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Domain combinations for Sec2 N-terminal region superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Sec2 N-terminal region domain in that genome.

Complete genomes
Genome Number Proteins

Homo_sapiens_76_38 (Human) 15 15

Pan_troglodytes_76_2.1.4 (Chimpanzee) 2 2

Gorilla_gorilla_76_3.1 (Western gorilla) 5 5

Pongo_abelii_76_2 (Sumatran orangutan) 2 2

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 3 3

Papio_anubis_76 (Olive baboon) 2 2

Macaca_mulatta_76_1 (Rhesus monkey) 7 7

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 9 9

Otolemur_garnettii_76_3 (Small-eared galago) 3 3

Microcebus_murinus_76_1 (Gray mouse lemur) 1 1

Rattus_norvegicus_76_5.0 (Norway rat) 3 3

Mus_musculus_76_38 (House mouse) 9 9

Ictidomys_tridecemlineatus_76_2 (Thirteen-lined ground squirrel) 3 3

Heterocephalus_glaber_v1.7-2 (Naked mole-rat) 2 2

Cavia_porcellus_76_3 (Domestic guinea pig) 3 3

Oryctolagus_cuniculus_76_2 (Rabbit) 2 2

Ochotona_princeps_76 (American pika) 2 2

Tupaia_belangeri_76 (Northern tree shrew) 2 2

Sus_scrofa_76_10.2 (Pig) 2 2

Bos_taurus_76_3.1 (Cattle) 3 3

Ovis_aries_76_3.1 (Sheep) 2 2

Vicugna_pacos_76_1 (Alpaca) 1 1

Tursiops_truncatus_76_1 (Bottlenose dolphin) 2 2

Mustela_putorius_furo_76_1.0 (Domestic ferret) 2 2

Ailuropoda_melanoleuca_76_1 (Giant panda) 3 3

Canis_familiaris_76_3.1 (Dog) 2 2

Felis_catus_76_6.2 (Domestic cat) 2 2

Equus_caballus_76_2 (Horse) 2 2

Myotis_lucifugus_76_2.0 (Little brown bat) 1 1

Pteropus_vampyrus_76_1 (Large flying fox) 2 2

Sorex_araneus_76_1 (European shrew) 1 1

Erinaceus_europaeus_76 (Western European hedgehog) 2 2

Procavia_capensis_76_1 (Cape rock hyrax) 2 2

Loxodonta_africana_76_3 (African savanna elephant) 3 3

Echinops_telfairi_76 (Small Madagascar hedgehog) 2 2

Dasypus_novemcinctus_76_2 (Nine-banded armadillo) 2 2

Choloepus_hoffmanni_76_1 (Hoffmann's two-fingered sloth) 1 1

Macropus_eugenii_76_1.0 (Tammar wallaby) 2 2

Sarcophilus_harrisii_76_7.0 (Tasmanian devil) 2 2

Monodelphis_domestica_76_5 (Gray short-tailed opossum) 1 1

Ornithorhynchus_anatinus_76_5 (Platypus) 2 2

Saccoglossus_kowalevskii_v3.0 1 1

Petromyzon_marinus_76_7.0 (Sea lamprey) 1 1

Meleagris_gallopavo_76_2 (Turkey) 2 2

Gallus_gallus_76_4 (Chicken) 2 2

Anas_platyrhynchos_76_1.0 (Mallard) 2 2

Taeniopygia_guttata_76_3.2.4 (Zebra finch) 2 2

Ficedula_albicollis_76_1.0 (Collared flycatcher) 2 2

Pelodiscus_sinensis_76_1.0 (Chinese soft-shelled turtle) 2 2

Anolis_carolinensis_76_2.0 (Green anole) 2 2

Xenopus_laevis_ (African clawed frog) 4 4

Xenopus_tropicalis_76_4.2 (Tropical clawed frog) 3 3

Latimeria_chalumnae_76_1 (Coelacanth) 1 1

Lepisosteus_oculatus_76 (Spotted gar) 3 3

Gadus_morhua_76_1 (Atlantic cod) 2 2

Tetraodon_nigroviridis_76_8 (Spotted green pufferfish) 2 2

Takifugu_rubripes_76_4 (Torafugu) 6 6

Gasterosteus_aculeatus_76_1 (Three-spined stickleback) 3 3

Oryzias_latipes_76_1 (Japanese medaka) 3 3

Xiphophorus_maculatus_76_4.4.2 (Southern platyfish) 2 2

Poecilia_formosa_76 (Amazon molly) 2 2

Oreochromis_niloticus_76_1.0 (Nile tilapia) 3 3

Astyanax_mexicanus_76 (Mexican tetra) 2 2

Danio_rerio_76_9 (Zebrafish) 2 2

Ciona_savignyi_76_2.0 (Pacific transparent sea squirt) 2 2

Ciona_intestinalis_76 (Vase tunicate) 2 2

Strongylocentrotus_purpuratus_v3.1 (Purple sea urchin) 1 1

Adineta_vaga 4 4

Crassostrea_gigas_22 (Pacific oyster) 2 2

Lottia_gigantea_ (Owl limpet) 2 2

Helobdella_robusta_ 1 1

Capitella_sp._I_ 2 2

Nasonia_vitripennis_ (Jewel wasp) 1 1

Harpegnathos_saltator_v3.3 (Jerdon's jumping ant) 1 1

Linepithema_humile_v1.1 (Argentine ant) 1 1

Pogonomyrmex_barbatus_v1.2 (Red harvester ant) 1 1

Acromyrmex_echinatior_v3.8 (Panamanian leafcutter ant) 1 1

Atta_cephalotes_v1.1 1 1

Camponotus_floridanus_v3.3 (Florida carpenter ant) 1 1

Tribolium_castaneum_3.0 (Red flour beetle) 1 1

Pediculus_humanus_corporis__(Early_assembly) (Human body louse) 1 1

Acyrthosiphon_pisum_ (Pea aphid) 1 1

Rhodnius_prolixus_22 1 1

Daphnia_pulex_ (Common water flea) 1 1

Sarcoptes_scabiei 1 1

Tetranychus_urticae_ (Two-spotted spider mite) 2 2

Ixodes_scapularis__(Preliminary) (Black-legged tick) 1 1

Pristionchus_pacificus_ 2 2

Onchocerca_volvulus_22 1 1

Brugia_malayi_WS250 (Agent of lymphatic filariasis) 1 1

Caenorhabditis_japonica_ 1 1

Caenorhabditis_brenneri_ 2 2

Caenorhabditis_remanei_ 1 1

Caenorhabditis_elegans_76_235 (Roundworm) 3 3

Caenorhabditis_briggsae_2 1 1

Hymenolepis_microstoma_ 1 1

Echinococcus_multilocularis_ 1 1

Echinococcus_granulosus_ 1 1

Taenia_solium_ (Pork tapeworm) 1 1

Schistosoma_mansoni_ 1 1

Nematostella_vectensis_1.0 (Starlet sea anemone) 1 1

Hydra_vulgaris 1 1

Amphimedon_queenslandica 1 1

Trichoplax_adhaerens_ 1 1

Proterospongia_sp._ATCC_50818_ 1 1

Monosiga_brevicollis_ 1 1

Conidiobolus_coronatus_NRRL28638_v1.0 1 1

Mortierella_verticillata_NRRL_6337_ 4 4

Phycomyces_blakesleeanus_ 8 8

Rhizopus_oryzae_RA_99-880_ 9 9

Mucor_circinelloides_ 6 6

Rhizomucor_miehei_CAU432_ 4 4

Malassezia_globosa_CBS_7966_ 2 2

Sporisorium_reilianum_22 1 1

Ustilago_maydis_ 1 1

Mixia_osmundae_IAM_14324_v1.0 2 2

Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 2 2

Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 1 1

Melampsora_laricis-populina_ 2 2

Rhodotorula_graminis_WP1_v1.0 1 1

Sporobolomyces_roseus_IAM_13481_ 1 1

Microbotryum_violaceum_22 2 2

Wallemia_sebi_v1.0 1 1

Sphaerobolus_stellatus_v1.0 10 10

Piloderma_croceum_F_1598_v1.0 2 2

Coniophora_puteana 2 2

Hydnomerulius_pinastri_v2.0 3 3

Paxillus_rubicundulus_Ve08.2h10_v1.0 2 2

Pisolithus_microcarpus_441_v1.0 2 2

Pisolithus_tinctorius_Marx_270_v1.0 2 2

Scleroderma_citrinum_Foug_A_v1.0 2 2

Coprinopsis_cinerea_okayama7_130_v3 3 3

Pleurotus_ostreatus_ (Oyster mushroom) 2 2

Amanita_thiersii_Skay4041_v1.0 2 2

Amanita_muscaria_Koide_v1.0 (Fly agaric) 4 4

Galerina_marginata_v1.0 2 2

Hebeloma_cylindrosporum_h7_v2.0 2 2

Laccaria_bicolor_S238N-H82_ 3 3

Agaricus_bisporus_var._bisporus_ 1 1

Schizophyllum_commune_ 1 1

Stereum_hirsutum_FP-91666_SS1__v1.0 2 2

Heterobasidion_annosum_ 2 2

Gloeophyllum_trabeumv1.0 2 2

Punctularia_strigosozonata_v1.0 2 2

Sebacina_vermifera_MAFF_305830_v1.0 5 5

Fomitiporia_mediterranea_v1.0 3 3

Tulasnella_calospora_AL13/4D_v1.0 1 1

Postia_placenta_ 3 3

Wolfiporia_cocos_MD-104_SS10__v1.0 2 2

Fomitopsis_pinicolav1.0 3 3

Fomitopsis_pinicola_FP-58527_SS1_v3.0 2 2

Phanerochaete_chrysosporium_RP-78_2.1 1 1

Dichomitus_squalens 2 2

Trametes_versicolor_v1.0 2 2

Tremella_mesenterica_ (Witches' butter) 1 1

Daldinia_eschscholzii_EC12_v1.0 2 2

Apiospora_montagnei_NRRL_25634_v1.0 2 2

Magnaporthe_poae_ATCC_64411_22 1 1

Magnaporthe_grisea_70-15_ 2 2

Podospora_anserina_ 2 2

Sporotrichum_thermophile_ATCC_42464_ 2 2

Thielavia_terrestris_NRRL_8126_ 2 2

Chaetomium_globosum_CBS_148.51_ 2 2

Neurospora_tetrasperma_ 2 2

Neurospora_discreta_FGSC_8579_ 2 2

Neurospora_crassa_OR74A_ 2 2

Cryphonectria_parasitica_ (Chestnut blight fungus) 2 2

Verticillium_albo-atrum_VaMs.102_ 2 2

Verticillium_dahliae_VdLs.17_ 2 2

Acremonium_alcalophilumv_1.0 2 2

Glomerella_graminicola_22 2 2

Fusarium_graminearum_ 2 2

Nectria_haematococca_mpVI_ 2 2

Fusarium_oxysporum_f._sp._lycopersici_4286_ 2 2

Fusarium_verticillioides_7600_ 2 2

Trichoderma_asperellum_CBS_433.97_v1.0 2 2

Trichoderma_atroviride_ 2 2

Trichoderma_citrinoviride_v1.0 3 3

Trichoderma_reesei_1.2 2 2

Trichoderma_virens_Gv29-8_ 2 2

Trichoderma_longibrachiatum_ATCC_18648_v1.0 1 1

Trichoderma_harzianum_CBS_226.95_v1.0 2 2

Amorphotheca_resinae_v1.0 (Creosote fungus) 2 2

Botrytis_cinerea_B05.10_ 2 2

Sclerotinia_sclerotiorum_ 2 2

Blumeria_graminis_22 2 2

Didymella_exigua_CBS_183.55_v1.0 2 2

Leptosphaeria_maculans_22 2 2

Setosphaeria_turcica_v1.0 2 2

Cochliobolus_miyabeanus_ATCC_44560_v1.0 2 2

Cochliobolus_victoriae_FI3_v1.0 2 2

Cochliobolus_carbonum_26-R-13_v1.0 2 2

Cochliobolus_heterostrophus_ (Southern corn leaf blight pathogen) 2 2

Alternaria_brassicicola_ 2 2

Cochliobolus_lunatus_m118_v2.0 2 2

Pyrenophora_teres_f._teres_22 2 2

Pyrenophora_tritici-repentis_ 2 2

Stagonospora_nodorum_ 2 2

Mycosphaerella_graminicola_IPO323_ 2 2

Zasmidium_cellare_ATCC_36951_v1.0 2 2

Dothistroma_septosporum 3 3

Septoria_musiva_v1.0 2 2

Mycosphaerella_fijiensis_CIRAD86_ 3 3

Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 2 2

Paracoccidioides_brasiliensis_Pb18_ 2 2

Coccidioides_posadasii_RMSCC_3488_ 2 2

Coccidioides_immitis_RS_ 2 2

Ajellomyces_dermatitidis_SLH14081_ 2 2

Histoplasma_capsulatum_class_NAmI_strain_WU24_ 2 2

Microsporum_canis_CBS_113480_ 2 2

Trichophyton_equinum_CBS_127.97_ 2 2

Trichophyton_verrucosum_HKI_0517_ 2 2

Arthroderma_benhamiae_CBS_112371_ 2 2

Trichophyton_tonsurans_CBS_112818_ 2 2

Trichophyton_rubrum_CBS_118892_ 2 2

Uncinocarpus_reesii_1704_ 2 2

Aspergillus_zonatus_v1.0 2 2

Penicillium_chrysogenum_Wisconsin_54-1255_ 2 2

Penicillium_chrysogenum_v1.0 2 2

Aspergillus_acidus_v1.0 2 2

Aspergillus_fumigatus_Af293 2 2

Aspergillus_brasiliensis_v1.0 2 2

Aspergillus_nidulans_FGSC_A4_ 2 2

Aspergillus_sydowii_v1.0 2 2

Aspergillus_versicolor_v1.0 2 2

Aspergillus_glaucus 2 2

Aspergillus_carbonarius_ITEM_5010_ 2 2

Neosartorya_fischeri_NRRL_181_ 2 2

Aspergillus_terreus_NIH2624_ 2 2

Aspergillus_tubingensis_v1.0 2 2

Aspergillus_wentii_v1.0 2 2

Aspergillus_oryzae_RIB40_ 2 2

Aspergillus_niger_22 2 2

Aspergillus_niger_ATCC_1015_ 2 2

Aspergillus_flavus_NRRL3357_ 2 2

Aspergillus_clavatus_NRRL_1_ 2 2

Penicillium_marneffei_ATCC_18224_ 2 2

Tuber_melanosporum_Mel28_22 2 2

Tuber_melanosporum_Vittad_ (Perigord truffle) 2 2

Hansenula_polymorpha_v2.0 2 2

Dekkera_bruxellensis_CBS_2499_v2.0 1 1

Pichia_membranifaciensv1.0 1 1

Candida_tanzawaensis_NRRL_Y-17324__v1.0 1 1

Candida_dubliniensis_CD36_ 1 1

Candida_tropicalis_MYA-3404_ 1 1

Candida_parapsilosis_ 1 1

Candida_albicans_SC5314 1 1

Lodderomyces_elongisporus_NRRL_YB-4239_ 1 1

Babjeviella_inositovora_NRRL_Y-12698_v1.0 1 1

Pichia_stipitis_CBS_6054_ 1 1

Candida_guilliermondii_ATCC_6260_ 1 1

Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1 1

Debaromyces_hansenii 1 1

Wickerhamomyces_anomalus 1 1

Pichia_pastoris_GS115_ 1 1

Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1 1

Yarrowia_lipolytica_CLIB122 1 1

Candida_lusitaniae_ATCC_42720_ 1 1

Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1 1

Vanderwaltozyma_polyspora_DSM_70294_ 1 1

Candida_glabrata_CBS138 1 1

Kluyveromyces_thermotolerans_CBS_6340 1 1

Lachancea_kluyveri_ 1 1

Kluyveromyces_waltii 1 1

Ashbya_gossypii_ATCC_10895_ 1 1

Zygosaccharomyces_rouxii_ 1 1

Saccharomyces_mikatae_MIT 1 1

Saccharomyces_paradoxus_MIT 1 1

Saccharomyces_cerevisiae_76 (Baker's yeast) 1 1

Saccharomyces_bayanus_MIT 1 1

Kluyveromyces_lactis 1 1

Schizosaccharomyces_cryophilus_OY26_22 2 2

Schizosaccharomyces_octosporus_yFS286_ 1 1

Schizosaccharomyces_japonicus_yFS275_ 2 2

Schizosaccharomyces_pombe (Fission yeast) 2 2

Catenaria_anguillulae_PL171_v1.0 3 3

Allomyces_macrogynus_ATCC_38327_ 5 5

Spizellomyces_punctatus_DAOM_BR117_ 3 3

Entamoeba_histolytica_1 1 1

Eucalyptus_grandis_v201 (Rose gum) 1 1

Gossypium_raimondii_v221 1 1

Manihot_esculenta_v147 (Cassava) 1 1

Triticum_aestivum_22 (Bread wheat) 4 4

Phyllostachys_heterocyclavar._pubescens (Kikko-chiku) 1 1

Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1

Bacillus_halodurans_C-125 1 1

Bacillus_cellulosilyticus_DSM_2522 1 1

Rhodospirillum_rubrum_F11 1 1

Shewanella_oneidensis_MR-1 1 1

Nitrosococcus_watsonii_C-113 1 1

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Longest transcript per gene
Genome Number Proteins

Homo_sapiens_69_37 (Human) 2 2

Pan_troglodytes_69_2.1.4 (Chimpanzee) 2 2

Gorilla_gorilla_69_3.1 (Western gorilla) 3 3

Pongo_abelii_69_2 (Sumatran orangutan) 2 2

Nomascus_leucogenys_69_1.0 (Northern white-cheeked gibbon) 2 2

Macaca_mulatta_69_1 (Rhesus monkey) 2 2

Callithrix_jacchus_69_3.2.1 (White-tufted-ear marmoset) 2 2

Otolemur_garnettii_69_3 (Small-eared galago) 2 2

Microcebus_murinus_69_1 (Gray mouse lemur) 1 1

Rattus_norvegicus_69_3.4 (Norway rat) 2 2

Mus_musculus_69_38 (House mouse) 3 3

Ictidomys_tridecemlineatus_69_2 (Thirteen-lined ground squirrel) 2 2

Cavia_porcellus_69_3 (Domestic guinea pig) 3 3

Oryctolagus_cuniculus_69_2 (Rabbit) 2 2

Ochotona_princeps_69 (American pika) 2 2

Tupaia_belangeri_69 (Northern tree shrew) 2 2

Sus_scrofa_69_10.2 (Pig) 2 2

Bos_taurus_69_3.1 (Cattle) 3 3

Vicugna_pacos_69_1 (Alpaca) 1 1

Tursiops_truncatus_69_1 (Bottlenose dolphin) 2 2

Mustela_putorius_furo_69_1.0 (Domestic ferret) 2 2

Ailuropoda_melanoleuca_69_1 (Giant panda) 2 2

Canis_familiaris_69_3.1 (Dog) 2 2

Felis_catus_69 (Domestic cat) 2 2

Equus_caballus_69_2 (Horse) 2 2

Myotis_lucifugus_69_2.0 (Little brown bat) 1 1

Pteropus_vampyrus_69_1 (Large flying fox) 2 2

Sorex_araneus_69_1 (European shrew) 1 1

Erinaceus_europaeus_69 (Western European hedgehog) 2 2

Procavia_capensis_69_1 (Cape rock hyrax) 2 2

Loxodonta_africana_69_3 (African savanna elephant) 2 2

Echinops_telfairi_69 (Small Madagascar hedgehog) 2 2

Dasypus_novemcinctus_69_2 (Nine-banded armadillo) 1 1

Choloepus_hoffmanni_69_1 (Hoffmann's two-fingered sloth) 1 1

Macropus_eugenii_69_1.0 (Tammar wallaby) 2 2

Sarcophilus_harrisii_69_7.0 (Tasmanian devil) 2 2

Monodelphis_domestica_69_5 (Gray short-tailed opossum) 1 1

Ornithorhynchus_anatinus_69_5 (Platypus) 2 2

Petromyzon_marinus_69_7.0 (Sea lamprey) 1 1

Meleagris_gallopavo_69_2 (Turkey) 2 2

Gallus_gallus_69_2 (Chicken) 2 2

Taeniopygia_guttata_69_3.2.4 (Zebra finch) 2 2

Pelodiscus_sinensis_69_1.0 (Chinese soft-shelled turtle) 2 2

Anolis_carolinensis_69_2.0 (Green anole) 2 2

Xenopus_tropicalis_69_4.2 (Tropical clawed frog) 2 2

Latimeria_chalumnae_69_1 (Coelacanth) 1 1

Gadus_morhua_69_1 (Atlantic cod) 2 2

Tetraodon_nigroviridis_69_8 (Spotted green pufferfish) 2 2

Takifugu_rubripes_69_4 (Torafugu) 2 2

Gasterosteus_aculeatus_69_1 (Three-spined stickleback) 2 2

Oryzias_latipes_69_1 (Japanese medaka) 2 2

Xiphophorus_maculatus_69_4.4.2 (Southern platyfish) 2 2

Oreochromis_niloticus_69_1.0 (Nile tilapia) 2 2

Danio_rerio_69_9 (Zebrafish) 2 2

Ciona_savignyi_69_2.0 (Pacific transparent sea squirt) 1 1

Ciona_intestinalis_69 (Vase tunicate) 2 2

Caenorhabditis_elegans_69_215 (Roundworm) 2 2

Saccharomyces_cerevisiae_69_4 (Baker's yeast) 1 1

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Others
Genome Number Proteins

Homo_sapiens_75_37_(old_version_GRC) (Human) 16 16

Homo_sapiens__(NCBI_version) (Human) 6 6

Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate) (House mouse) 3 3

Loa_loa_v3.3_(Request) (Eye worm) 1 1

Wuchereria_bancrofti_v1.0_(Request) (Agent of lymphatic filariasis) 1 1

NCBI_plasmid_sequences_(Plasmids) 2 2

SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 26 26

Protozoadb_2010_08_(Protozoadb) 2 2

Protein_Data_Bank_(all_PDB_sequenc) 48 48

STRING_v9.0.5_(STRING) 133 133

Uniprot_2018_03_genome 2289 2289

NCBI_2017_08_genome 2305 2301

PDB_chains_(SCOP_1.75)_(PDB) 3 3

TargetDB__(Targets) 7 7

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Domain combinations for Sec2 N-terminal region superfamily in groups of genomes