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Home > SCOP hierarchy > Acetoacetate decarboxylase-like > Domain combinations

Domain combinations for Acetoacetate decarboxylase-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Acetoacetate decarboxylase-like domain in that genome.

Complete genomes
Genome Number Proteins

Adineta_vaga 1 1

Proterospongia_sp._ATCC_50818_ 2 1

Monosiga_brevicollis_ 2 1

Sporisorium_reilianum_22 1 1

Ustilago_maydis_ 1 1

Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 2 2

Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 2 2

Melampsora_laricis-populina_ 2 2

Rhodotorula_graminis_WP1_v1.0 3 3

Microbotryum_violaceum_22 1 1

Sphaerobolus_stellatus_v1.0 3 3

Amanita_thiersii_Skay4041_v1.0 3 3

Stereum_hirsutum_FP-91666_SS1__v1.0 1 1

Heterobasidion_annosum_ 1 1

Phanerochaete_chrysosporium_RP-78_2.1 1 1

Dichomitus_squalens 1 1

Trametes_versicolor_v1.0 1 1

Daldinia_eschscholzii_EC12_v1.0 1 1

Apiospora_montagnei_NRRL_25634_v1.0 3 3

Magnaporthe_poae_ATCC_64411_22 1 1

Magnaporthe_grisea_70-15_ 1 1

Thielavia_terrestris_NRRL_8126_ 2 2

Chaetomium_globosum_CBS_148.51_ 1 1

Cryphonectria_parasitica_ (Chestnut blight fungus) 1 1

Verticillium_albo-atrum_VaMs.102_ 3 3

Verticillium_dahliae_VdLs.17_ 1 1

Glomerella_graminicola_22 3 3

Fusarium_graminearum_ 3 3

Nectria_haematococca_mpVI_ 7 7

Fusarium_oxysporum_f._sp._lycopersici_4286_ 8 8

Fusarium_verticillioides_7600_ 6 6

Trichoderma_asperellum_CBS_433.97_v1.0 4 4

Trichoderma_atroviride_ 3 3

Trichoderma_citrinoviride_v1.0 1 1

Trichoderma_reesei_1.2 1 1

Trichoderma_virens_Gv29-8_ 2 2

Trichoderma_longibrachiatum_ATCC_18648_v1.0 1 1

Trichoderma_harzianum_CBS_226.95_v1.0 3 3

Amorphotheca_resinae_v1.0 (Creosote fungus) 1 1

Botrytis_cinerea_B05.10_ 1 1

Sclerotinia_sclerotiorum_ 1 1

Didymella_exigua_CBS_183.55_v1.0 2 2

Leptosphaeria_maculans_22 2 2

Setosphaeria_turcica_v1.0 6 6

Cochliobolus_miyabeanus_ATCC_44560_v1.0 3 3

Cochliobolus_victoriae_FI3_v1.0 3 3

Cochliobolus_carbonum_26-R-13_v1.0 3 3

Cochliobolus_heterostrophus_ (Southern corn leaf blight pathogen) 5 5

Alternaria_brassicicola_ 1 1

Cochliobolus_lunatus_m118_v2.0 4 4

Pyrenophora_teres_f._teres_22 3 3

Pyrenophora_tritici-repentis_ 4 4

Stagonospora_nodorum_ 3 3

Mycosphaerella_graminicola_IPO323_ 2 2

Zasmidium_cellare_ATCC_36951_v1.0 4 4

Dothistroma_septosporum 2 2

Septoria_musiva_v1.0 2 2

Mycosphaerella_fijiensis_CIRAD86_ 2 2

Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 2 2

Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1 1

Aspergillus_zonatus_v1.0 1 1

Penicillium_chrysogenum_Wisconsin_54-1255_ 1 1

Penicillium_chrysogenum_v1.0 1 1

Aspergillus_acidus_v1.0 3 3

Aspergillus_fumigatus_Af293 2 2

Aspergillus_brasiliensis_v1.0 3 3

Aspergillus_nidulans_FGSC_A4_ 3 3

Aspergillus_sydowii_v1.0 6 6

Aspergillus_versicolor_v1.0 7 7

Aspergillus_glaucus 2 2

Aspergillus_carbonarius_ITEM_5010_ 1 1

Neosartorya_fischeri_NRRL_181_ 2 2

Aspergillus_terreus_NIH2624_ 2 2

Aspergillus_tubingensis_v1.0 3 3

Aspergillus_wentii_v1.0 2 2

Aspergillus_oryzae_RIB40_ 4 4

Aspergillus_niger_22 3 3

Aspergillus_niger_ATCC_1015_ 3 3

Aspergillus_flavus_NRRL3357_ 5 5

Penicillium_marneffei_ATCC_18224_ 1 1

Selaginella_moellendorffii_ 2 2

Picea_abies (Norway spruce) 1 1

Eucalyptus_grandis_v201 (Rose gum) 2 2

Theobroma_cacao_B97-61/B2_v1 (Cacao) 1 1

Gossypium_raimondii_v221 9 9

Citrus_clementina_v165 2 2

Citrus_sinensis_v154 (Sweet orange) 1 1

Thellungiella_halophila_v173 2 2

Brassica_rapa_Chiifu-401_1.2 (Field mustard) 2 2

Capsella_rubella_v183 1 1

Arabidopsis_thaliana_10 (Thale cress) 5 5

Carica_papaya_ (Papaya) 1 1

Medicago_truncatula_ (Barrel medic) 6 6

Phaseolus_vulgaris_v186 (French bean) 1 1

Glycine_max_v109 (Soybean) 1 1

Cucumis_sativus_v122 (Cucumber) 1 1

Fragaria_vesca_ (Wild strawberry) 1 1

Malus_domestica_v196 (Apple) 1 1

Prunus_persica_v139 (Peach) 1 1

Linum_usitatissimum_v200 (Flax) 1 1

Manihot_esculenta_v147 (Cassava) 2 2

Populus_trichocarpa_v156 (Black cottonwood) 1 1

Vitis_vinifera_ (Wine grape) 1 1

Mimulus_guttatus_v140 (Spotted monkey flower) 10 10

Solanum_lycopersicum_v.2.3 (Tomato) 1 1

Solanum_tuberosum_ (Potato) 2 2

Aquilegia_coerulea_v195 10 10

Triticum_aestivum_22 (Bread wheat) 1 1

Aegilops_tauschii_22 1 1

Oryza_barthii_22 (African wild rice) 1 1

Oryza_meridionalis_22 7 7

Oryza_glumaepatula_22 5 5

Oryza_punctata_22 3 3

Oryza_nivara_22 1 1

Oryza_brachyantha_22 (Malo sina) 1 1

Oryza_sativa_ssp._japonica_5.0 (Japanese rice) 3 3

Oryza_sativa_v193 (Rice) 3 3

Phyllostachys_heterocyclavar._pubescens (Kikko-chiku) 1 1

Panicum_virgatum_v202 (Switchgrass) 1 1

Setaria_italica_v164 (Foxtail millet) 1 1

Zea_mays_v181 (Maize) 5 5

Sorghum_bicolor_ (Sorghum) 1 1

Musa_acuminata_22 (Wild Malaysian banana) 2 2

Amborella_trichopoda_22 1 1

Physcomitrella_patens 2 2

Coccomyxa_subellipsoidea_sp._C-169_v2 1 1

Chlamydomonas_reinhardtii_4.0 1 1

Ostreococcus_sp._RCC809_ 1 1

Ostreococcus_lucimarinus_CCE9901_ 1 1

Ostreococcus_tauri_ 1 1

Bathycoccus_prasinos_ 1 1

Micromonas_sp._RCC299_ 2 2

Micromonas_pusilla_CCMP1545_v3.0 2 2

Bigelowiella_natans_CCMP2755_22 2 2

Trypanosoma_congolense_2.4 1 1

Albugo_laibachii_22 3 3

Tetrahymena_thermophila_SB210_1_ 2 1

Naegleria_gruberi_ 2 1

Emiliania_huxleyi_CCMP1516_ 2 2

Microcoleus_sp._PCC_7113 1 1

Gloeocapsa_sp._PCC_7428 1 1

Gloeobacter_violaceus_PCC_7421 1 1

Rivularia_sp._PCC_7116 1 1

Anabaena_variabilis_ATCC_29413 1 1

Nostoc_punctiforme_PCC_73102 2 2

Nostoc_sp._PCC_7120 2 2

Nostoc_sp._PCC_7524 1 1

Conexibacter_woesei_DSM_14684 2 2

Slackia_heliotrinireducens_DSM_20476 1 1

Olsenella_uli_DSM_7084 1 1

Rubrobacter_xylanophilus_DSM_9941 1 1

Ilumatobacter_coccineus 3 3

Thermobispora_bispora_DSM_43833 1 1

Acidothermus_cellulolyticus_11B 1 1

Modestobacter_marinus 1 1

Geodermatophilus_obscurus_DSM_43160 2 2

Kineococcus_radiotolerans_SRS30216 1 1

Catenulispora_acidiphila_DSM_44928 2 2

Stackebrandtia_nassauensis_DSM_44728 1 1

Frankia_sp._EAN1pec 2 2

Frankia_alni_ACN14a 3 3

Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 1 1

Thermomonospora_curvata_DSM_43183 1 1

Streptosporangium_roseum_DSM_43021 3 3

Kitasatospora_setae_KM-6054 1 1

Streptomyces_coelicolor_A3(2) 1 1

Streptomyces_sp._PAMC26508 1 1

Streptomyces_flavogriseus_ATCC_33331 1 1

Streptomyces_sp._SirexAA-E 1 1

Streptomyces_griseus_subsp._griseus_NBRC_13350 2 2

Streptomyces_bingchenggensis_BCW-1 3 3

Streptomyces_violaceusniger_Tu_4113 2 2

Streptomyces_avermitilis_MA-4680 2 2

Streptomyces_cattleya_NRRL_8057_=_DSM_46488 3 3

Streptomyces_scabiei_87.22 1 1

Streptomyces_hygroscopicus_subsp._jinggangensis_5008 2 2

Actinosynnema_mirum_DSM_43827 1 1

Saccharomonospora_viridis_DSM_43017 1 1

Pseudonocardia_dioxanivorans_CB1190 1 1

Saccharopolyspora_erythraea_NRRL_2338 2 2

Amycolatopsis_mediterranei_U32 2 2

Kribbella_flavida_DSM_17836 1 1

Nocardioides_sp._JS614 1 1

Microlunatus_phosphovorus_NM-1 1 1

Verrucosispora_maris_AB-18-032 2 2

Micromonospora_sp._L5 2 2

Micromonospora_aurantiaca_ATCC_27029 2 2

Actinoplanes_sp._N902-109 2 2

Actinoplanes_sp._SE50/110 2 2

Actinoplanes_missouriensis_431 2 2

Tsukamurella_paurometabola_DSM_20162 1 1

Gordonia_sp._KTR9 2 2

Gordonia_polyisoprenivorans_VH2 3 3

Gordonia_bronchialis_DSM_43247 2 2

Rhodococcus_jostii_RHA1 4 4

Rhodococcus_equi_103S 2 2

Rhodococcus_opacus_B4 2 2

Rhodococcus_erythropolis_PR4 2 2

Nocardia_farcinica_IFM_10152 1 1

Amycolicicoccus_subflavus_DQS3-9A1 4 4

Mycobacterium_sp._JLS 1 1

Mycobacterium_intracellulare_ATCC_13950 2 2

Mycobacterium_avium_104 2 2

Mycobacterium_vanbaalenii_PYR-1 2 2

Mycobacterium_canettii_CIPT_140010059 2 2

Mycobacterium_africanum_GM041182 1 1

Mycobacterium_tuberculosis_KZN_1435 1 1

Mycobacterium_tuberculosis 1 1

Mycobacterium_bovis_BCG_str._Pasteur_1173P2 1 1

Mycobacterium_rhodesiae_NBB3 3 3

Mycobacterium_ulcerans_Agy99 2 2

Mycobacterium_gilvum_PYR-GCK 1 1

Mycobacterium_chubuense_NBB4 1 1

Mycobacterium_marinum_M 3 3

Mycobacterium_smegmatis_str._MC2_155 1 1

Microbacterium_testaceum_StLB037 1 1

Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 1 1

Isoptericola_variabilis_225 1 1

Cellulomonas_flavigena_DSM_20109 1 1

Cellulomonas_fimi_ATCC_484 3 3

[Cellvibrio]_gilvus_ATCC_13127 2 2

Arthrobacter_phenanthrenivorans_Sphe3 1 1

Arthrobacter_sp._FB24 2 2

Renibacterium_salmoninarum_ATCC_33209 1 1

Sphaerobacter_thermophilus_DSM_20745 1 1

Herpetosiphon_aurantiacus_DSM_785 2 2

Truepera_radiovictrix_DSM_17093 1 1

Deinococcus_gobiensis_I-0 2 2

Deinococcus_deserti_VCD115 1 1

Deinococcus_maricopensis_DSM_21211 1 1

Deinococcus_radiodurans_R1 2 2

Acetobacterium_woodii_DSM_1030 1 1

Clostridium_saccharolyticum_WM1 1 1

Clostridium_phytofermentans_ISDg 1 1

Clostridium_beijerinckii_NCIMB_8052 1 1

Clostridium_acetobutylicum_ATCC_824 1 1

Lactobacillus_casei_ATCC_334 1 1

Lactobacillus_salivarius_CECT_5713 1 1

Lactobacillus_plantarum_JDM1 1 1

Exiguobacterium_sp._MH3 1 1

Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 1 1

Brevibacillus_brevis_NBRC_100599 1 1

Paenibacillus_terrae_HPL-003 1 1

Paenibacillus_polymyxa_M1 2 2

Solibacillus_silvestris_StLB046 1 1

Lysinibacillus_sphaericus_C3-41 1 1

Halobacillus_halophilus_DSM_2266 1 1

Bacillus_sp._JS 1 1

Bacillus_amyloliquefaciens_FZB42 1 1

Bacillus_atrophaeus_1942 2 2

Bacillus_subtilis_subsp._subtilis_str._168 1 1

Bacillus_licheniformis_DSM_13_=_ATCC_14580 1 1

Bacillus_pseudofirmus_OF4 1 1

Bacillus_clausii_KSM-K16 1 1

Bacillus_megaterium_DSM_319 1 1

Staphylococcus_carnosus_subsp._carnosus_TM300 1 1

Chlorobium_phaeobacteroides_DSM_266 1 1

Chitinophaga_pinensis_DSM_2588 1 1

Salinibacter_ruber_M8 1 1

Cyclobacterium_marinum_DSM_745 1 1

Marivirga_tractuosa_DSM_4126 1 1

Cytophaga_hutchinsonii_ATCC_33406 1 1

Pedobacter_saltans_DSM_12145 1 1

Owenweeksia_hongkongensis_DSM_17368 1 1

Zunongwangia_profunda_SM-A87 1 1

Capnocytophaga_canimorsus_Cc5 1 1

Candidatus_Protochlamydia_amoebophila_UWE25 1 1

Phycisphaera_mikurensis_NBRC_102666 1 1

Isosphaera_pallida_ATCC_43644 1 1

Coraliomargarita_akajimensis_DSM_45221 1 1

Thermovirga_lienii_DSM_17291 1 1

Turneriella_parva_DSM_21527 1 1

Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 1 1

Leptospira_interrogans_serovar_Lai_str._IPAV 2 2

Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 1 1

Mesotoga_prima_MesG1.Ag.4.2 1 1

Candidatus_Solibacter_usitatus_Ellin6076 2 2

Granulicella_tundricola_MP5ACTX9 1 1

Candidatus_Koribacter_versatilis_Ellin345 1 1

Terriglobus_roseus_DSM_18391 1 1

Acidobacterium_capsulatum_ATCC_51196 1 1

Desulfomonile_tiedjei_DSM_6799 1 1

Desulfatibacillum_alkenivorans_AK-01 3 3

Desulfococcus_oleovorans_Hxd3 1 1

Desulfovibrio_magneticus_RS-1 1 1

Geobacter_sulfurreducens_KN400 1 1

Sorangium_cellulosum_'So_ce_56' 3 3

Anaeromyxobacter_dehalogenans_2CP-1 1 1

Stigmatella_aurantiaca_DW4/3-1 5 5

Corallococcus_coralloides_DSM_2259 2 2

Myxococcus_xanthus_DK_1622 1 1

Myxococcus_fulvus_HW-1 1 1

Chromobacterium_violaceum_ATCC_12472 1 1

Thiomonas_arsenitoxydans 1 1

Thiomonas_intermedia_K12 1 1

Rubrivivax_gelatinosus_IL144 1 1

Leptothrix_cholodnii_SP-6 1 1

Burkholderia_phytofirmans_PsJN 2 2

Burkholderia_phymatum_STM815 2 2

Burkholderia_xenovorans_LB400 2 2

Cupriavidus_taiwanensis_LMG_19424 1 1

Ralstonia_pickettii_12D 1 1

Ralstonia_solanacearum_CFBP2957 1 1

Burkholderia_sp._RPE64 1 1

Burkholderia_thailandensis_E264 1 1

Burkholderia_pseudomallei_1106a 1 1

Burkholderia_mallei_SAVP1 1 1

Burkholderia_ambifaria_AMMD 1 1

Burkholderia_cenocepacia_HI2424 2 2

Burkholderia_multivorans_ATCC_17616 2 2

Burkholderia_vietnamiensis_G4 2 2

Burkholderia_gladioli_BSR3 1 1

Burkholderia_glumae_BGR1 1 1

Delftia_sp._Cs1-4 1 1

Acidovorax_avenae_subsp._avenae_ATCC_19860 1 1

Collimonas_fungivorans_Ter331 1 1

Bordetella_avium_197N 1 1

Bordetella_bronchiseptica_RB50 1 1

Novosphingobium_aromaticivorans_DSM_12444 1 1

Sphingobium_japonicum_UT26S 1 1

Sphingomonas_sp._MM-1 1 1

Sphingomonas_wittichii_RW1 3 3

Pseudovibrio_sp._FO-BEG1 1 1

Tistrella_mobilis_KA081020-065 1 1

Azospirillum_brasilense_Sp245 1 1

Gluconacetobacter_diazotrophicus_PAl_5 1 1

Acidiphilium_multivorum_AIU301 1 1

Acidiphilium_cryptum_JF-5 1 1

Starkeya_novella_DSM_506 1 1

Xanthobacter_autotrophicus_Py2 1 1

Azorhizobium_caulinodans_ORS_571 1 1

Methylobacterium_sp._4-46 1 1

Methylobacterium_nodulans_ORS_2060 2 2

Rhizobium_leguminosarum_bv._viciae_3841 1 1

Agrobacterium_vitis_S4 2 2

Mesorhizobium_opportunistum_WSM2075 1 1

Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 1 1

Mesorhizobium_loti_MAFF303099 3 3

Methylocella_silvestris_BL2 2 2

Beijerinckia_indica_subsp._indica_ATCC_9039 2 2

Hyphomicrobium_sp._MC1 1 1

Hyphomicrobium_denitrificans_ATCC_51888 1 1

Rhodopseudomonas_palustris_BisA53 1 1

Bradyrhizobium_japonicum_USDA_110 4 4

Methylocystis_sp._SC2 1 1

Vibrio_harveyi_ATCC_BAA-1116 1 1

Shewanella_piezotolerans_WP3 1 1

Shewanella_pealeana_ATCC_700345 1 1

Shewanella_oneidensis_MR-1 1 1

Shewanella_baltica_OS185 1 1

Shewanella_woodyi_ATCC_51908 1 1

Shewanella_sp._MR-4 1 1

Shewanella_violacea_DSS12 1 1

Marinobacter_adhaerens_HP15 1 1

Hahella_chejuensis_KCTC_2396 1 1

Legionella_longbeachae_NSW150 2 2

Legionella_pneumophila_str._Corby 1 1

gamma_proteobacterium_HdN1 4 4

Pseudomonas_sp._UW4 1 1

Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 1 1

Pseudomonas_entomophila_L48 1 1

Pseudomonas_putida_F1 1 1

Pseudomonas_protegens_Pf-5 1 1

Pseudomonas_mendocina_ymp 1 1

Acinetobacter_oleivorans_DR1 2 2

Acinetobacter_calcoaceticus_PHEA-2 1 1

Acinetobacter_baumannii_ATCC_17978 1 1

Francisella_sp._TX077308 1 1

Francisella_philomiragia_subsp._philomiragia_ATCC_25017 1 1

Francisella_cf._novicida_3523 1 1

Francisella_novicida_U112 1 1

Candidatus_Korarchaeum_cryptofilum_OPF8 1 1

Metallosphaera_cuprina_Ar-4 1 1

Metallosphaera_sedula_DSM_5348 1 1

Sulfolobus_tokodaii_str._7 1 1

Sulfolobus_islandicus_Y.N.15.51 3 3

Sulfolobus_solfataricus_P2 2 2

Sulfolobus_acidocaldarius_DSM_639 1 1

Vulcanisaeta_moutnovskia_768-28 2 2

Vulcanisaeta_distributa_DSM_14429 2 2

Pyrobaculum_oguniense_TE7 1 1

halophilic_archaeon_DL31 1 1

Methanosaeta_concilii_GP6 1 1

Methanospirillum_hungatei_JF-1 1 1

Methanoplanus_petrolearius_DSM_11571 1 1

Methanoculleus_bourgensis_MS2 1 1

Methanoculleus_marisnigri_JR1 1 1

Archaeoglobus_fulgidus_DSM_4304 2 2

Halopiger_xanaduensis_SH-6 3 3

Haloterrigena_turkmenica_DSM_5511 3 3

Natrinema_sp._J7-2 3 3

Natrialba_magadii_ATCC_43099 1 1

Halorubrum_lacusprofundi_ATCC_49239 1 1

Haloquadratum_walsbyi_DSM_16790 1 1

Halogeometricum_borinquense_DSM_11551 1 1

Haloferax_mediterranei_ATCC_33500 1 1

Haloferax_volcanii_DS2 1 1

Halomicrobium_mukohataei_DSM_12286 2 2

Halorhabdus_utahensis_DSM_12940 2 2

Natronomonas_pharaonis_DSM_2160 1 1

Haloarcula_hispanica_ATCC_33960 2 2

Haloarcula_marismortui_ATCC_43049 2 2

Halalkalicoccus_jeotgali_B3 1 1

Halobacterium_salinarum_R1 1 1

Halobacterium_sp._NRC-1 1 1

Complete_genome_sequence_of_Methanobacterium_sp._Mb1 1 1

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Longest transcript per gene
Genome Number Proteins

Arabidopsis_thaliana_10 (Thale cress) 1 1

Others
Genome Number Proteins

Moniliophthora_perniciosa_FA553__(Genome_survey) 1 1

Malus_x_domestica_(Duplicate) (Apple) 1 1

Ricinus_communis__(Early_assembly) (Castor bean) 1 1

Nicotiana_benthamiana_0.4.4_(Early_draft) 3 3

Solanum_pimpinellifolium_A-1.0_(Early_draft) (Currant tomato) 1 1

Solanum_lycopersicum_v2.3_(Early_assembly) (Tomato) 1 1

Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 1 1

Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 1 1

NCBI_plasmid_sequences_(Plasmids) 29 29

Protein_Data_Bank_(all_PDB_sequenc) 40 40

TargetDB__(Targets) 49 49

PDB_chains_(SCOP_1.75)_(PDB) 2 2

SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 88 88

STRING_v9.0.5_(STRING) 307 305

Uniprot_2018_03_genome 8325 8317

NCBI_2017_08_genome 24534 24529

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Domain combinations for Acetoacetate decarboxylase-like superfamily in groups of genomes