SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for PH1570-like superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a PH1570-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Thermococcus_sp._4557 1 1
Thermococcus_onnurineus_NA1 1 1
Thermococcus_kodakarensis_KOD1 1 1
Thermococcus_gammatolerans_EJ3 1 1
Thermococcus_sibiricus_MM_739 1 1
Thermococcus_barophilus_MP 1 1
Pyrococcus_sp._ST04 1 1
Pyrococcus_yayanosii_CH1 1 1
Pyrococcus_horikoshii_OT3 1 1
Pyrococcus_abyssi_GE5 1 1
Pyrococcus_furiosus_COM1 1 1

Strains
Genome     Number   Proteins
Bacillus_cereus_E33L 1 1
Thermococcus_sp._AM4 1 1
Thermococcus_sp._CL1 1 1
Thermococcus_litoralis_DSM_5473 2 2
Pyrococcus_sp._NA2 1 1
Pyrococcus_furiosus_DSM_3638 1 1

Others
Genome     Number   Proteins
NCBI_plasmid_sequences_(Plasmids) 1 1
Protein_Data_Bank_(all_PDB_sequenc) 2 2
PDB_chains_(SCOP_1.75)_(PDB) 1 1
TargetDB__(Targets) 2 2
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 6 6
STRING_v9.0.5_(STRING) 8 8
Uniprot_2018_03_genome 40 40
NCBI_2017_08_genome 46 46

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