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Home > SCOP hierarchy > TTP0101/SSO1404-like > Domain combinations

Domain combinations for TTP0101/SSO1404-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a TTP0101/SSO1404-like domain in that genome.

Complete genomes
Genome Number Proteins

Amphimedon_queenslandica 1 1

Thermobaculum_terrenum_ATCC_BAA-798 1 1

Pseudanabaena_sp._PCC_7367 1 1

Synechocystis_sp._PCC_6803 3 3

Thermosynechococcus_sp._NK55 1 1

Synechococcus_sp._PCC_7502 2 2

Synechococcus_sp._PCC_6312 2 2

Microcoleus_sp._PCC_7113 3 3

Cyanothece_sp._PCC_8802 2 2

Gloeocapsa_sp._PCC_7428 2 2

Halothece_sp._PCC_7418 2 2

Microcystis_aeruginosa_NIES-843 1 1

Rivularia_sp._PCC_7116 2 2

Calothrix_sp._PCC_7507 3 3

Anabaena_variabilis_ATCC_29413 1 1

Nostoc_sp._PCC_7107 2 2

Nostoc_punctiforme_PCC_73102 1 1

Nostoc_sp._PCC_7120 2 2

Nostoc_sp._PCC_7524 2 2

Anabaena_sp._90 1 1

Mycoplasma_arthritidis_158L3-1 1 1

Mycoplasma_synoviae_53 1 1

Mycoplasma_gallisepticum_str._F 1 1

Eggerthella_sp._YY7918 3 3

Eggerthella_lenta_DSM_2243 1 1

Slackia_heliotrinireducens_DSM_20476 1 1

Olsenella_uli_DSM_7084 1 1

Coriobacterium_glomerans_PW2 1 1

Rubrobacter_xylanophilus_DSM_9941 1 1

Nakamurella_multipartita_DSM_44233 1 1

Acidothermus_cellulolyticus_11B 1 1

Frankia_sp._EAN1pec 1 1

Frankia_alni_ACN14a 1 1

Thermomonospora_curvata_DSM_43183 1 1

Saccharopolyspora_erythraea_NRRL_2338 1 1

Propionibacterium_propionicum_F0230a 2 2

Microlunatus_phosphovorus_NM-1 1 1

Propionibacterium_freudenreichii_subsp._shermanii_CIRM-BIA1 1 1

Salinispora_tropica_CNB-440 1 1

Gordonia_polyisoprenivorans_VH2 1 1

Mycobacterium_canettii_CIPT_140010059 1 1

Mycobacterium_africanum_GM041182 1 1

Mycobacterium_tuberculosis_KZN_1435 1 1

Mycobacterium_tuberculosis 1 1

Mycobacterium_bovis_BCG_str._Pasteur_1173P2 1 1

Corynebacterium_ulcerans_0102 1 1

Corynebacterium_diphtheriae_NCTC_13129 1 1

Rothia_mucilaginosa_DY-18 1 1

Bifidobacterium_animalis_subsp._lactis_Bl-04 1 1

Bifidobacterium_dentium_Bd1 1 1

Bifidobacterium_breve_ACS-071-V-Sch8b 1 1

Bifidobacterium_adolescentis_ATCC_15703 1 1

Actinomyces_sp._F0330 1 1

Caldilinea_aerophila_DSM_14535_=_NBRC_104270 1 1

Anaerolinea_thermophila_UNI-1 3 3

Thermomicrobium_roseum_DSM_5159 1 1

Herpetosiphon_aurantiacus_DSM_785 4 4

Roseiflexus_sp._RS-1 3 3

Roseiflexus_castenholzii_DSM_13941 3 3

Chloroflexus_sp._MS-G 2 2

Chloroflexus_sp._Y-400-fl 3 3

Chloroflexus_aggregans_DSM_9485 2 2

Chloroflexus_aurantiacus_J-10-fl 3 3

Truepera_radiovictrix_DSM_17093 2 2

Deinococcus_gobiensis_I-0 1 1

Deinococcus_geothermalis_DSM_11300 1 1

Marinithermus_hydrothermalis_DSM_14884 3 3

Meiothermus_silvanus_DSM_9946 3 3

Meiothermus_ruber_DSM_1279 2 2

Thermus_sp._CCB_US3_UF1 2 2

Thermus_thermophilus_HB27 2 2

Finegoldia_magna_ATCC_29328 1 1

Veillonella_parvula_DSM_2008 1 1

Megasphaera_elsdenii_DSM_20460 2 2

Acidaminococcus_intestini_RyC-MR95 1 1

Acidaminococcus_fermentans_DSM_20731 1 1

Selenomonas_sputigena_ATCC_35185 1 1

Clostridium_clariflavum_DSM_19732 1 1

Clostridium_cellulolyticum_H10 2 2

Clostridium_thermocellum_ATCC_27405 2 2

Ethanoligenens_harbinense_YUAN-3 1 1

Ruminococcus_sp. 1 1

Ruminococcus_albus_7 1 1

Sulfobacillus_acidophilus_DSM_10332 1 1

Candidatus_Desulforudis_audaxviator_MP104C 2 2

Thermincola_potens_JR 3 3

Pelotomaculum_thermopropionicum_SI 2 2

Desulfosporosinus_acidiphilus_SJ4 1 1

Desulfosporosinus_orientis_DSM_765 1 1

Syntrophobotulus_glycolicus_DSM_8271 2 2

Desulfitobacterium_hafniense_Y51 1 1

Desulfotomaculum_reducens_MI-1 3 3

Desulfotomaculum_acetoxidans_DSM_771 5 5

Desulfotomaculum_kuznetsovii_DSM_6115 3 3

Desulfotomaculum_carboxydivorans_CO-1-SRB 2 2

Desulfotomaculum_ruminis_DSM_2154 2 2

Acetobacterium_woodii_DSM_1030 1 1

Eubacterium_eligens_ATCC_27750 2 2

Eubacterium_limosum_KIST612 1 1

Clostridium_difficile_630 1 1

Filifactor_alocis_ATCC_35896 2 2

Eubacterium_rectale_ATCC_33656 2 2

Roseburia_hominis_A2-183 1 1

Roseburia_intestinalis 1 1

Butyrivibrio_fibrisolvens 1 1

Syntrophothermus_lipocalidus_DSM_12680 2 2

Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 4 4

Heliobacterium_modesticaldum_Ice1 1 1

Alkaliphilus_metalliredigens_QYMF 2 2

Candidatus_Arthromitus_sp._SFB-mouse-Japan 1 1

Clostridium_sp._BNL1100 1 1

Clostridium_novyi_NT 1 1

Clostridium_kluyveri_DSM_555 1 1

Mahella_australiensis_50-1_BON 1 1

Thermosediminibacter_oceani_DSM_16646 1 1

Caldicellulosiruptor_obsidiansis_OB47 2 2

Caldicellulosiruptor_kronotskyensis_2002 1 1

Caldicellulosiruptor_hydrothermalis_108 2 2

Caldicellulosiruptor_owensensis_OL 1 1

Caldicellulosiruptor_lactoaceticus_6A 3 3

Caldicellulosiruptor_kristjanssonii_177R1B 3 3

Caldicellulosiruptor_saccharolyticus_DSM_8903 1 1

Caldicellulosiruptor_bescii_DSM_6725 2 2

Thermoanaerobacterium_xylanolyticum_LX-11 2 2

Thermoanaerobacterium_thermosaccharolyticum_DSM_571 2 2

Thermodesulfobium_narugense_DSM_14796 2 2

Coprothermobacter_proteolyticus_DSM_5265 1 1

Tepidanaerobacter_acetatoxydans_Re1 1 1

Thermoanaerobacter_tengcongensis_MB4 1 1

Carboxydothermus_hydrogenoformans_Z-2901 1 1

Moorella_thermoacetica_ATCC_39073 2 2

Ammonifex_degensii_KC4 2 2

Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 2 2

Thermoanaerobacter_pseudethanolicus_ATCC_33223 1 1

Thermoanaerobacter_sp._X514 1 1

Thermoanaerobacter_italicus_Ab9 1 1

Thermoanaerobacter_wiegelii_Rt8.B1 1 1

Thermoanaerobacter_brockii_subsp._finnii_Ako-1 1 1

Acetohalobium_arabaticum_DSM_5501 1 1

Halothermothrix_orenii_H_168 1 1

Halanaerobium_hydrogeniformans 1 1

Melissococcus_plutonius_DAT561 1 1

Enterococcus_sp._7L76 1 1

Enterococcus_hirae_ATCC_9790 1 1

Enterococcus_faecium_Aus0004 2 2

Lactobacillus_sanfranciscensis_TMW_1.1304 1 1

Lactobacillus_ruminis_ATCC_27782 1 1

Lactobacillus_fermentum_IFO_3956 1 1

Lactobacillus_buchneri_NRRL_B-30929 1 1

Lactobacillus_buchneri 1 1

Streptococcus_sp._I-G2 1 1

Streptococcus_gallolyticus_UCN34 2 2

Streptococcus_pasteurianus_ATCC_43144 1 1

Streptococcus_dysgalactiae_subsp._equisimilis_GGS_124 1 1

Streptococcus_infantarius_subsp._infantarius_CJ18 1 1

Streptococcus_macedonicus_ACA-DC_198 1 1

Streptococcus_parasanguinis_ATCC_15912 1 1

Streptococcus_agalactiae_A909 1 1

Streptococcus_mutans_NN2025 1 1

Streptococcus_thermophilus_LMD-9 3 3

Streptococcus_sanguinis_SK36 1 1

Streptococcus_gordonii_str._Challis_substr._CH1 1 1

Exiguobacterium_sibiricum_255-15 1 1

Kyrpidia_tusciae_DSM_2912 2 2

Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 1 1

Paenibacillus_terrae_HPL-003 1 1

Listeria_seeligeri_serovar_1/2b_str._SLCC3954 1 1

Listeria_ivanovii_subsp._ivanovii_PAM_55 1 1

Geobacillus_thermoglucosidasius_C56-YS93 2 2

Anoxybacillus_flavithermus_WK1 1 1

Geobacillus_sp._WCH70 2 2

Geobacillus_thermodenitrificans_NG80-2 1 1

Bacillus_halodurans_C-125 1 1

Bacillus_clausii_KSM-K16 1 1

Staphylococcus_lugdunensis_HKU09-01 1 1

Staphylococcus_epidermidis_RP62A 1 1

Candidatus_Cloacamonas_acidaminovorans 2 2

Melioribacter_roseus_P3M 2 2

Ignavibacterium_album_JCM_16511 2 2

Pelodictyon_phaeoclathratiforme_BU-1 2 2

Chlorobium_luteolum_DSM_273 1 1

Chlorobium_chlorochromatii_CaD3 1 1

Chlorobium_phaeobacteroides_DSM_266 3 3

Chlorobium_phaeovibrioides_DSM_265 1 1

Chlorobium_limicola_DSM_245 2 2

Chlorobium_tepidum_TLS 1 1

Chloroherpeton_thalassium_ATCC_35110 1 1

Haliscomenobacter_hydrossis_DSM_1100 3 3

Saprospira_grandis_str._Lewin 1 1

Niastella_koreensis_GR20-10 1 1

Rhodothermus_marinus_DSM_4252 3 3

Flexibacter_litoralis_DSM_6794 2 2

Belliella_baltica_DSM_15883 1 1

Spirosoma_linguale_DSM_74 1 1

Runella_slithyformis_DSM_19594 1 1

Parabacteroides_distasonis_ATCC_8503 1 1

Tannerella_forsythia_ATCC_43037 1 1

Odoribacter_splanchnicus_DSM_20712 1 1

Bacteroides_sp._CF50 1 1

Prevotella_intermedia_17 1 1

Prevotella_denticola_F0289 1 1

Prevotella_ruminicola_23 1 1

Porphyromonas_asaccharolytica_DSM_20707 1 1

Porphyromonas_gingivalis_ATCC_33277 2 2

Bacteroides_helcogenes_P_36-108 1 1

Bacteroides_fragilis_YCH46 1 1

Fluviicola_taffensis_DSM_16823 1 1

Zunongwangia_profunda_SM-A87 2 2

Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 1 1

Ornithobacterium_rhinotracheale_DSM_15997 1 1

Capnocytophaga_canimorsus_Cc5 1 1

Weeksella_virosa_DSM_16922 1 1

Flavobacterium_psychrophilum_JIP02/86 1 1

Flavobacterium_branchiophilum_FL-15 1 1

Fibrobacter_succinogenes_subsp._succinogenes_S85 2 2

Phycisphaera_mikurensis_NBRC_102666 1 1

Isosphaera_pallida_ATCC_43644 1 1

Planctomyces_brasiliensis_DSM_5305 2 2

Planctomyces_limnophilus_DSM_3776 1 1

Pirellula_staleyi_DSM_6068 2 2

Methylacidiphilum_infernorum_V4 2 2

Akkermansia_muciniphila_ATCC_BAA-835 1 1

Fretibacterium_fastidiosum 2 2

Thermovirga_lienii_DSM_17291 3 3

Aminobacterium_colombiense_DSM_12261 1 1

Turneriella_parva_DSM_21527 1 1

Leptospira_interrogans_serovar_Lai_str._IPAV 1 1

Brachyspira_murdochii_DSM_12563 1 1

Spirochaeta_smaragdinae_DSM_11293 1 1

Sphaerochaeta_pleomorpha_str._Grapes 1 1

Sphaerochaeta_globus_str._Buddy 1 1

Spirochaeta_caldaria_DSM_7334 1 1

Treponema_azotonutricium_ZAS-9 1 1

Treponema_brennaborense_DSM_12168 1 1

Treponema_succinifaciens_DSM_2489 2 2

Treponema_denticola_ATCC_35405 1 1

Spirochaeta_thermophila_DSM_6192 1 1

Thermodesulfatator_indicus_DSM_15286 3 3

Thermodesulfobacterium_sp._OPB45 3 3

Desulfurispirillum_indicum_S5 2 2

Calditerrivibrio_nitroreducens_DSM_19672 2 2

Deferribacter_desulfuricans_SSM1 1 1

Flexistipes_sinusarabici_DSM_4947 3 3

Marinitoga_piezophila_KA3 2 2

Petrotoga_mobilis_SJ95 1 1

Mesotoga_prima_MesG1.Ag.4.2 2 2

Kosmotoga_olearia_TBF_19.5.1 2 2

Fervidobacterium_pennivorans_DSM_9078 2 2

Fervidobacterium_nodosum_Rt17-B1 3 3

Thermosipho_melanesiensis_BI429 3 3

Thermosipho_africanus_TCF52B 4 4

Thermotoga_lettingae_TMO 1 1

Thermotoga_thermarum_DSM_5069 2 2

Thermotoga_sp._RQ2 1 1

Thermotoga_petrophila_RKU-1 1 1

Thermotoga_neapolitana_DSM_4359 1 1

Thermotoga_maritima_MSB8 1 1

Thermovibrio_ammonificans_HB-1 5 4

Sulfurihydrogenibium_sp._YO3AOP1 1 1

Sulfurihydrogenibium_azorense_Az-Fu1 2 2

Persephonella_marina_EX-H1 1 1

Hydrogenobaculum_sp._SN 1 1

Hydrogenobaculum_sp._HO 1 1

Hydrogenobacter_thermophilus_TK-6 1 1

Elusimicrobium_minutum_Pei191 1 1

uncultured_Termite_group_1_bacterium_phylotype_Rs-D17 3 3

Dictyoglomus_turgidum_DSM_6724 1 1

Dictyoglomus_thermophilum_H-6-12 2 2

Caldisericum_exile_AZM16c01 1 1

Candidatus_Chloracidobacterium_thermophilum_B 2 2

Acidobacterium_capsulatum_ATCC_51196 1 1

Thermodesulfovibrio_yellowstonii_DSM_11347 4 4

Streptobacillus_moniliformis_DSM_12112 1 1

Leptotrichia_buccalis_C-1013-b 2 2

Ilyobacter_polytropus_DSM_2926 1 1

Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 1 1

Candidatus_Methylomirabilis_oxyfera 1 1

Nitratifractor_salsuginis_DSM_16511 2 2

Sulfurospirillum_deleyianum_DSM_6946 1 1

Sulfurospirillum_barnesii_SES-3 1 1

Arcobacter_sp._L 1 1

Arcobacter_nitrofigilis_DSM_7299 1 1

Campylobacter_hominis_ATCC_BAA-381 1 1

Campylobacter_curvus_525.92 1 1

Campylobacter_concisus_13826 1 1

Campylobacter_jejuni_subsp._doylei_269.97 1 1

Campylobacter_sp._03-427 1 1

Campylobacter_fetus_subsp._fetus_82-40 1 1

Wolinella_succinogenes_DSM_1740 2 2

Helicobacter_cetorum_MIT_00-7128 1 1

Helicobacter_mustelae_12198 1 1

Helicobacter_cinaedi_PAGU611 1 1

Desulfarculus_baarsii_DSM_2075 2 2

Desulfobacca_acetoxidans_DSM_11109 3 3

Syntrophus_aciditrophicus_SB 3 3

Desulfomonile_tiedjei_DSM_6799 1 1

Syntrophobacter_fumaroxidans_MPOB 1 1

Desulfobulbus_propionicus_DSM_2032 1 1

Desulfobacterium_autotrophicum_HRM2 1 1

Desulfovibrio_magneticus_RS-1 1 1

Desulfovibrio_vulgaris_subsp._vulgaris_DP4 1 1

Geobacter_daltonii_FRC-32 1 1

Geobacter_uraniireducens_Rf4 1 1

Geobacter_metallireducens_GS-15 1 1

Haliangium_ochraceum_DSM_14365 1 1

Sorangium_cellulosum_'So_ce_56' 2 2

Myxococcus_xanthus_DK_1622 2 2

Myxococcus_fulvus_HW-1 1 1

Chromobacterium_violaceum_ATCC_12472 1 1

Neisseria_meningitidis_alpha14 1 1

Neisseria_lactamica_020-06 2 2

Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 2 2

Leptothrix_cholodnii_SP-6 1 1

Verminephrobacter_eiseniae_EF01-2 1 1

Alicycliphilus_denitrificans_K601 1 1

Ramlibacter_tataouinensis_TTB310 1 1

Rhodoferax_ferrireducens_T118 1 1

Acidovorax_ebreus_TPSY 1 1

Acidovorax_avenae_subsp._avenae_ATCC_19860 2 2

Nitrosomonas_eutropha_C91 3 3

Nitrosomonas_europaea_ATCC_19718 3 3

Methylobacillus_flagellatus_KT 1 1

Magnetococcus_marinus_MC-1 1 1

Parvularcula_bermudensis_HTCC2503 1 1

Sphingobium_sp._SYK-6 1 1

Sphingomonas_sp._MM-1 1 1

Zymomonas_mobilis_subsp._mobilis_NCIMB_11163 1 1

Dinoroseobacter_shibae_DFL_12 1 1

Ketogulonicigenium_vulgare_Y25 1 1

Ketogulonigenium_vulgarum_WSH-001 1 1

Rhodobacter_capsulatus_SB_1003 2 2

Tistrella_mobilis_KA081020-065 3 3

Rhodospirillum_centenum_SW 2 2

Rhodospirillum_rubrum_F11 4 4

Azospirillum_lipoferum_4B 2 2

Azospirillum_sp._B510 3 3

Gluconacetobacter_diazotrophicus_PAl_5 2 2

Candidatus_Puniceispirillum_marinum_IMCC1322 1 1

Methylobacterium_chloromethanicum_CM4 1 1

Methylobacterium_sp._4-46 2 2

Methylobacterium_nodulans_ORS_2060 1 1

Parvibaculum_lavamentivorans_DS-1 1 1

Rhodomicrobium_vannielii_ATCC_17100 2 2

Nitrobacter_winogradskyi_Nb-255 2 2

Teredinibacter_turnerae_T7901 1 1

Cellvibrio_japonicus_Ueda107 1 1

Aggregatibacter_aphrophilus_NJ8700 1 1

Aggregatibacter_actinomycetemcomitans_D7S-1 1 1

Gallibacterium_anatis_UMN179 2 2

Haemophilus_parainfluenzae_T3T1 1 1

Haemophilus_influenzae_PittEE 1 1

Actinobacillus_succinogenes_130Z 2 2

Hahella_chejuensis_KCTC_2396 1 1

Marinomonas_mediterranea_MMB-1 1 1

Methylomicrobium_alcaliphilum 2 2

Methylomonas_methanica_MC09 1 1

Methylococcus_capsulatus_str._Bath 1 1

Pseudoxanthomonas_spadix_BD-a59 1 1

Xanthomonas_axonopodis_pv._citri_str._306 1 1

Xanthomonas_albilineans_GPE_PC73 1 1

Xanthomonas_oryzae_pv._oryzae_PXO99A 1 1

Halothiobacillus_neapolitanus_c2 1 1

Thioalkalivibrio_sulfidophilus_HL-EbGr7 2 2

Halorhodospira_halophila_SL1 2 2

Allochromatium_vinosum_DSM_180 2 2

Thiocystis_violascens_DSM_198 1 1

Nitrosococcus_halophilus_Nc4 4 4

Serratia_sp._ATCC_39006 1 1

Azotobacter_vinelandii_DJ 1 1

Pseudomonas_stutzeri_A1501 1 1

Francisella_philomiragia_subsp._philomiragia_ATCC_25017 1 1

Francisella_tularensis_subsp._tularensis_WY96-3418 1 1

Francisella_cf._novicida_3523 1 1

Francisella_novicida_U112 2 2

Nanoarchaeum_equitans_Kin4-M 1 1

Candidatus_Caldiarchaeum_subterraneum 1 1

Candidatus_Korarchaeum_cryptofilum_OPF8 1 1

Acidilobus_saccharovorans_345-15 1 1

Fervidicoccus_fontis_Kam940 1 1

Pyrolobus_fumarii_1A 1 1

Hyperthermus_butylicus_DSM_5456 1 1

Ignisphaera_aggregans_DSM_17230 1 1

Aeropyrum_pernix_K1 1 1

Ignicoccus_hospitalis_KIN4/I 1 1

Thermosphaera_aggregans_DSM_11486 1 1

Staphylothermus_marinus_F1 1 1

Desulfurococcus_fermentans_DSM_16532 1 1

Desulfurococcus_kamchatkensis_1221n 1 1

Desulfurococcus_mucosus_DSM_2162 1 1

Metallosphaera_cuprina_Ar-4 1 1

Metallosphaera_sedula_DSM_5348 1 1

Acidianus_hospitalis_W1 2 2

Sulfolobus_tokodaii_str._7 2 2

Sulfolobus_islandicus_Y.N.15.51 1 1

Sulfolobus_solfataricus_P2 1 1

Sulfolobus_acidocaldarius_DSM_639 2 2

Thermofilum_sp._1910b 1 1

Thermofilum_pendens_Hrk_5 1 1

Vulcanisaeta_moutnovskia_768-28 1 1

Vulcanisaeta_distributa_DSM_14429 1 1

Pyrobaculum_sp._1860 3 3

Pyrobaculum_calidifontis_JCM_11548 1 1

Pyrobaculum_arsenaticum_DSM_13514 2 2

Pyrobaculum_oguniense_TE7 2 2

Thermoproteus_neutrophilus_V24Sta 2 2

Pyrobaculum_aerophilum_str._IM2 2 2

Thermoproteus_tenax_Kra_1 1 1

halophilic_archaeon_DL31 1 1

Methanocella_conradii_HZ254 1 1

Methanosaeta_harundinacea_6Ac 1 1

Methanosaeta_thermophila_PT 2 2

Methanosaeta_concilii_GP6 2 2

Methanococcoides_burtonii_DSM_6242 1 1

Methanosarcina_acetivorans_C2A 1 1

Methanosarcina_mazei_Go1 1 1

Methanosarcina_barkeri_str._Fusaro 2 2

Methanospirillum_hungatei_JF-1 2 2

Methanocorpusculum_labreanum_Z 1 1

Methanopyrus_kandleri_AV19 1 1

Ferroglobus_placidus_DSM_10642 1 1

Archaeoglobus_veneficus_SNP6 1 1

Archaeoglobus_fulgidus_DSM_4304 2 2

Thermococcus_sp._4557 2 2

Thermococcus_onnurineus_NA1 1 1

Thermococcus_kodakarensis_KOD1 1 1

Thermococcus_gammatolerans_EJ3 1 1

Thermococcus_sibiricus_MM_739 1 1

Thermococcus_barophilus_MP 1 1

Pyrococcus_sp._ST04 2 2

Pyrococcus_yayanosii_CH1 2 2

Pyrococcus_horikoshii_OT3 2 2

Pyrococcus_furiosus_COM1 1 1

Thermoplasma_volcanium_GSS1 1 1

Picrophilus_torridus_DSM_9790 2 2

Natrinema_sp._J7-2 1 1

Halorubrum_lacusprofundi_ATCC_49239 2 2

Haloferax_mediterranei_ATCC_33500 1 1

Haloferax_volcanii_DS2 1 1

Halomicrobium_mukohataei_DSM_12286 1 1

Halorhabdus_utahensis_DSM_12940 1 1

Natronomonas_pharaonis_DSM_2160 1 1

Haloarcula_hispanica_ATCC_33960 1 1

Haloarcula_marismortui_ATCC_43049 1 1

Methanotorris_igneus_Kol_5 1 1

Methanocaldococcus_sp._FS406-22 1 1

Methanocaldococcus_fervens_AG86 1 1

Methanocaldococcus_vulcanius_M7 1 1

methanocaldococcus_infernus_ME 2 2

Methanocaldococcus_jannaschii_DSM_2661 1 1

Methanothermococcus_okinawensis_IH1 1 1

Methanococcus_aeolicus_Nankai-3 1 1

Methanococcus_maripaludis_C5 1 1

Methanococcus_voltae_A3 2 2

Methanococcus_vannielii_SB 2 2

Methanothermus_fervidus_DSM_2088 1 1

Methanothermobacter_thermautotrophicus_str._Delta_H 1 1

Methanosphaera_stadtmanae_DSM_3091 2 2

Methanobrevibacter_sp._AbM4 2 2

Methanobrevibacter_ruminantium_M1 3 3

Methanobrevibacter_smithii_ATCC_35061 2 2

Complete_genome_sequence_of_Methanobacterium_sp._Mb1 1 1

Aciduliprofundum_sp._MAR08-339 1 1

Aciduliprofundum_boonei_T469 1 1

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Strains
Genome Number Proteins

Chroococcidiopsis_thermalis_PCC_7203 1 1

Chamaesiphon_minutus_PCC_6605 1 1

Synechocystis_sp._PCC_6803 3 3

Synechococcus_sp._JA-2-3B'a(2-13) 1 1

Synechococcus_sp._JA-3-3Ab 3 3

Synechococcus_sp._PCC_7002 2 2

Crinalium_epipsammum_PCC_9333 2 2

Oscillatoria_nigro-viridis_PCC_7112 1 1

Oscillatoria_acuminata_PCC_6304 3 3

Arthrospira_platensis_NIES-39 2 2

Cyanothece_sp._PCC_7822 4 4

Cyanothece_sp._PCC_7425 3 3

Cyanothece_sp._PCC_7424 3 3

Cyanothece_sp._ATCC_51142 2 2

Cyanothece_sp._PCC_8801 1 1

Cyanobacterium_aponinum_PCC_10605 3 3

Cyanobacterium_stanieri_PCC_7202 2 2

Gloeobacter_kilaueensis_Gloeobacter_sp._JS 2 2

Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 2 2

Stanieria_cyanosphaera_PCC_7437 3 3

Calothrix_parietina_Calothrix_sp._PCC_6303 2 2

Cylindrospermum_stagnale_PCC_7417 1 1

Anabaena_cylindrica_PCC_7122 4 4

Spiroplasma_syrphidicola_EA-1 1 1

Spiroplasma_apis_B31 1 1

Mycoplasma_cynos_C142 1 1

Mycoplasma_gallisepticum_CA06_2006.052-5-2P 1 1

Mycoplasma_gallisepticum_WI01_2001.043-13-2P 1 1

Mycoplasma_gallisepticum_NY01_2001.047-5-1P 1 1

Mycoplasma_gallisepticum_NC96_1596-4-2P 1 1

Mycoplasma_gallisepticum_NC95_13295-2-2P 1 1

Mycoplasma_gallisepticum_VA94_7994-1-7P 1 1

Mycoplasma_gallisepticum_S6 1 1

Mycoplasma_gallisepticum_str._R(high) 1 1

Mycoplasma_gallisepticum_str._R(low) 1 1

Gordonibacter_pamelaeae_7-10-1-b 1 1

Frankia_sp._CcI3 1 1

Saccharothrix_espanaensis_DSM_44229 1 1

Mycobacterium_canettii_CIPT_140070017 1 1

Mycobacterium_canettii_CIPT_140060008 1 1

Mycobacterium_canettii_CIPT_140070008 1 1

Mycobacterium_canettii_CIPT_140070010 2 2

Mycobacterium_tuberculosis_EAI5/NITR206 1 1

Mycobacterium_tuberculosis_EAI5 1 1

Mycobacterium_tuberculosis_CAS/NITR204 1 1

Mycobacterium_tuberculosis_UT205 1 1

Mycobacterium_tuberculosis_RGTB423 1 1

Mycobacterium_tuberculosis_RGTB327 1 1

Mycobacterium_tuberculosis_CTRI-2 1 1

Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 1 1

Mycobacterium_tuberculosis_KZN_605 1 1

Mycobacterium_tuberculosis_KZN_4207 1 1

Mycobacterium_tuberculosis_H37Ra 1 1

Mycobacterium_tuberculosis_str._Haarlem 1 1

Mycobacterium_tuberculosis_F11 1 1

Mycobacterium_tuberculosis_H37Rv 1 1

Mycobacterium_tuberculosis_CDC1551 1 1

Mycobacterium_bovis_AF2122/97 1 1

Mycobacterium_bovis_BCG_str._Korea_1168P 1 1

Mycobacterium_bovis_BCG_str._Mexico 1 1

Mycobacterium_bovis_BCG_str._Tokyo_172 1 1

Corynebacterium_ulcerans_BR-AD22 1 1

Corynebacterium_ulcerans_809 1 1

Corynebacterium_diphtheriae_BH8 1 1

Corynebacterium_diphtheriae_VA01 1 1

Corynebacterium_diphtheriae_HC02 1 1

Corynebacterium_diphtheriae_HC01 1 1

Corynebacterium_diphtheriae_241 1 1

Corynebacterium_diphtheriae_C7_(beta) 1 1

Corynebacterium_diphtheriae_31A 1 1

Bifidobacterium_longum_DJO10A 1 1

Bifidobacterium_thermophilum_RBL67 1 1

Bifidobacterium_animalis_subsp._lactis_Bl12 1 1

Bifidobacterium_animalis_subsp._lactis_B420 1 1

Bifidobacterium_animalis_subsp._lactis_BLC1 1 1

Bifidobacterium_animalis_subsp._lactis_Bi-07 1 1

Bifidobacterium_animalis_subsp._lactis_V9 1 1

Bifidobacterium_animalis_subsp._lactis_DSM_10140 1 1

Bifidobacterium_breve_UCC2003 1 1

Actinomyces_graevenitzii_C83_ 1 1

Actinomyces_viscosus_C505 1 1

Dehalococcoides_mccartyi_DCMB5 1 1

Thermus_oshimai_JL-2 1 1

Thermus_thermophilus_JL-18 1 1

Thermus_thermophilus_SG0.5JP17-16 2 2

Thermus_thermophilus_HB8 1 1

Eubacterium_siraeum_V10Sc8a 1 1

Clostridium_thermocellum_DSM_1313 2 2

[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 1 1

Faecalibacterium_prausnitzii_L2-6 1 1

Ruminococcus_champanellensis_18P13 1 1

Sulfobacillus_acidophilus_TPY 1 1

Clostridium_acidurici_9a 1 1

Desulfitobacterium_hafniense_DCB-2 2 2

Desulfotomaculum_gibsoniae_DSM_7213 3 3

Clostridium_difficile_BI1 1 1

Clostridium_difficile_R20291 1 1

Clostridium_difficile_CD196 1 1

Roseburia_intestinalis_XB6B4 1 1

Candidatus_Arthromitus_sp._SFB-rat-Yit 1 1

Candidatus_Arthromitus_sp._SFB-mouse-Yit 1 1

Clostridium_saccharobutylicum_DSM_13864 1 1

Clostridium_autoethanogenum_DSM_10061 1 1

Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 1 1

Clostridium_kluyveri_NBRC_12016 1 1

Clostridium_tetani_genome_12124569 2 2

Clostridium_perfringens_SM101 1 1

Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 1 1

Thermoanaerobacterium_thermosaccharolyticum_M0795 1 1

Thermacetogenium_phaeum_DSM_12270 2 2

Thermoanaerobacter_sp._X513 1 1

Halobacteroides_halobius_DSM_5150 1 1

Melissococcus_plutonius_ATCC_35311 1 1

Enterococcus_mundtii_QU_25 1 1

Enterococcus_faecium_DO 1 1

Enterococcus_faecalis_D32 1 1

Enterococcus_faecalis_OG1RF 1 1

Leuconostoc_gelidum_JB7 1 1

Lactobacillus_paracasei_subsp._paracasei_8700:2 1 1

Lactobacillus_casei_W56 1 1

Lactobacillus_casei_LC2W 1 1

Lactobacillus_casei_BD-II 1 1

Lactobacillus_casei_BL23 1 1

Lactobacillus_casei_str._Zhang 1 1

Lactobacillus_rhamnosus_LOCK900 1 1

Lactobacillus_rhamnosus_GG 1 1

Lactobacillus_rhamnosus_GG 1 1

Lactobacillus_salivarius_UCC118 1 1

Lactobacillus_reuteri_TD1 1 1

Lactobacillus_plantarum_ZJ316 1 1

Lactobacillus_helveticus_R0052 1 1

Lactobacillus_helveticus_H10 1 1

Pediococcus_pentosaceus_SL4 1 1

Streptococcus_intermedius_B196 1 1

Streptococcus_anginosus_C1051 2 2

Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_BAA-2069 1 1

Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_43143 2 2

Streptococcus_lutetiensis_033 1 1

Streptococcus_equi_subsp._zooepidemicus_ATCC_35246 1 1

Streptococcus_equi_subsp._zooepidemicus_MGCS10565 2 2

Streptococcus_equi_subsp._zooepidemicus 1 1

Streptococcus_dysgalactiae_subsp._equisimilis_AC-2713 2 2

Streptococcus_dysgalactiae_subsp._equisimilis_ATCC_12394 2 2

Streptococcus_dysgalactiae_subsp._equisimilis_RE378 2 2

Streptococcus_oligofermentans_AS_1.3089 2 2

Streptococcus_pyogenes_A20 2 2

Streptococcus_pyogenes_MGAS1882 1 1

Streptococcus_pyogenes_MGAS15252 1 1

Streptococcus_pyogenes_MGAS10750 2 2

Streptococcus_pyogenes_MGAS10270 2 2

Streptococcus_pyogenes_MGAS2096 2 2

Streptococcus_pyogenes_MGAS9429 2 2

Streptococcus_pyogenes_MGAS6180 2 2

Streptococcus_pyogenes_NZ131 2 2

Streptococcus_pyogenes_MGAS315 1 1

Streptococcus_pyogenes_SSI-1 1 1

Streptococcus_pyogenes_M1_476 2 2

Streptococcus_pyogenes_MGAS5005 2 2

Streptococcus_pyogenes_M1_GAS 2 2

Streptococcus_agalactiae_ILRI112 2 2

Streptococcus_agalactiae_ILRI005 2 2

Streptococcus_agalactiae_09mas018883 1 1

Streptococcus_agalactiae_2-22 2 2

Streptococcus_agalactiae_SA20-06 2 2

Streptococcus_agalactiae_GD201008-001 1 1

Streptococcus_agalactiae_NEM316 1 1

Streptococcus_agalactiae_2603V/R 1 1

Streptococcus_mutans_GS-5 2 2

Streptococcus_mutans_LJ23 2 2

Streptococcus_mutans_UA159 2 2

Streptococcus_thermophilus_MN-ZLW-002 1 1

Streptococcus_thermophilus_JIM_8232 2 2

Streptococcus_thermophilus_ND03 1 1

Streptococcus_thermophilus_CNRZ1066 2 2

Streptococcus_thermophilus_LMG_18311 2 2

Streptococcus_suis_ST3 1 1

Streptococcus_suis_D9 1 1

Streptococcus_suis_ST1 1 1

Streptococcus_salivarius_JIM8777 1 1

Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 1 1

Thermobacillus_composti_KWC4 1 1

Paenibacillus_polymyxa_CR1 2 2

Listeria_monocytogenes_EGD_sequence 1 1

Listeria_monocytogenes_M7 1 1

Listeria_monocytogenes_SLCC5850 1 1

Listeria_monocytogenes_SLCC2540 1 1

Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 2 2

Listeria_monocytogenes_serotype_7_str._SLCC2482 2 2

Listeria_monocytogenes_L99 1 1

Listeria_monocytogenes_HCC23 1 1

Listeria_monocytogenes_10403S 1 1

Listeria_monocytogenes_J0161 2 2

Listeria_monocytogenes_Finland_1998 1 1

Geobacillus_sp._C56-T3 1 1

Geobacillus_sp._Y4.1MC1 2 2

Geobacillus_sp._Y412MC52 1 1

Geobacillus_sp._Y412MC61 1 1

Bacillus_cereus_subsp._cytotoxis_NVH_391-98 1 1

Bacillus_coagulans_36D1 1 1

Staphylococcus_aureus_subsp._aureus_MSHR1132 1 1

Staphylococcus_pseudintermedius_ED99 1 1

Staphylococcus_pasteuri_SP1 1 1

Staphylococcus_lugdunensis_N920143 2 2

Staphylococcus_aureus_08BA02176 1 1

Chlorobium_phaeobacteroides_BS1 1 1

Rhodothermus_marinus_SG0.5JP17-172 2 2

Prevotella_dentalis_DSM_3688 1 1

Porphyromonas_gingivalis_TDC60 2 2

Porphyromonas_gingivalis_W83 2 2

Bacteroides_fragilis_NCTC_9343 2 2

Psychroflexus_torquis_ATCC_700755 1 1

Riemerella_anatipestifer_RA-CH-2 1 1

Riemerella_anatipestifer_RA-CH-1 1 1

Riemerella_anatipestifer_RA-GD 1 1

Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 1 1

Fibrobacter_succinogenes_subsp._succinogenes_S85 2 2

Singulisphaera_acidiphila_DSM_18658 2 2

Leptospira_interrogans_serovar_Lai_str._56601 1 1

Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 2 2

Treponema_pedis_str._T_A4 1 1

Spirochaeta_thermophila_DSM_6578 2 2

Thermotoga_maritima_MSB8 1 1

Hydrogenobacter_thermophilus_TK-6 1 1

Fusobacterium_nucleatum_subsp._vincentii_3_1_36A2 1 1

Fusobacterium_nucleatum_subsp._animalis_4_8 1 1

Bdellovibrio_exovorus_JSS 1 1

Campylobacter_jejuni_Waterborne_C.jejuni_Outbreak 1 1

Campylobacter_jejuni_RM1221 1 1

Campylobacter_jejuni_subsp._jejuni_00-2544 1 1

Campylobacter_jejuni_subsp._jejuni_00-2538 1 1

Campylobacter_jejuni_subsp._jejuni_00-2426 1 1

Campylobacter_jejuni_subsp._jejuni_00-2425 1 1

Campylobacter_jejuni_subsp._jejuni_PT14 1 1

Campylobacter_jejuni_subsp._jejuni_ICDCCJ07001 1 1

Campylobacter_jejuni_subsp._jejuni_S3 1 1

Campylobacter_jejuni_subsp._jejuni_M1 1 1

Campylobacter_jejuni_subsp._jejuni_IA3902 1 1

Campylobacter_jejuni_subsp._jejuni_81116 1 1

Campylobacter_jejuni_subsp._jejuni_NCTC_11168-BN148 1 1

Campylobacter_jejuni_subsp._jejuni_NCTC_11168_=_ATCC_700819 1 1

Helicobacter_pylori_UM037 1 1

Helicobacter_pylori_OK310 1 1

Helicobacter_pylori_OK113 1 1

Helicobacter_pylori_Rif2 1 1

Helicobacter_pylori_Rif1 1 1

Helicobacter_pylori_PeCan18 1 1

Helicobacter_pylori_Shi169 1 1

Helicobacter_pylori_Shi417 1 1

Helicobacter_pylori_XZ274 1 1

Helicobacter_pylori_Aklavik86 1 1

Helicobacter_pylori_Aklavik117 1 1

Helicobacter_pylori_Puno135 1 1

Helicobacter_pylori_Puno120 1 1

Helicobacter_pylori_SouthAfrica7 1 1

Helicobacter_pylori_F30 1 1

Helicobacter_pylori_Sat464 1 1

Helicobacter_pylori_Cuz20 1 1

Helicobacter_pylori_PeCan4 1 1

Helicobacter_pylori_B8 1 1

Helicobacter_pylori_52 1 1

Helicobacter_pylori_v225d 1 1

Helicobacter_pylori_83 1 1

Helicobacter_pylori_P12 1 1

Helicobacter_pylori_Shi470 1 1

Helicobacter_pylori_F32 1 1

Helicobacter_pylori_26695 1 1

Helicobacter_pylori_26695 1 1

Desulfocapsa_sulfexigens_DSM_10523 1 1

Desulfobacula_toluolica_Tol2 2 2

Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 2 2

Desulfovibrio_vulgaris_RCH1 1 1

Desulfovibrio_vulgaris_str._'Miyazaki_F' 1 1

Desulfovibrio_vulgaris_str._Hildenborough 1 1

Desulfovibrio_desulfuricans_ND132 1 1

Geobacter_sulfurreducens_PCA 1 1

Sorangium_cellulosum_So0157-2 1 1

Myxococcus_stipitatus_DSM_14675 2 2

Neisseria_meningitidis_WUE_2594 1 1

Neisseria_meningitidis_M01-240355 1 1

Neisseria_meningitidis_8013 1 1

Neisseria_meningitidis_053442 1 1

Neisseria_meningitidis_Z2491 1 1

Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 2 2

Alicycliphilus_denitrificans_BC 1 1

Taylorella_equigenitalis_ATCC_35865 1 1

Nitrosomonas_sp._AL212 2 2

Zymomonas_mobilis_subsp._pomaceae_ATCC_29192 1 1

Rhodobacter_sphaeroides_KD131 1 1

Rhodospirillum_rubrum_ATCC_11170 4 4

Gluconacetobacter_diazotrophicus_PAl_5 2 2

Methylobacterium_extorquens_DM4 1 1

Hyphomicrobium_nitrativorans_NL23 1 1

Rhodopseudomonas_palustris_DX-1 1 1

Rhodopseudomonas_palustris_BisB18 1 1

Mannheimia_succiniciproducens_MBEL55E 3 3

Bibersteinia_trehalosi_USDA-ARS-USMARC-192 2 2

Aggregatibacter_actinomycetemcomitans_ANH9381 1 1

Aggregatibacter_actinomycetemcomitans_D11S-1 1 1

Mannheimia_haemolytica_USMARC_2286 1 1

Mannheimia_haemolytica_M42548 1 1

Mannheimia_haemolytica_D174 1 1

Mannheimia_haemolytica_D171 1 1

Mannheimia_haemolytica_D153 1 1

Mannheimia_haemolytica_USDA-ARS-USMARC-183 1 1

Mannheimia_haemolytica_USDA-ARS-USMARC-185 1 1

Pasteurella_multocida_subsp._multocida_str._Pm70 1 1

Haemophilus_influenzae_F3047 1 1

Actinobacillus_suis_H91-0380 1 1

Vibrio_vulnificus_YJ016 2 2

Thalassolituus_oleivorans_MIL-1 1 1

Xanthomonas_axonopodis_Xac29-1 1 1

Xanthomonas_oryzae_pv._oryzae_MAFF_311018 1 1

Xanthomonas_oryzae_pv._oryzae_KACC_10331 1 1

Thioalkalivibrio_nitratireducens_DSM_14787 2 2

Thioflavicoccus_mobilis_8321 3 3

Legionella_pneumophila_str._Paris 1 1

Dickeya_dadantii_Ech586 1 1

Dickeya_dadantii_3937 1 1

Azotobacter_vinelandii_CA6 1 1

Azotobacter_vinelandii_CA 1 1

Acinetobacter_junii__SH205 1 1

Francisella_tularensis_subsp._mediasiatica_FSC147 1 1

Francisella_tularensis_subsp._holarctica_F92 1 1

Francisella_tularensis_subsp._holarctica_FTNF002-00 1 1

Francisella_tularensis_subsp._holarctica_OSU18 1 1

Francisella_tularensis_subsp._holarctica_LVS 1 1

Francisella_tularensis_subsp._holarctica_FSC200 1 1

Francisella_cf._novicida_Fx1 1 1

Candidatus_Nitrososphaera_gargensis_Ga9.2 1 1

Aeropyrum_camini_SY1_=_JCM_12091 2 2

Sulfolobus_islandicus_LAL14/1 1 1

Sulfolobus_islandicus_REY15A 1 1

Sulfolobus_islandicus_HVE10/4 1 1

Sulfolobus_islandicus_Y.G.57.14 1 1

Sulfolobus_islandicus_L.S.2.15 2 2

Sulfolobus_islandicus_M.16.27 2 2

Sulfolobus_islandicus_M.14.25 2 2

Sulfolobus_islandicus_M.16.4 1 1

Sulfolobus_islandicus_L.D.8.5 1 1

Sulfolobus_solfataricus_98/2 2 2

Sulfolobus_acidocaldarius_SUSAZ 1 1

Sulfolobus_acidocaldarius_Ron12/I 1 1

Sulfolobus_acidocaldarius_N8 2 2

Methanomethylovorans_hollandica_DSM_15978 1 1

Methanosarcina_mazei_Tuc01 1 1

Methanoregula_formicica_Methanoregula_formicicum_SMSP 2 2

Archaeoglobus_sulfaticallidus_PM70-1 1 1

Thermococcus_sp._AM4 1 1

Thermococcus_sp._CL1 3 3

Thermococcus_litoralis_DSM_5473 1 1

Pyrococcus_sp._NA2 1 1

Pyrococcus_furiosus_DSM_3638 1 1

Candidatus_Methanomethylophilus_alvus_Mx1201 1 1

Candidatus_Methanomassiliicoccus_intestinalis_Issoire-Mx1 1 1

Ferroplasma_acidarmanus_fer1 2 2

Natronobacterium_gregoryi_SP2 1 1

Haloquadratum_walsbyi_C23 2 2

Halorhabdus_tiamatea_SARL4B 1 1

Haloarcula_hispanica_N601 1 1

Methanococcus_maripaludis_X1 1 1

Methanobacterium_sp._SWAN-1 1 1

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Others
Genome Number Proteins

Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 1 1

NCBI_plasmid_sequences_(Plasmids) 58 58

NCBI_viral_sequences_(Viral) 1 1

PDB_chains_(SCOP_1.75)_(PDB) 4 4

TargetDB__(Targets) 36 36

SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 53 53

Protein_Data_Bank_(all_PDB_sequenc) 68 68

STRING_v9.0.5_(STRING) 434 434

Uniprot_2018_03_genome 8772 8768

NCBI_2017_08_genome 20770 20765

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