SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for TBP-interacting protein-like superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a TBP-interacting protein-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Thermococcus_sp._4557 1 1
Thermococcus_onnurineus_NA1 1 1
Thermococcus_kodakarensis_KOD1 1 1
Thermococcus_gammatolerans_EJ3 1 1
Thermococcus_sibiricus_MM_739 1 1
Thermococcus_barophilus_MP 1 1
Pyrococcus_sp._ST04 1 1
Pyrococcus_yayanosii_CH1 1 1
Pyrococcus_horikoshii_OT3 1 1
Pyrococcus_abyssi_GE5 1 1
Pyrococcus_furiosus_COM1 1 1

Strains
Genome     Number   Proteins
Thermococcus_sp._AM4 1 1
Thermococcus_sp._CL1 1 1
Thermococcus_litoralis_DSM_5473 1 1
Pyrococcus_sp._NA2 1 1
Pyrococcus_furiosus_DSM_3638 1 1

Others
Genome     Number   Proteins
TargetDB__(Targets) 1 1
UniProt__viral_sequences_(Viral) 1 1
NCBI_viral_sequences_(Viral) 1 1
PDB_chains_(SCOP_1.75)_(PDB) 1 1
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 3 3
STRING_v9.0.5_(STRING) 7 7
Uniprot_2018_03_genome 42 42
NCBI_2017_08_genome 50 50
Protein_Data_Bank_(all_PDB_sequenc) 1 1

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