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Home > SCOP hierarchy > Heme iron utilization protein-like > Domain combinations

Domain combinations for Heme iron utilization protein-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Heme iron utilization protein-like domain in that genome.

Complete genomes
Genome Number Proteins

Capitella_sp._I_ 1 1

Apis_mellifera_38.2d_(Not_maintained) (Honey bee) 1 1

Caenorhabditis_japonica_ 1 1

Chlamydomonas_reinhardtii_4.0 1 1

Cyanidioschyzon_merolae_strain_10D_22 1 1

Cyanidioschyzon_merolae 1 1

Porphyridium_purpureum_02_2012 1 1

Ectocarpus_siliculosus 1 1

Guillardia_theta_CCMP2712_v1.0_ 1 1

Emiliania_huxleyi_CCMP1516_ 1 1

Pseudanabaena_sp._PCC_7367 1 1

Thermosynechococcus_sp._NK55 1 1

Thermosynechococcus_elongatus_BP-1 1 1

Synechococcus_sp._PCC_7502 1 1

Synechococcus_sp._PCC_6312 1 1

Microcoleus_sp._PCC_7113 1 1

Trichodesmium_erythraeum_IMS101 1 1

Gloeocapsa_sp._PCC_7428 1 1

Gloeobacter_violaceus_PCC_7421 1 1

Anabaena_variabilis_ATCC_29413 1 1

'Nostoc_azollae'_0708 1 1

Nostoc_sp._PCC_7107 1 1

Nostoc_punctiforme_PCC_73102 1 1

Nostoc_sp._PCC_7120 1 1

Nostoc_sp._PCC_7524 1 1

Anabaena_sp._90 1 1

Segniliparus_rotundus_DSM_44985 1 1

Gordonia_sp._KTR9 1 1

Gordonia_polyisoprenivorans_VH2 1 1

Gordonia_bronchialis_DSM_43247 1 1

Rhodococcus_erythropolis_PR4 1 1

Mycobacterium_abscessus_ATCC_19977 1 1

Saprospira_grandis_str._Lewin 1 1

Chitinophaga_pinensis_DSM_2588 1 1

Salinibacter_ruber_M8 1 1

Belliella_baltica_DSM_15883 1 1

Cyclobacterium_marinum_DSM_745 1 1

Fibrella_aestuarina 1 1

Leadbetterella_byssophila_DSM_17132 1 1

Dyadobacter_fermentans_DSM_18053 1 1

Cytophaga_hutchinsonii_ATCC_33406 1 1

Fluviicola_taffensis_DSM_16823 1 1

Zunongwangia_profunda_SM-A87 1 1

Weeksella_virosa_DSM_16922 1 1

Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 1 1

Desulfurispirillum_indicum_S5 1 1

Denitrovibrio_acetiphilus_DSM_12809 1 1

Candidatus_Chloracidobacterium_thermophilum_B 1 1

Candidatus_Nitrospira_defluvii 1 1

Leptospirillum_ferrooxidans_C2-3 1 1

Campylobacter_curvus_525.92 1 1

Stigmatella_aurantiaca_DW4/3-1 1 1

Corallococcus_coralloides_DSM_2259 1 1

Myxococcus_xanthus_DK_1622 1 1

Myxococcus_fulvus_HW-1 1 1

Laribacter_hongkongensis_HLHK9 2 2

Chromobacterium_violaceum_ATCC_12472 1 1

Rubrivivax_gelatinosus_IL144 1 1

Cupriavidus_metallidurans_CH34 1 1

Burkholderia_thailandensis_E264 1 1

Burkholderia_pseudomallei_1106a 1 1

Burkholderia_mallei_SAVP1 1 1

Burkholderia_ambifaria_AMMD 1 1

Burkholderia_cenocepacia_HI2424 1 1

Burkholderia_multivorans_ATCC_17616 1 1

Burkholderia_gladioli_BSR3 1 1

Verminephrobacter_eiseniae_EF01-2 1 1

Delftia_sp._Cs1-4 1 1

Delftia_acidovorans_SPH-1 1 1

Comamonas_testosteroni_CNB-2 1 1

Janthinobacterium_sp._Marseille 1 1

Herbaspirillum_seropedicae_SmR1 1 1

Advenella_kashmirensis_WT001 1 1

Bordetella_avium_197N 1 1

Bordetella_pertussis_Tohama_I 1 1

Bordetella_parapertussis_12822 1 1

Bordetella_bronchiseptica_RB50 1 1

Achromobacter_xylosoxidans_A8 1 1

Achromobacter_xylosoxidans 1 1

Methylovorus_sp._MP688 1 1

Methylovorus_glucosetrophus_SIP3-4 1 1

Methylobacillus_flagellatus_KT 1 1

Dinoroseobacter_shibae_DFL_12 1 1

Pseudovibrio_sp._FO-BEG1 1 1

Jannaschia_sp._CCS1 1 1

Ruegeria_sp._TM1040 1 1

Ketogulonicigenium_vulgare_Y25 2 2

Ketogulonigenium_vulgarum_WSH-001 1 1

Roseobacter_denitrificans_OCh_114 1 1

Rhodobacter_sphaeroides_ATCC_17029 1 1

Rhodobacter_capsulatus_SB_1003 3 3

Paracoccus_denitrificans_PD1222 1 1

Rhodospirillum_photometricum_DSM_122 1 1

Tistrella_mobilis_KA081020-065 1 1

Rhodospirillum_centenum_SW 2 2

Azospirillum_lipoferum_4B 2 2

Azospirillum_brasilense_Sp245 2 2

Polymorphum_gilvum_SL003B-26A1 1 1

Parvibaculum_lavamentivorans_DS-1 1 1

Ochrobactrum_anthropi_ATCC_49188 1 1

Sinorhizobium_fredii_NGR234 1 1

Sinorhizobium_medicae_WSM419 1 1

Sinorhizobium_meliloti_AK83 1 1

Genome_sequence_of_Rhizobium_sp._strain_IRBG74 1 1

Rhizobium_etli_CIAT_652 1 1

Rhizobium_leguminosarum_bv._viciae_3841 1 1

Agrobacterium_tumefaciens_str._C58 1 1

Agrobacterium_radiobacter_K84 1 1

Agrobacterium_sp._H13-3 1 1

Agrobacterium_vitis_S4 1 1

Mesorhizobium_opportunistum_WSM2075 2 2

Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 2 2

Mesorhizobium_loti_MAFF303099 1 1

Rhodomicrobium_vannielii_ATCC_17100 2 2

Hyphomicrobium_sp._MC1 1 1

Hyphomicrobium_denitrificans_ATCC_51888 2 2

Oligotropha_carboxidovorans_OM4 1 1

Rhodopseudomonas_palustris_BisA53 1 1

Nitrobacter_winogradskyi_Nb-255 1 1

Bradyrhizobium_japonicum_USDA_110 1 1

Bartonella_tribocorum_CIP_105476 1 1

Bartonella_clarridgeiae_73 1 1

Bartonella_henselae_str._Houston-1 1 1

Bartonella_grahamii_as4aup 1 1

Bartonella_quintana_str._Toulouse 1 1

Bartonella_bacilliformis_KC583 1 1

Haemophilus_somnus_129PT 1 1

Gallibacterium_anatis_UMN179 1 1

Pasteurella_multocida_subsp._multocida_str._3480 1 1

Haemophilus_parasuis_SH0165 1 1

Haemophilus_ducreyi_35000HP 1 1

Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 1 1

Aeromonas_veronii_B565 1 1

Aeromonas_salmonicida_subsp._salmonicida_A449 1 1

Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 1 1

Aliivibrio_salmonicida_LFI1238 1 1

Vibrio_fischeri_MJ11 1 1

Vibrio_sp._Ex25 1 1

Vibrio_harveyi_ATCC_BAA-1116 1 1

Vibrio_parahaemolyticus_RIMD_2210633 1 1

Vibrio_splendidus_LGP32 1 1

Vibrio_anguillarum_775 1 1

Vibrio_furnissii_NCTC_11218 1 1

Vibrio_vulnificus_MO6-24/O 1 1

Vibrio_cholerae_O395 1 1

Photobacterium_profundum_SS9 1 1

Ferrimonas_balearica_DSM_9799 2 2

Shewanella_piezotolerans_WP3 1 1

Shewanella_halifaxensis_HAW-EB4 1 1

Shewanella_denitrificans_OS217 1 1

Shewanella_pealeana_ATCC_700345 1 1

Shewanella_oneidensis_MR-1 1 1

Shewanella_baltica_OS185 1 1

Shewanella_woodyi_ATCC_51908 1 1

Shewanella_violacea_DSS12 1 1

Shewanella_putrefaciens_CN-32 1 1

Pseudoalteromonas_haloplanktis_TAC125 1 1

Marinobacter_adhaerens_HP15 1 1

Hahella_chejuensis_KCTC_2396 1 1

Alcanivorax_borkumensis_SK2 1 1

Marinomonas_sp._MWYL1 1 1

Marinomonas_mediterranea_MMB-1 1 1

Halomonas_elongata_DSM_2581 1 1

Methylomicrobium_alcaliphilum 2 2

Methylomonas_methanica_MC09 1 1

Methylococcus_capsulatus_str._Bath 2 2

Rhodanobacter_denitrificans 1 1

Frateuria_aurantia_DSM_6220 2 2

Stenotrophomonas_maltophilia_K279a 1 1

Xanthomonas_axonopodis_pv._citri_str._306 1 1

Xanthomonas_oryzae_pv._oryzae_PXO99A 1 1

Xanthomonas_campestris_pv._campestris_str._B100 1 1

Halorhodospira_halophila_SL1 1 1

Allochromatium_vinosum_DSM_180 2 2

Thiocystis_violascens_DSM_198 2 2

Nitrosococcus_watsonii_C-113 1 1

Nitrosococcus_halophilus_Nc4 1 1

Nitrosococcus_oceani_ATCC_19707 1 1

Photorhabdus_asymbiotica 1 1

Photorhabdus_luminescens_subsp._laumondii_TTO1 1 1

Xenorhabdus_bovienii_SS-2004 1 1

Xenorhabdus_nematophila_ATCC_19061 1 1

Providencia_stuartii_MRSN_2154 1 1

Proteus_mirabilis_HI4320 1 1

Edwardsiella_ictaluri_93-146 2 2

Edwardsiella_tarda_EIB202 2 2

Rahnella_sp._Y9602 2 2

Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 1 1

Yersinia_pseudotuberculosis_IP_31758 2 2

Yersinia_pestis_Pestoides_F 2 2

Yersinia_enterocolitica_subsp._enterocolitica_8081 3 3

Serratia_sp._AS12 1 1

Serratia_plymuthica_AS9 1 1

Serratia_proteamaculans_568 1 1

Dickeya_dadantii_Ech703 1 1

Dickeya_zeae_Ech1591 2 2

Pectobacterium_wasabiae_WPP163 2 2

Pectobacterium_sp._SCC3193 2 2

Pectobacterium_atrosepticum_SCRI1043 2 2

Pectobacterium_carotovorum_subsp._carotovorum_PC1 2 2

Sodalis_glossinidius_str._'morsitans' 1 1

Pantoea_sp._At-9b 1 1

Pantoea_vagans_C9-1 1 1

Erwinia_tasmaniensis_Et1/99 1 1

Erwinia_sp._Ejp617 1 1

Erwinia_billingiae_Eb661 1 1

Erwinia_pyrifoliae_Ep1/96 1 1

Erwinia_amylovora_ATCC_49946 1 1

Candidatus_Hamiltonella_defensa_5AT_(Acyrthosiphon_pisum) 1 1

Enterobacteriaceae_bacterium_strain_FGI_57 2 2

Shigella_dysenteriae_Sd197 2 2

Salmonella_bongori_NCTC_12419 1 1

Klebsiella_oxytoca_E718 1 1

Klebsiella_variicola_At-22 1 1

Klebsiella_pneumoniae_NTUH-K2044 1 1

Enterobacter_aerogenes_KCTC_2190 1 1

Enterobacter_sp._638 1 1

Enterobacter_asburiae_LF7a 1 1

Enterobacter_cloacae_subsp._dissolvens_SDM 1 1

Citrobacter_koseri_ATCC_BAA-895 2 2

Pseudomonas_aeruginosa_UCBPP-PA14 1 1

Psychrobacter_sp._G 1 1

Psychrobacter_sp._PRwf-1 1 1

Cenarchaeum_symbiosum_A 1 1

Candidatus_Nitrosopumilus_sp._AR2 1 1

Nitrosopumilus_maritimus_SCM1 1 1

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Others
Genome Number Proteins

Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 1 1

NCBI_plasmid_sequences_(Plasmids) 18 18

Protein_Data_Bank_(all_PDB_sequenc) 25 25

PDB_chains_(SCOP_1.75)_(PDB) 5 5

SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 87 87

STRING_v9.0.5_(STRING) 234 234

Uniprot_2018_03_genome 4737 4731

NCBI_2017_08_genome 26430 26423

TargetDB__(Targets) 17 17

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Domain combinations for Heme iron utilization protein-like superfamily in groups of genomes