
Caulobacter_segnis_ATCC_21756 10 4
Phenylobacterium_zucineum_HLK1 9 4
Erythrobacter_litoralis_HTCC2594 1 1
Novosphingobium_sp._PP1Y 1 1
Novosphingobium_aromaticivorans_DSM_12444 2 2
Sphingobium_sp._SYK-6 1 1
Sphingobium_japonicum_UT26S 1 1
Sphingomonas_sp._MM-1 1 1
Sphingomonas_wittichii_RW1 1 1
Maricaulis_maris_MCS10 10 5
Hirschia_baltica_ATCC_49814 1 1
Hyphomonas_neptunium_ATCC_15444 2 2
Dinoroseobacter_shibae_DFL_12 4 4
Phaeobacter_gallaeciensis_2.10 1 1
Pseudovibrio_sp._FO-BEG1 6 5
Jannaschia_sp._CCS1 2 2
Roseobacter_litoralis_Och_149 1 1
Roseobacter_denitrificans_OCh_114 1 1
Rhodobacter_capsulatus_SB_1003 1 1
Paracoccus_denitrificans_PD1222 1 1
Rhodospirillum_photometricum_DSM_122 3 1
Tistrella_mobilis_KA081020-065 1 1
Magnetospirillum_magneticum_AMB-1 4 4
Rhodospirillum_centenum_SW 18 7
Rhodospirillum_rubrum_F11 1 1
Azospirillum_lipoferum_4B 23 9
Azospirillum_sp._B510 22 9
Azospirillum_brasilense_Sp245 28 12
Granulibacter_bethesdensis_CGDNIH1 1 1
Polymorphum_gilvum_SL003B-26A1 1 1
Micavibrio_aeruginosavorus_ARL-13 5 3
alpha_proteobacterium_HIMB5 1 1
Candidatus_Midichloria_mitochondrii_IricVA 2 1
Neorickettsia_sennetsu_str._Miyayama 3 1
Neorickettsia_risticii_str._Illinois 3 1
Wolbachia_endosymbiont_of_Culex_quinquefasciatus_Pel 4 1
Wolbachia_sp._wRi 3 1
Ehrlichia_chaffeensis_str._Arkansas 4 1
Ehrlichia_canis_str._Jake 4 1
Ehrlichia_ruminantium_str._Gardel 5 2
Anaplasma_phagocytophilum_HZ 3 1
Anaplasma_marginale_str._Florida 3 1
Anaplasma_centrale_str._Israel 4 1
Orientia_tsutsugamushi_str._Boryong 6 2
Rickettsia_bellii_OSU_85-389 4 1
Rickettsia_canadensis_str._McKiel 8 3
Rickettsia_typhi_str._Wilmington 5 2
Rickettsia_prowazekii_str._BuV67-CWPP 5 2
Rickettsia_philipii_str._364D 8 2
Rickettsia_heilongjiangensis_054 8 3
Rickettsia_peacockii_str._Rustic 9 3
Rickettsia_felis_URRWXCal2 9 3
Rickettsia_slovaca_13-B 9 3
Rickettsia_parkeri_str._Portsmouth 8 3
Rickettsia_massiliae_MTU5 8 3
Rickettsia_japonica_YH 8 4
Rickettsia_africae_ESF-5 8 3
Rickettsia_rhipicephali_str._3-7-female6-CWPP 9 3
Rickettsia_montanensis_str._OSU_85-930 9 3
Candidatus_Rickettsia_amblyommii_str._GAT-30V 8 3
Rickettsia_australis_str._Cutlack 8 3
Rickettsia_akari_str._Hartford 9 3
Rickettsia_rickettsii_str._'Sheila_Smith' 7 2
Rickettsia_conorii_str._Malish_7 8 3
Starkeya_novella_DSM_506 2 1
Azorhizobium_caulinodans_ORS_571 2 2
Methylobacterium_chloromethanicum_CM4 2 1
Methylobacterium_extorquens_AM1 5 5
Methylobacterium_sp._4-46 2 2
Methylobacterium_populi_BJ001 1 1
Methylobacterium_nodulans_ORS_2060 2 2
Methylobacterium_radiotolerans_JCM_2831 3 2
Parvibaculum_lavamentivorans_DS-1 3 2
Sinorhizobium_fredii_NGR234 1 1
Sinorhizobium_medicae_WSM419 1 1
Sinorhizobium_meliloti_AK83 1 1
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 2 2
Rhizobium_etli_CIAT_652 1 1
Rhizobium_leguminosarum_bv._viciae_3841 2 2
Agrobacterium_tumefaciens_str._C58 2 2
Agrobacterium_radiobacter_K84 2 2
Agrobacterium_sp._H13-3 2 2
Agrobacterium_vitis_S4 1 1
Mesorhizobium_sp._BNC1 2 1
Mesorhizobium_opportunistum_WSM2075 1 1
Mesorhizobium_loti_MAFF303099 1 1
Methylocella_silvestris_BL2 4 3
Beijerinckia_indica_subsp._indica_ATCC_9039 1 1
Pelagibacterium_halotolerans_B2 2 1
Rhodomicrobium_vannielii_ATCC_17100 1 1
Hyphomicrobium_sp._MC1 7 5
Hyphomicrobium_denitrificans_ATCC_51888 3 3
Bradyrhizobium_japonicum_USDA_110 3 2
Methylocystis_sp._SC2 4 3
Saccharophagus_degradans_2-40 3 2
Cellvibrio_japonicus_Ueda107 3 2
Aggregatibacter_aphrophilus_NJ8700 1 1
Pasteurella_multocida_subsp._multocida_str._3480 1 1
Actinobacillus_succinogenes_130Z 1 1
Aeromonas_veronii_B565 2 2
Aeromonas_salmonicida_subsp._salmonicida_A449 3 3
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 2 2
Aliivibrio_salmonicida_LFI1238 2 1
Vibrio_fischeri_MJ11 2 1
Vibrio_sp._Ex25 2 1
Vibrio_harveyi_ATCC_BAA-1116 2 1
Vibrio_parahaemolyticus_RIMD_2210633 3 2
Vibrio_splendidus_LGP32 2 2
Vibrio_anguillarum_775 1 1
Vibrio_furnissii_NCTC_11218 1 1
Vibrio_vulnificus_MO6-24/O 5 3
Photobacterium_profundum_SS9 4 2
Psychromonas_ingrahamii_37 9 4
Psychromonas_sp._CNPT3 2 2
Shewanella_piezotolerans_WP3 3 3
Shewanella_loihica_PV-4 3 2
Shewanella_halifaxensis_HAW-EB4 6 5
Shewanella_sediminis_HAW-EB3 5 3
Shewanella_denitrificans_OS217 1 1
Shewanella_pealeana_ATCC_700345 5 4
Shewanella_oneidensis_MR-1 1 1
Shewanella_baltica_OS185 1 1
Shewanella_woodyi_ATCC_51908 2 2
Shewanella_sp._MR-4 1 1
Shewanella_amazonensis_SB2B 2 2
Shewanella_violacea_DSS12 5 4
Shewanella_frigidimarina_NCIMB_400 3 3
Shewanella_putrefaciens_CN-32 2 2
Colwellia_psychrerythraea_34H 1 1
Pseudoalteromonas_sp._SM9913 1 1
Pseudoalteromonas_atlantica_T6c 1 1
Pseudoalteromonas_haloplanktis_TAC125 1 1
Glaciecola_sp._4H-3-7+YE-5 2 2
Marinobacter_adhaerens_HP15 2 2
Marinobacter_sp._BSs20148 1 1
Marinobacter_hydrocarbonoclasticus_ATCC_49840 3 3
Marinobacter_aquaeolei_VT8 1 1
Alteromonas_sp._SN2 1 1
Kangiella_koreensis_DSM_16069 2 1
Hahella_chejuensis_KCTC_2396 2 2
Marinomonas_sp._MWYL1 4 3
Marinomonas_mediterranea_MMB-1 1 1
Methylomicrobium_alcaliphilum 2 1
Methylomonas_methanica_MC09 2 1
Frateuria_aurantia_DSM_6220 4 2
Stenotrophomonas_maltophilia_K279a 1 1
Xanthomonas_albilineans_GPE_PC73 1 1
Thioalkalivibrio_sp._K90mix 1 1
Halorhodospira_halophila_SL1 1 1
Allochromatium_vinosum_DSM_180 2 1
Nitrosococcus_watsonii_C-113 5 5
Nitrosococcus_halophilus_Nc4 3 3
Nitrosococcus_oceani_ATCC_19707 4 4
Coxiella_burnetii_Dugway_5J108-111 3 1
Legionella_longbeachae_NSW150 7 2
Legionella_pneumophila_str._Corby 2 1
gamma_proteobacterium_HdN1 5 2
Photorhabdus_asymbiotica 7 3
Xenorhabdus_bovienii_SS-2004 6 4
Xenorhabdus_nematophila_ATCC_19061 4 2
Providencia_stuartii_MRSN_2154 1 1
Edwardsiella_ictaluri_93-146 2 1
Rahnella_sp._Y9602 2 1
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 3 2
Yersinia_pseudotuberculosis_IP_31758 7 4
Yersinia_pestis_Pestoides_F 5 2
Serratia_sp._AS12 1 1
Serratia_sp._ATCC_39006 4 2
Serratia_plymuthica_AS9 1 1
Serratia_proteamaculans_568 5 3
Dickeya_zeae_Ech1591 1 1
Pectobacterium_wasabiae_WPP163 5 3
Pectobacterium_sp._SCC3193 4 3
Sodalis_glossinidius_str._'morsitans' 3 3
Pantoea_sp._At-9b 1 1
Pantoea_vagans_C9-1 1 1
Pantoea_ananatis_LMG_20103 3 3
Erwinia_tasmaniensis_Et1/99 1 1
Erwinia_sp._Ejp617 2 2
Erwinia_billingiae_Eb661 1 1
Erwinia_pyrifoliae_Ep1/96 2 2
Erwinia_amylovora_ATCC_49946 2 2
Cronobacter_sakazakii_ES15 4 2
Candidatus_Hamiltonella_defensa_5AT_(Acyrthosiphon_pisum) 2 2
Shigella_sonnei_Ss046 3 3
Shigella_flexneri_5_str._8401 3 3
Shigella_dysenteriae_Sd197 1 1
Shigella_boydii_CDC_3083-94 1 1
Salmonella_bongori_NCTC_12419 1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 2 2
Klebsiella_oxytoca_E718 2 1
Enterobacter_aerogenes_KCTC_2190 4 2
Escherichia_fergusonii_ATCC_35469 2 2
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 3 3
Enterobacter_sp._R4-368 4 2
Enterobacter_asburiae_LF7a 1 1
Citrobacter_rodentium_ICC168 1 1
Azotobacter_vinelandii_DJ 5 2
Pseudomonas_sp._TKP 2 2
Pseudomonas_sp._UW4 1 1
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 2 2
Pseudomonas_entomophila_L48 1 1
Pseudomonas_syringae_pv._tomato_str._DC3000 2 2
Pseudomonas_stutzeri_A1501 1 1
Pseudomonas_fulva_12-X 1 1
Pseudomonas_putida_F1 1 1
Pseudomonas_protegens_Pf-5 3 3
Pseudomonas_fluorescens_SBW25 2 2
Pseudomonas_mendocina_ymp 2 2
Pseudomonas_aeruginosa_UCBPP-PA14 2 2
Pseudomonas_sp._VLB120 1 1
Psychrobacter_sp._G 1 1
Psychrobacter_sp._PRwf-1 1 1
Psychrobacter_arcticus_273-4 2 2
Psychrobacter_cryohalolentis_K5 1 1
Methylophaga_sp._JAM1 3 3
Francisella_noatunensis_subsp._orientalis_str._Toba_04 1 1
Candidatus_Nitrosopumilus_sp._AR2 1 1
Methanocella_arvoryzae_MRE50 1 1
Methanocella_conradii_HZ254 2 1
Methanocella_paludicola_SANAE 2 1
Methanosaeta_harundinacea_6Ac 6 4
Methanosaeta_thermophila_PT 6 2
Methanosaeta_concilii_GP6 6 2
Methanosalsum_zhilinae_DSM_4017 1 1
Methanococcoides_burtonii_DSM_6242 1 1
Methanosarcina_acetivorans_C2A 8 5
Methanosarcina_mazei_Go1 2 2
Methanosarcina_barkeri_str._Fusaro 15 10
Methanosphaerula_palustris_E1-9c 1 1
Methanospirillum_hungatei_JF-1 1 1
Methanocorpusculum_labreanum_Z 2 2
Methanoplanus_petrolearius_DSM_11571 2 2
Thermococcus_sp._4557 1 1
Thermococcus_gammatolerans_EJ3 1 1
Thermoplasmatales_archaeon_BRNA1 3 1
Halopiger_xanaduensis_SH-6 1 1
Haloterrigena_turkmenica_DSM_5511 1 1
Haloquadratum_walsbyi_DSM_16790 2 2
Halogeometricum_borinquense_DSM_11551 1 1
Haloarcula_hispanica_ATCC_33960 1 1
Haloarcula_marismortui_ATCC_43049 2 1
Halalkalicoccus_jeotgali_B3 4 4
Halobacterium_salinarum_R1 1 1
Halobacterium_sp._NRC-1 1 1
Methanocaldococcus_sp._FS406-22 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   9 8
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   2 2
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   1 1
Paracoccidioides_brasiliensis_Pb03_ 1 1
Coccidioides_posadasii_str._Silveira_ 3 3
Coccidioides_immitis_RMSCC_3703_ 1 1
Coccidioides_immitis_RMSCC_2394_ 1 1
Ajellomyces_dermatitidis_ER-3_ 1 1
Histoplasma_capsulatum_H143 2 2
Histoplasma_capsulatum_H88 2 2
Histoplasma_capsulatum_G186AR 1 1
Aspergillus_fumigatus_A1163_ 1 1
Batrachochytrium_dendrobatidis_JAM81_ 1 1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   4 4
Hordeum_vulgare_22   (Domesticated barley)   12 12
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   6 6
Trypanosoma_brucei_Lister_427_v4.1 3 3
Neospora_caninum_Nc-Liverpool_6.2 3 1
Plasmodium_falciparum_HB3_ 13 13
Plasmodium_falciparum_Dd2_ 14 14
Chroococcidiopsis_thermalis_PCC_7203 30 27
Chamaesiphon_minutus_PCC_6605 44 38
Synechocystis_sp._PCC_6803_substr._PCC-P 20 16
Synechocystis_sp._PCC_6803_substr._PCC-N 20 16
Synechocystis_sp._PCC_6803_substr._GT-I 21 16
Synechocystis_sp._PCC_6803 22 17
Cyanobium_gracile_PCC_6307 8 7
Dactylococcopsis_salina_PCC_8305 10 8
Synechococcus_sp._JA-2-3B'a(2-13) 20 15
Synechococcus_sp._JA-3-3Ab 17 15
Synechococcus_sp._CC9902 5 5
Synechococcus_sp._RCC307 6 6
Synechococcus_sp._CC9605 5 5
Synechococcus_sp._WH_8102 6 6
Synechococcus_sp._WH_7803 6 6
Synechococcus_sp._PCC_7002 24 16
Synechococcus_elongatus_PCC_6301 10 10
Prochlorococcus_marinus_str._NATL1A 4 4
Prochlorococcus_marinus_str._MIT_9301 4 4
Prochlorococcus_marinus_str._AS9601 4 4
Prochlorococcus_marinus_subsp._marinus_str._CCMP1375 4 4
Prochlorococcus_marinus_subsp._pastoris_str._CCMP1986 4 4
Prochlorococcus_marinus_str._MIT_9215 4 4
Prochlorococcus_marinus_str._MIT_9211 4 4
Prochlorococcus_marinus_str._MIT_9313 7 7
Prochlorococcus_marinus_str._MIT_9312 4 4
Prochlorococcus_marinus_str._MIT_9303 7 7
Prochlorococcus_marinus_str._NATL2A 4 4
Crinalium_epipsammum_PCC_9333 43 31
Oscillatoria_nigro-viridis_PCC_7112 84 55
Oscillatoria_acuminata_PCC_6304 88 57
Arthrospira_platensis_NIES-39 59 41
Cyanothece_sp._PCC_7822 46 39
Cyanothece_sp._PCC_7425 42 34
Cyanothece_sp._PCC_7424 44 35
Cyanothece_sp._ATCC_51142 46 38
Cyanothece_sp._PCC_8801 40 31
Cyanobacterium_aponinum_PCC_10605 33 25
Cyanobacterium_stanieri_PCC_7202 26 20
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 37 25
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 40 33
Stanieria_cyanosphaera_PCC_7437 39 29
Calothrix_parietina_Calothrix_sp._PCC_6303 62 48
Cylindrospermum_stagnale_PCC_7417 51 42
Anabaena_cylindrica_PCC_7122 51 40
Mycoplasma_leachii_PG50 3 3
Mycoplasma_mycoides_subsp._mycoides_SC_str._Gladysdale 1 1
Mycoplasma_mycoides_subsp._mycoides_SC_str._PG1 1 1
Mycoplasma_bovis_Hubei-1 1 1
Gordonibacter_pamelaeae_7-10-1-b 1 1
Adlercreutzia_equolifaciens_DSM_19450 1 1
Frankia_sp._EuI1c 5 5
Frankia_sp._CcI3 1 1
Nocardiopsis_alba_ATCC_BAA-2165 4 4
Streptomyces_albus_J1074 2 2
Streptomyces_rapamycinicus_NRRL_5491 4 4
Streptomyces_davawensis_JCM_4913 4 4
Streptomyces_fulvissimus_DSM_40593 3 3
Streptomyces_venezuelae_ATCC_10712 4 3
Streptomyces_collinus_Tu_365 4 4
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 3 3
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 4 4
Saccharothrix_espanaensis_DSM_44229 12 12
Amycolatopsis_mediterranei_RB 6 6
Amycolatopsis_mediterranei_S699 6 6
Amycolatopsis_mediterranei_S699 6 6
Amycolatopsis_orientalis_HCCB10007 5 5
Propionibacterium_acidipropionici_ATCC_4875 1 1
Actinoplanes_friuliensis_DSM_7358 7 7
Rhodococcus_pyridinivorans_SB3094 1 1
Rhodococcus_erythropolis_CCM2595 5 4
Nocardia_brasiliensis_ATCC_700358 3 3
Mycobacterium_sp._MOTT36Y 1 1
Mycobacterium_abscessus_subsp._bolletii_50594 1 1
Mycobacterium_liflandii_128FXT 1 1
Mycobacterium_sp._KMS 1 1
Mycobacterium_sp._MCS 1 1
Mycobacterium_yongonense_05-1390 1 1
Mycobacterium_intracellulare_MOTT-64 1 1
Mycobacterium_indicus_pranii_MTCC_9506 1 1
Mycobacterium_intracellulare_MOTT-02 1 1
Mycobacterium_avium_subsp._paratuberculosis_MAP4 1 1
Mycobacterium_avium_subsp._paratuberculosis_K-10 1 1
Mycobacterium_canettii_CIPT_140060008 1 1
Mycobacterium_canettii_CIPT_140070008 1 1
Mycobacterium_canettii_CIPT_140070010 1 1
Mycobacterium_tuberculosis_EAI5/NITR206 2 2
Mycobacterium_tuberculosis_EAI5 1 1
Mycobacterium_tuberculosis_CAS/NITR204 2 2
Mycobacterium_tuberculosis_str._Beijing/NITR203 1 1
Mycobacterium_tuberculosis_UT205 1 1
Mycobacterium_tuberculosis_RGTB423 1 1
Mycobacterium_tuberculosis_RGTB327 1 1
Mycobacterium_tuberculosis_CTRI-2 1 1
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 1 1
Mycobacterium_tuberculosis_KZN_605 1 1
Mycobacterium_tuberculosis_KZN_4207 1 1
Mycobacterium_tuberculosis_CCDC5180 2 2
Mycobacterium_tuberculosis_CCDC5079 1 1
Mycobacterium_tuberculosis_CCDC5079 1 1
Mycobacterium_tuberculosis_H37Ra 2 2
Mycobacterium_tuberculosis_str._Haarlem 1 1
Mycobacterium_tuberculosis_F11 1 1
Mycobacterium_tuberculosis_H37Rv 2 2
Mycobacterium_tuberculosis_CDC1551 1 1
Mycobacterium_bovis_AF2122/97 1 1
Mycobacterium_bovis_BCG_str._Korea_1168P 1 1
Mycobacterium_bovis_BCG_str._Mexico 1 1
Mycobacterium_bovis_BCG_str._Tokyo_172 1 1
Mycobacterium_gilvum_Spyr1 1 1
Mycobacterium_smegmatis_str._MC2_155 2 2
Mycobacterium_kansasii_ATCC_12478 2 2
Corynebacterium_callunae_DSM_20147 2 2
Corynebacterium_glutamicum_MB001 1 1
Corynebacterium_glutamicum_SCgG2 3 2
Corynebacterium_glutamicum_SCgG1 3 2
Corynebacterium_glutamicum_ATCC_13032 2 2
Corynebacterium_glutamicum_ATCC_13032 2 2
Corynebacterium_glutamicum_ATCC_13032 2 2
Corynebacterium_diphtheriae_C7_(beta) 1 1
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 1 1
Bifidobacterium_longum_subsp._infantis_157F 1 1
Bifidobacterium_animalis_subsp._animalis_ATCC_25527 1 1
Bifidobacterium_animalis_subsp._lactis_Bl12 1 1
Bifidobacterium_animalis_subsp._lactis_B420 1 1
Bifidobacterium_animalis_subsp._lactis_ATCC_27673 1 1
Bifidobacterium_animalis_subsp._lactis_BLC1 1 1
Bifidobacterium_animalis_subsp._lactis_CNCM_I-2494 1 1
Bifidobacterium_animalis_subsp._lactis_Bi-07 1 1
Bifidobacterium_animalis_subsp._lactis_V9 1 1
Bifidobacterium_animalis_subsp._lactis_DSM_10140 1 1
Bifidobacterium_animalis_subsp._lactis_BB-12 1 1
Bifidobacterium_animalis_subsp._lactis_AD011 1 1
Actinomyces_graevenitzii_C83_ 1 1
Actinomyces_odontolyticus_ATCC_17982 1 1
Actinomyces_viscosus_C505 1 1
Erysipelothrix_rhusiopathiae_SY1027 1 1
Eubacterium_siraeum_V10Sc8a 1 1
Faecalibacterium_prausnitzii_L2-6 1 1
Clostridium_acidurici_9a 1 1
Desulfosporosinus_meridiei_DSM_13257 2 2
Desulfitobacterium_hafniense_DCB-2 1 1
Desulfotomaculum_gibsoniae_DSM_7213 2 2
Clostridium_difficile_BI1 3 3
Clostridium_difficile_R20291 3 3
Clostridium_difficile_CD196 3 3
Roseburia_intestinalis_XB6B4 1 1
Clostridium_saccharobutylicum_DSM_13864 4 4
Clostridium_autoethanogenum_DSM_10061 2 2
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 5 5
Clostridium_tetani_genome_12124569 1 1
Clostridium_perfringens_SM101 1 1
Clostridium_perfringens_str._13 2 2
Clostridium_pasteurianum_BC1 1 1
Clostridium_botulinum_H04402_065 2 2
Clostridium_botulinum_F_str._230613 3 3
Clostridium_botulinum_F_str._Langeland 3 3
Clostridium_botulinum_E3_str._Alaska_E43 3 3
Clostridium_botulinum_B1_str._Okra 3 3
Clostridium_botulinum_Ba4_str._657 3 3
Clostridium_botulinum_A2_str._Kyoto 3 3
Clostridium_botulinum_A3_str._Loch_Maree 3 3
Clostridium_botulinum_A_str._Hall 3 3
Clostridium_botulinum_A_str._ATCC_19397 3 3
Clostridium_acetobutylicum_DSM_1731 5 5
Clostridium_acetobutylicum_EA_2018 5 5
Carnobacterium_maltaromaticum_LMA28 2 2
Enterococcus_mundtii_QU_25 1 1
Enterococcus_casseliflavus_EC20 1 1
Enterococcus_faecium_Aus0085 2 2
Enterococcus_faecium_NRRL_B-2354 2 2
Enterococcus_faecium_DO 2 2
Enterococcus_faecalis_str._Symbioflor_1 1 1
Enterococcus_faecalis_D32 1 1
Enterococcus_faecalis_OG1RF 1 1
Enterococcus_faecalis_V583 1 1
Leuconostoc_gelidum_JB7 1 1
Lactobacillus_reuteri_I5007 1 1
Lactobacillus_plantarum_16 1 1
Lactobacillus_plantarum_ZJ316 1 1
Lactobacillus_plantarum_subsp._plantarum_ST-III 1 1
Lactobacillus_plantarum_subsp._plantarum_P-8 1 1
Lactobacillus_plantarum_WCFS1 1 1
Lactobacillus_brevis_KB290 1 1
Pediococcus_pentosaceus_SL4 1 1
Lactococcus_garvieae_Lg2 2 2
Lactococcus_lactis_subsp._lactis_KLDS_4.0325 1 1
Lactococcus_lactis_subsp._lactis_IO-1 1 1
Lactococcus_lactis_subsp._lactis_CV56 1 1
Lactococcus_lactis_subsp._lactis_KF147 1 1
Lactococcus_lactis_subsp._lactis_Il1403 1 1
Lactococcus_lactis_subsp._cremoris_KW2 1 1
Lactococcus_lactis_subsp._cremoris_UC509.9 1 1
Lactococcus_lactis_subsp._cremoris_A76 1 1
Lactococcus_lactis_subsp._cremoris_NZ9000 1 1
Lactococcus_lactis_subsp._cremoris_SK11 1 1
Streptococcus_suis_JS14 1 1
Streptococcus_salivarius_JIM8777 1 1
Exiguobacterium_antarcticum_B7 1 1
Paenibacillus_sp._Y412MC10 3 3
Paenibacillus_mucilaginosus_KNP414 9 5
Paenibacillus_mucilaginosus_K02 7 5
Paenibacillus_polymyxa_CR1 6 6
Paenibacillus_polymyxa_SC2 6 6
Paenibacillus_polymyxa_E681 4 4
Listeria_monocytogenes_EGD_sequence 1 1
Listeria_monocytogenes_N53-1 1 1
Listeria_monocytogenes_La111 1 1
Listeria_monocytogenes_serotype_4b_str._LL195 1 1
Listeria_monocytogenes_07PF0776 1 1
Listeria_monocytogenes_M7 2 2
Listeria_monocytogenes_J1-220 1 1
Listeria_monocytogenes_J1816 1 1
Listeria_monocytogenes_SLCC2376 1 1
Listeria_monocytogenes_SLCC5850 1 1
Listeria_monocytogenes_ATCC_19117 1 1
Listeria_monocytogenes_L312 1 1
Listeria_monocytogenes_SLCC2479 2 2
Listeria_monocytogenes_SLCC7179 2 2
Listeria_monocytogenes_SLCC2540 2 2
Listeria_monocytogenes_SLCC2378 1 1
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 1 1
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 2 2
Listeria_monocytogenes_serotype_7_str._SLCC2482 1 1
Listeria_monocytogenes_08-5578 2 2
Listeria_monocytogenes_08-5923 2 2
Listeria_monocytogenes_L99 2 2
Listeria_monocytogenes_HCC23 2 2
Listeria_monocytogenes_10403S 1 1
Listeria_monocytogenes_J0161 3 3
Listeria_monocytogenes_Finland_1998 1 1
Listeria_monocytogenes_FSL_R2-561 4 4
Listeria_monocytogenes_serotype_4b_str._F2365 1 1
Listeria_monocytogenes_EGD-e 2 2
Amphibacillus_xylanus_NBRC_15112 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 3 3
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 2 2
Bacillus_amyloliquefaciens_LFB112 1 1
Bacillus_amyloliquefaciens_CC178 2 2
Bacillus_amyloliquefaciens_Y2 1 1
Bacillus_amyloliquefaciens_IT-45 1 1
Bacillus_amyloliquefaciens_XH7 1 1
Bacillus_amyloliquefaciens_LL3 1 1
Bacillus_amyloliquefaciens_TA208 1 1
Bacillus_amyloliquefaciens_DSM_7 1 1
Bacillus_subtilis_PY79 2 2
Bacillus_subtilis_XF-1 2 2
Bacillus_subtilis_QB928 2 2
Bacillus_subtilis_BSn5 2 2
Bacillus_subtilis_subsp._subtilis_str._BAB-1 2 2
Bacillus_subtilis_subsp._subtilis_str._BSP1 2 2
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 2 2
Bacillus_subtilis_subsp._subtilis_6051-HGW 2 2
Bacillus_subtilis_subsp._spizizenii_TU-B-10 2 2
Bacillus_subtilis_subsp._spizizenii_str._W23 1 1
Bacillus_subtilis_subsp._natto_BEST195 2 2
Bacillus_infantis_NRRL_B-14911 1 1
Bacillus_toyonensis_BCT-7112 3 3
Bacillus_thuringiensis_HD-771 4 4
Bacillus_thuringiensis_HD-789 6 5
Bacillus_thuringiensis_MC28 3 3
Bacillus_thuringiensis_serovar_chinensis_CT-43 3 3
Bacillus_thuringiensis_YBT-1518 3 3
Bacillus_thuringiensis_Bt407 3 3
Bacillus_thuringiensis_serovar_konkukian_str._97-27 3 3
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 3 3
Bacillus_thuringiensis_BMB171 5 4
Bacillus_thuringiensis_serovar_finitimus_YBT-020 2 2
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 3 3
Bacillus_cereus_FRI-35 3 3
Bacillus_cereus_biovar_anthracis_str._CI 4 4
Bacillus_cereus_AH820 3 3
Bacillus_cereus_AH187 3 3
Bacillus_cereus_B4264 5 4
Bacillus_cereus_G9842 3 3
Bacillus_cereus_Q1 3 3
Bacillus_cereus_F837/76 3 3
Bacillus_cereus_NC7401 3 3
Bacillus_cereus_E33L 3 3
Bacillus_cereus_ATCC_14579 4 4
Bacillus_cereus_ATCC_10987 3 3
Bacillus_anthracis_str._H9401 3 3
Bacillus_anthracis_str._CDC_684 3 3
Bacillus_anthracis_str._'Ames_Ancestor' 2 2
Bacillus_anthracis_str._Sterne 2 2
Bacillus_anthracis_str._Ames 2 2
Bacillus_megaterium_WSH-002 1 1
Bacillus_megaterium_QM_B1551 4 3
Staphylococcus_pasteuri_SP1 1 1
Staphylococcus_lugdunensis_N920143 1 1
Staphylococcus_warneri_SG1 1 1
Staphylococcus_epidermidis_ATCC_12228 1 1
Chlorobium_phaeobacteroides_BS1 6 4
Echinicola_vietnamensis_DSM_17526 1 1
Emticicia_oligotrophica_DSM_17448 1 1
Porphyromonas_gingivalis_TDC60 1 1
Porphyromonas_gingivalis_W83 1 1
Alistipes_shahii_WAL_8301 1 1
Bacteroides_xylanisolvens_XB1A 1 1
Bacteroides_fragilis_638R 1 1
Bacteroides_fragilis_NCTC_9343 1 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 3 1
Singulisphaera_acidiphila_DSM_18658 4 4
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 1 1
Leptospira_interrogans_serovar_Lai_str._56601 2 2
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 2 2
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 1 1
Treponema_pedis_str._T_A4 1 1
Treponema_pallidum_str._Fribourg-Blanc 1 1
Treponema_pallidum_subsp._pertenue_str._Gauthier 1 1
Treponema_pallidum_subsp._pertenue_str._CDC2 1 1
Treponema_pallidum_subsp._pertenue_str._SamoaD 1 1
Treponema_pallidum_subsp._pallidum_str._Mexico_A 1 1
Treponema_pallidum_subsp._pallidum_str._Chicago 1 1
Treponema_pallidum_subsp._pallidum_DAL-1 1 1
Treponema_pallidum_subsp._pallidum_str._Nichols 1 1
Spirochaeta_thermophila_DSM_6578 1 1
Hydrogenobacter_thermophilus_TK-6 1 1
Bdellovibrio_exovorus_JSS 1 1
Bdellovibrio_bacteriovorus_str._Tiberius 3 3
Campylobacter_jejuni_Waterborne_C.jejuni_Outbreak 1 1
Campylobacter_jejuni_RM1221 1 1
Desulfocapsa_sulfexigens_DSM_10523 7 4
Desulfobacula_toluolica_Tol2 2 2
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 14 8
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 5 4
Desulfovibrio_desulfuricans_ND132 1 1
Geobacter_sp._M18 1 1
Geobacter_sulfurreducens_PCA 2 2
Sorangium_cellulosum_So0157-2 55 27
Anaeromyxobacter_dehalogenans_2CP-C 2 1
Myxococcus_stipitatus_DSM_14675 8 6
Pandoraea_pnomenusa_3kgm 2 1
Burkholderia_sp._YI23 10 5
Burkholderia_sp._CCGE1001 1 1
Burkholderia_sp._KJ006 1 1
Burkholderia_thailandensis_MSMB121 13 6
Burkholderia_pseudomallei_MSHR305 13 6
Burkholderia_pseudomallei_NCTC_13179 14 7
Burkholderia_pseudomallei_BPC006 12 6
Burkholderia_pseudomallei_1026b 13 6
Burkholderia_pseudomallei_668 11 6
Burkholderia_pseudomallei_1710b 13 6
Burkholderia_pseudomallei_K96243 13 6
Burkholderia_mallei_NCTC_10229 13 6
Burkholderia_mallei_NCTC_10247 11 5
Burkholderia_mallei_ATCC_23344 8 4
Burkholderia_ambifaria_MC40-6 1 1
Burkholderia_cenocepacia_AU_1054 1 1
Burkholderia_cenocepacia_J2315 1 1
Variovorax_paradoxus_B4 12 6
Variovorax_paradoxus_EPS 14 8
Taylorella_asinigenitalis_14/45 9 5
Taylorella_equigenitalis_14/56 7 4
Taylorella_equigenitalis_ATCC_35865 8 4
Bordetella_parapertussis_Bpp5 4 3
Bordetella_bronchiseptica_MO149 4 2
Bordetella_bronchiseptica_253 5 3
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1 1
Sulfuricella_denitrificans_skB26 3 2
Caulobacter_crescentus_CB15 13 6
Phaeobacter_gallaeciensis_DSM_17395 1 1
Phaeobacter_gallaeciensis_DSM_26640 2 2
Octadecabacter_antarcticus_307 2 2
Octadecabacter_arcticus_238 2 2
Magnetospirillum_gryphiswaldense_MSR-1_v2 4 4
Rhodospirillum_rubrum_ATCC_11170 1 1
Micavibrio_aeruginosavorus_EPB 6 3
Candidatus_Pelagibacter_ubique_HTCC1062 1 1
Wolbachia_endosymbiont_of_Drosophila_melanogaster 3 1
Wolbachia_endosymbiont_of_Onchocerca_ochengi_str._Adamawa_Cameroon 3 1
Wolbachia_endosymbiont_strain_TRS_of_Brugia_malayi 3 1
Wolbachia_endosymbiont_of_Drosophila_simulans_wHa 3 1
Wolbachia_endosymbiont_of_Drosophila_simulans_wNo 4 1
Ehrlichia_muris_AS145 4 1
Ehrlichia_ruminantium_str._Welgevonden 4 1
Ehrlichia_ruminantium_str._Welgevonden 4 1
Anaplasma_phagocytophilum_str._Dog2 3 1
Anaplasma_phagocytophilum_str._HZ2 3 1
Anaplasma_phagocytophilum_str._JM 3 1
Anaplasma_marginale_str._Dawn 3 1
Anaplasma_marginale_str._Gypsy_Plains 3 1
Anaplasma_marginale_str._St._Maries 4 1
Orientia_tsutsugamushi_str._Ikeda 7 2
Rickettsia_bellii_RML369-C 4 1
Rickettsia_canadensis_str._CA410 8 3
Rickettsia_typhi_str._B9991CWPP 5 2
Rickettsia_typhi_str._TH1527 5 2
Rickettsia_prowazekii_str._Breinl 5 2
Rickettsia_prowazekii_str._NMRC_Madrid_E 5 2
Rickettsia_prowazekii_str._RpGvF24 5 2
Rickettsia_prowazekii_str._GvV257 5 2
Rickettsia_prowazekii_str._Dachau 4 1
Rickettsia_prowazekii_str._Katsinyian 5 2
Rickettsia_prowazekii_str._Chernikova 5 2
Rickettsia_prowazekii_Rp22 5 2
Rickettsia_prowazekii_str._Madrid_E 5 2
Rickettsia_slovaca_str._D-CWPP 9 3
Rickettsia_massiliae_str._AZT80 9 3
Rickettsia_rickettsii_str._Arizona 8 3
Rickettsia_rickettsii_str._Brazil 8 3
Rickettsia_rickettsii_str._Hauke 8 3
Rickettsia_rickettsii_str._Colombia 8 3
Rickettsia_rickettsii__str._Hlp#2 8 3
Rickettsia_rickettsii_str._Hino 8 3
Rickettsia_rickettsii_str._Iowa 8 3
Methylobacterium_extorquens_DM4 2 2
Methylobacterium_extorquens_PA1 1 1
Sinorhizobium_fredii_USDA_257 1 1
Sinorhizobium_fredii_HH103 1 1
Sinorhizobium_meliloti_2011 1 1
Sinorhizobium_meliloti_GR4 1 1
Sinorhizobium_meliloti_Rm41 1 1
Sinorhizobium_meliloti_SM11 1 1
Sinorhizobium_meliloti_BL225C 1 1
Sinorhizobium_meliloti_1021 1 1
Rhizobium_etli_CFN_42 1 1
Rhizobium_etli_bv._mimosae_str._Mim1 1 1
Rhizobium_tropici_CIAT_899 1 1
Rhizobium_leguminosarum_bv._trifolii_WSM2304 2 2
Rhizobium_leguminosarum_bv._trifolii_WSM1325 1 1
Hyphomicrobium_nitrativorans_NL23 8 6
Hyphomicrobium_denitrificans_1NES1 5 4
Rhodopseudomonas_palustris_DX-1 2 2
Rhodopseudomonas_palustris_HaA2 2 2
Rhodopseudomonas_palustris_BisB5 2 1
Rhodopseudomonas_palustris_BisB18 1 1
Rhodopseudomonas_palustris_CGA009 2 1
Bradyrhizobium_sp._S23321 1 1
Bradyrhizobium_sp._BTAi1 2 1
Bradyrhizobium_oligotrophicum_S58 3 3
Bradyrhizobium_japonicum_USDA_6 5 3
Pasteurella_multocida_36950 1 1
Pasteurella_multocida_subsp._multocida_str._HN06 1 1
Pasteurella_multocida_subsp._multocida_str._Pm70 2 1
Haemophilus_influenzae_R2846 1 1
Aeromonas_hydrophila_ML09-119 2 2
Vibrio_fischeri_ES114 3 2
Vibrio_parahaemolyticus_BB22OP 2 1
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 3 2
Vibrio_nigripulchritudo_VibrioScope 2 2
Vibrio_vulnificus_CMCP6 3 2
Vibrio_vulnificus_YJ016 3 2
Shewanella_sp._W3-18-1 1 1
Shewanella_sp._ANA-3 1 1
Shewanella_baltica_BA175 1 1
Shewanella_baltica_OS678 1 1
Shewanella_baltica_OS117 1 1
Shewanella_baltica_OS223 1 1
Shewanella_baltica_OS195 1 1
Shewanella_baltica_OS155 1 1
Shewanella_sp._MR-7 1 1
Shewanella_putrefaciens_200 2 2
Glaciecola_psychrophila_170 1 1
Alteromonas_macleodii_str._'English_Channel_615' 1 1
Alteromonas_macleodii_str._'English_Channel_673' 2 2
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 1 1
Alteromonas_macleodii_ATCC_27126 1 1
Alcanivorax_dieselolei_B5 1 1
Thalassolituus_oleivorans_MIL-1 1 1
Stenotrophomonas_maltophilia_D457 1 1
Stenotrophomonas_maltophilia_JV3 1 1
Stenotrophomonas_maltophilia_R551-3 1 1
Thioalkalivibrio_nitratireducens_DSM_14787 3 2
Thioflavicoccus_mobilis_8321 3 2
Coxiella_burnetii_CbuK_Q154 3 1
Coxiella_burnetii_CbuG_Q212 3 1
Coxiella_burnetii_RSA_331 3 1
Coxiella_burnetii_RSA_493 3 1
Legionella_pneumophila_str._Paris 2 1
Legionella_pneumophila_str._Lens 2 1
Legionella_pneumophila_subsp._pneumophila_LPE509 2 1
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 2 1
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 2 1
Legionella_pneumophila_subsp._pneumophila 2 1
Legionella_pneumophila_subsp._pneumophila 2 1
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 2 1
Legionella_pneumophila_2300/99_Alcoy 2 1
Morganella_morganii_subsp._morganii_KT 1 1
Rahnella_aquatilis_HX2 3 2
Yersinia_pseudotuberculosis_PB1/+ 6 3
Yersinia_pseudotuberculosis_YPIII 5 2
Yersinia_pseudotuberculosis_IP_32953 5 2
Yersinia_pestis_biovar_Microtus_str._91001 5 2
Yersinia_pestis_A1122 2 1
Yersinia_pestis_Z176003 5 2
Yersinia_pestis_D182038 5 2
Yersinia_pestis_D106004 5 2
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 5 2
Yersinia_pestis_Nepal516 5 2
Yersinia_pestis_Antiqua 5 2
Yersinia_pestis_Angola 3 1
Yersinia_pestis_CO92 2 1
Yersinia_pestis_KIM10+ 5 2
Serratia_sp._AS13 1 1
Serratia_plymuthica_S13 1 1
Serratia_plymuthica_4Rx13 1 1
Serratia_marcescens_FGI94 4 2
Serratia_marcescens_WW4 9 5
Serratia_liquefaciens_ATCC_27592 2 2
Dickeya_dadantii_3937 1 1
Pantoea_ananatis_LMG_5342 5 3
Pantoea_ananatis_PA13 8 6
Pantoea_ananatis_AJ13355 5 3
Erwinia_pyrifoliae_DSM_12163 1 1
Erwinia_amylovora_CFBP1430 2 2
Cronobacter_sakazakii_CMCC_45402 5 3
Shigella_sonnei_53G 5 5
Shigella_flexneri_2002017 4 3
Shigella_flexneri_2a_str._2457T 3 2
Shigella_flexneri_2a_str._301 4 3
Shigella_boydii_Sb227 3 3
Salmonella_bongori_N268-08 1 1
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 3 3
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 3 3
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 2 2
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 3 3
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 3 3
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 3 3
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 3 3
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 3 3
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 3 3
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 3 3
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 3 3
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 3 3
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 3 3
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 3 3
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 3 3
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 3 3
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 3 3
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 3 3
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 3 3
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 3 3
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 3 3
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 3 3
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 2 2
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 2 2
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 2 2
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 2 2
Salmonella_enterica_serovar_Bovismorbificans_genomics 3 3
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 3 3
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 3 3
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 3 3
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 3 3
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 2 2
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 2 2
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 2 2
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 3 3
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 3 3
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 3 3
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 3 3
Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 2 2
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 2 2
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 2 2
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 3 3
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 1 1
Enterobacter_aerogenes_EA1509E 4 2
Escherichia_coli_E24377A 5 4
Escherichia_coli_LY180 5 4
Escherichia_coli_APEC_O78 5 4
Escherichia_coli_O7:K1_str._CE10 6 6
Escherichia_coli_O104:H4_str._2009EL-2050 6 5
Escherichia_coli_O104:H4_str._2009EL-2071 6 5
Escherichia_coli_O104:H4_str._2011C-3493 6 5
Escherichia_coli_P12b 5 4
Escherichia_coli_042 9 9
Escherichia_coli_Xuzhou21 14 12
Escherichia_coli_UMNK88 5 4
Escherichia_coli_KO11FL 3 2
Escherichia_coli_KO11FL 3 2
Escherichia_coli_IAI39 6 6
Escherichia_coli_UMN026 12 11
Escherichia_coli_55989 5 4
Escherichia_coli_S88 2 1
Escherichia_coli_IAI1 6 5
Escherichia_coli_W 5 4
Escherichia_coli_W 5 4
Escherichia_coli_DH1 5 4
Escherichia_coli_DH1 5 4
Escherichia_coli_ATCC_8739 3 2
Escherichia_coli_BL21(DE3) 2 2
Escherichia_coli_BL21(DE3) 2 2
Escherichia_coli_SMS-3-5 8 7
Escherichia_coli_SE11 6 5
Escherichia_coli_O103:H2_str._12009 3 3
Escherichia_coli_HS 3 3
Escherichia_coli_ETEC_H10407 7 6
Escherichia_coli_O55:H7_str._RM12579 10 8
Escherichia_coli_O55:H7_str._CB9615 11 9
Escherichia_coli_O26:H11_str._11368 3 3
Escherichia_coli_O111:H-_str._11128 3 3
Escherichia_coli_O127:H6_str._E2348/69 1 1
Escherichia_coli_O157:H7_str._TW14359 12 10
Escherichia_coli_O157:H7_str._EC4115 11 9
Escherichia_coli_O157:H7_str._Sakai 14 12
Escherichia_coli_O157:H7_str._EDL933 14 12
Escherichia_coli_str._K-12_substr._MDS42 4 3
Escherichia_coli_BW2952 1 1
Escherichia_coli_str._K-12_substr._MG1655 3 2
Escherichia_coli_str._K-12_substr._W3110 5 4
Escherichia_coli_str._K-12_substr._DH10B 5 4
Escherichia_coli_B_str._REL606 6 5
Azotobacter_vinelandii_CA6 5 2
Azotobacter_vinelandii_CA 5 2
Pseudomonas_syringae_pv._phaseolicola_1448A 1 1
Pseudomonas_syringae_pv._syringae_B728a 1 1
Pseudomonas_stutzeri_CCUG_29243 1 1
Pseudomonas_stutzeri_DSM_10701 1 1
Pseudomonas_stutzeri_DSM_4166 1 1
Pseudomonas_stutzeri_RCH2 1 1
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 1 1
Pseudomonas_monteilii_SB3101 1 1
Pseudomonas_monteilii_SB3078 1 1
Pseudomonas_putida_H8234 1 1
Pseudomonas_putida_HB3267 1 1
Pseudomonas_putida_NBRC_14164 1 1
Pseudomonas_putida_DOT-T1E 1 1
Pseudomonas_putida_S16 1 1
Pseudomonas_putida_BIRD-1 1 1
Pseudomonas_putida_ND6 1 1
Pseudomonas_putida_KT2440 1 1
Pseudomonas_putida_GB-1 1 1
Pseudomonas_protegens_CHA0 3 3
Pseudomonas_poae_RE*1-1-14 2 2
Pseudomonas_fluorescens_F113 2 2
Pseudomonas_fluorescens_A506 2 2
Pseudomonas_fluorescens_R124 1 1
Pseudomonas_fluorescens_Pf0-1 1 1
Pseudomonas_resinovorans_NBRC_106553 2 2
Pseudomonas_mendocina_NK-01 2 2
Pseudomonas_aeruginosa_SCV20265 2 2
Pseudomonas_aeruginosa_MTB-1 2 2
Pseudomonas_aeruginosa_LES431 2 2
Pseudomonas_aeruginosa_RP73 2 2
Pseudomonas_aeruginosa_B136-33 3 3
Pseudomonas_aeruginosa_PA1R 1 1
Pseudomonas_aeruginosa_PA1 2 2
Pseudomonas_aeruginosa_DK2 2 2
Pseudomonas_aeruginosa_NCGM2.S1 2 2
Pseudomonas_aeruginosa_M18 2 2
Pseudomonas_aeruginosa_LESB58 2 2
Pseudomonas_aeruginosa_PA7 2 2
Pseudomonas_aeruginosa_PAO1 3 3
Acinetobacter_baumannii__ATCC_19606 1 1
Methylophaga_sp._JAM7 4 4
Francisella_noatunensis_subsp._orientalis_LADL--07-285A 2 2
Candidatus_Nitrososphaera_gargensis_Ga9.2 1 1
Sulfolobus_acidocaldarius_SUSAZ 1 1
Methanolobus_psychrophilus_R15 2 2
Methanoregula_formicica_Methanoregula_formicicum_SMSP 1 1
Archaeoglobus_sulfaticallidus_PM70-1 1 1
Thermococcus_sp._CL1 1 1
Thermococcus_litoralis_DSM_5473 1 1
Halovivax_ruber_XH-70 2 1
Natrinema_pellirubrum_DSM_15624 3 1
Natronococcus_occultus_SP4 1 1
Haloquadratum_walsbyi_C23 5 3
Halorhabdus_tiamatea_SARL4B 1 1

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   7 7
Pan_troglodytes_69_2.1.4   (Chimpanzee)   6 6
Gorilla_gorilla_69_3.1   (Western gorilla)   9 9
Pongo_abelii_69_2   (Sumatran orangutan)   8 8
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   7 7
Macaca_mulatta_69_1   (Rhesus monkey)   11 9
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   5 5
Otolemur_garnettii_69_3   (Small-eared galago)   5 5
Microcebus_murinus_69_1   (Gray mouse lemur)   4 4
Rattus_norvegicus_69_3.4   (Norway rat)   9 7
Mus_musculus_69_38   (House mouse)   6 6
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   5 5
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   5 5
Cavia_porcellus_69_3   (Domestic guinea pig)   5 5
Oryctolagus_cuniculus_69_2   (Rabbit)   5 5
Ochotona_princeps_69   (American pika)   5 5
Tupaia_belangeri_69   (Northern tree shrew)   3 3
Sus_scrofa_69_10.2   (Pig)   4 4
Bos_taurus_69_3.1   (Cattle)   6 6
Vicugna_pacos_69_1   (Alpaca)   4 4
Tursiops_truncatus_69_1   (Bottlenose dolphin)   6 6
Mustela_putorius_furo_69_1.0   (Domestic ferret)   6 5
Ailuropoda_melanoleuca_69_1   (Giant panda)   6 6
Canis_familiaris_69_3.1   (Dog)   5 5
Felis_catus_69   (Domestic cat)   4 4
Equus_caballus_69_2   (Horse)   6 6
Myotis_lucifugus_69_2.0   (Little brown bat)   6 6
Pteropus_vampyrus_69_1   (Large flying fox)   5 5
Sorex_araneus_69_1   (European shrew)   4 4
Erinaceus_europaeus_69   (Western European hedgehog)   3 3
Procavia_capensis_69_1   (Cape rock hyrax)   3 3
Loxodonta_africana_69_3   (African savanna elephant)   5 5
Echinops_telfairi_69   (Small Madagascar hedgehog)   4 4
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   5 5
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   2 2
Macropus_eugenii_69_1.0   (Tammar wallaby)   4 4
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   5 5
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   9 9
Ornithorhynchus_anatinus_69_5   (Platypus)   4 4
Petromyzon_marinus_69_7.0   (Sea lamprey)   7 6
Meleagris_gallopavo_69_2   (Turkey)   4 4
Gallus_gallus_69_2   (Chicken)   7 7
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   4 4
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   9 6
Anolis_carolinensis_69_2.0   (Green anole)   3 3
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   5 5
Latimeria_chalumnae_69_1   (Coelacanth)   6 5
Gadus_morhua_69_1   (Atlantic cod)   8 8
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   9 9
Takifugu_rubripes_69_4   (Torafugu)   7 7
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   6 6
Oryzias_latipes_69_1   (Japanese medaka)   7 7
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   10 8
Oreochromis_niloticus_69_1.0   (Nile tilapia)   8 8
Danio_rerio_69_9   (Zebrafish)   8 8
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   4 4
Ciona_intestinalis_69   (Vase tunicate)   3 3
Drosophila_melanogaster_69_5   (Fruit fly)   2 2
Arabidopsis_thaliana_10   (Thale cress)   4 4

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   18 18
Homo_sapiens__(NCBI_version)   (Human)   7 7
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   6 6
Heliconius_numata__(Incomplete) 1 1
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   2 1
Picea_sitchensis__(Incomplete)   (Sitka spruce)   3 3
Lotus_japonicus__(Early_assembly) 3 3
Malus_x_domestica_(Duplicate)   (Apple)   25 24
Ricinus_communis__(Early_assembly)   (Castor bean)   4 4
Nicotiana_benthamiana_0.4.4_(Early_draft) 9 9
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   4 4
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   4 4
Phoenix_dactylifera__(Early_draft)   (Date palm)   6 6
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 2 2
Wolbachia_endosymbiont_of_Brugia_malayi_v1.0_(Broad_Institute) 3 1
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 2 1
NCBI_plasmid_sequences_(Plasmids) 293 209
Protein_Data_Bank_(all_PDB_sequenc) 92 84
NCBI_2017_08_genome 158700 133321
NCBI_viral_sequences_(Viral) 69 69
Protozoadb_2010_08_(Protozoadb) 92 90
TargetDB__(Targets) 71 58
PDB_chains_(SCOP_1.75)_(PDB) 4 4
UniProt__viral_sequences_(Viral) 17 17
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 124 116
STRING_v9.0.5_(STRING) 2840 2195
Uniprot_2018_03_genome 50077 40835

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.