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Domain combinations for BH3703-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a BH3703-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 9 8
Thermomonospora_curvata_DSM_43183 1 1
Actinosynnema_mirum_DSM_43827 11 10
Saccharomonospora_viridis_DSM_43017 4 4
Saccharopolyspora_erythraea_NRRL_2338 2 2
Amycolatopsis_mediterranei_U32 4 4
Propionibacterium_propionicum_F0230a 1 1
Nocardia_cyriacigeorgica_GUH-2 2 2
Nocardia_farcinica_IFM_10152 1 1
Beutenbergia_cavernae_DSM_12333 1 1
Arthrobacter_aurescens_TC1 2 2
Arthrobacter_sp._Rue61a 4 4
Actinomyces_sp._F0330 1 1
Chloroflexus_sp._Y-400-fl 1 1
Chloroflexus_aurantiacus_J-10-fl 1 1
Veillonella_parvula_DSM_2008 3 2
Ruminococcus_albus_7 1 1
Clostridium_lentocellum_DSM_5427 1 1
Butyrivibrio_proteoclasticus_B316 1 1
Streptococcus_oralis_Uo5 2 2
Paenibacillus_polymyxa_M1 2 2
Solibacillus_silvestris_StLB046 1 1
Geobacillus_thermoglucosidasius_C56-YS93 1 1
Bacillus_sp._1NLA3E 1 1
Bacillus_amyloliquefaciens_FZB42 3 3
Bacillus_atrophaeus_1942 2 2
Bacillus_subtilis_subsp._subtilis_str._168 1 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 2 2
Bacillus_halodurans_C-125 1 1
Bacillus_thuringiensis_str._Al_Hakam 1 1
Bacillus_clausii_KSM-K16 1 1
Bacillus_pumilus_SAFR-032 2 2
Bacillus_megaterium_DSM_319 1 1
Staphylococcus_lugdunensis_HKU09-01 3 2
Staphylococcus_aureus_subsp._aureus_JH1 6 6
Staphylococcus_aureus 4 4
Spirosoma_linguale_DSM_74 1 1
Bacteroides_salanitronis_DSM_18170 4 4
Capnocytophaga_canimorsus_Cc5 1 1
Myxococcus_xanthus_DK_1622 1 1
Ralstonia_solanacearum_CFBP2957 1 1
Burkholderia_multivorans_ATCC_17616 1 1
Burkholderia_vietnamiensis_G4 1 1
Advenella_kashmirensis_WT001 1 1
Sphingobium_japonicum_UT26S 1 1
Saccharophagus_degradans_2-40 1 1
Hahella_chejuensis_KCTC_2396 2 2
Marinomonas_sp._MWYL1 1 1
Photorhabdus_asymbiotica 1 1
Photorhabdus_luminescens_subsp._laumondii_TTO1 1 1
Xenorhabdus_nematophila_ATCC_19061 2 2
Pantoea_ananatis_LMG_20103 1 1
Cronobacter_turicensis_z3032 1 1
Citrobacter_rodentium_ICC168 1 1

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Strains
Genome     Number   Proteins
Nocardiopsis_alba_ATCC_BAA-2165 1 1
Saccharothrix_espanaensis_DSM_44229 6 6
Amycolatopsis_mediterranei_RB 4 4
Amycolatopsis_mediterranei_S699 4 4
Amycolatopsis_mediterranei_S699 4 4
Amycolatopsis_orientalis_HCCB10007 6 5
Nocardia_brasiliensis_ATCC_700358 6 5
Mycobacterium_abscessus_subsp._bolletii_50594 1 1
Bifidobacterium_longum_DJO10A 1 1
Bifidobacterium_longum_subsp._longum_BBMN68 1 1
Actinomyces_viscosus_C505 1 1
Clostridium_acidurici_9a 1 1
Streptococcus_oligofermentans_AS_1.3089 4 4
Paenibacillus_polymyxa_SC2 2 2
Geobacillus_sp._Y4.1MC1 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 4 4
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 4 4
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 4 4
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 7 7
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 4 4
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 1 1
Bacillus_amyloliquefaciens_LFB112 2 2
Bacillus_amyloliquefaciens_CC178 2 2
Bacillus_amyloliquefaciens_Y2 6 6
Bacillus_amyloliquefaciens_IT-45 1 1
Bacillus_amyloliquefaciens_XH7 3 3
Bacillus_amyloliquefaciens_LL3 3 3
Bacillus_subtilis_XF-1 2 2
Bacillus_subtilis_QB928 1 1
Bacillus_subtilis_subsp._subtilis_str._BAB-1 3 3
Bacillus_subtilis_subsp._subtilis_str._BSP1 2 2
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 1 1
Bacillus_subtilis_subsp._subtilis_6051-HGW 1 1
Bacillus_subtilis_subsp._spizizenii_str._W23 2 2
Bacillus_subtilis_subsp._natto_BEST195 1 1
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 2 2
Bacillus_thuringiensis_HD-771 1 1
Bacillus_thuringiensis_HD-789 1 1
Bacillus_thuringiensis_MC28 2 2
Bacillus_thuringiensis_serovar_konkukian_str._97-27 5 5
Bacillus_thuringiensis_BMB171 3 3
Bacillus_thuringiensis_serovar_finitimus_YBT-020 2 2
Bacillus_cereus_biovar_anthracis_str._CI 1 1
Bacillus_cereus_AH820 2 2
Bacillus_cereus_G9842 3 3
Bacillus_cereus_F837/76 1 1
Bacillus_cereus_E33L 1 1
Bacillus_cereus_ATCC_14579 3 3
Bacillus_megaterium_WSH-002 1 1
Bacillus_megaterium_QM_B1551 2 2
Bacillus_coagulans_36D1 1 1
Staphylococcus_aureus_subsp._aureus_MSHR1132 8 8
Staphylococcus_pasteuri_SP1 1 1
Staphylococcus_lugdunensis_N920143 4 4
Staphylococcus_aureus_CA-347 10 10
Staphylococcus_aureus_Bmb9393 6 6
Staphylococcus_aureus_M1 10 10
Staphylococcus_aureus_08BA02176 4 4
Staphylococcus_aureus_ST228/18412 4 4
Staphylococcus_aureus_ST228/18341 4 4
Staphylococcus_aureus_ST228/16125 4 4
Staphylococcus_aureus_ST228/16035 4 4
Staphylococcus_aureus_ST228/15532 4 4
Staphylococcus_aureus_ST228/10497 4 4
Staphylococcus_aureus_ST228/10388 4 4
Staphylococcus_aureus_04-02981 6 6
Staphylococcus_aureus_RF122 4 4
Staphylococcus_aureus_subsp._aureus_Z172 3 3
Staphylococcus_aureus_subsp._aureus_6850 7 7
Staphylococcus_aureus_subsp._aureus_SA957 3 3
Staphylococcus_aureus_subsp._aureus_CN1 10 10
Staphylococcus_aureus_subsp._aureus_SA40 3 3
Staphylococcus_aureus_subsp._aureus_11819-97 5 5
Staphylococcus_aureus_subsp._aureus_M013 3 3
Staphylococcus_aureus_subsp._aureus_HO_5096_0412 2 2
Staphylococcus_aureus_subsp._aureus_VC40 6 6
Staphylococcus_aureus_subsp._aureus_T0131 4 4
Staphylococcus_aureus_subsp._aureus_LGA251 5 5
Staphylococcus_aureus_subsp._aureus_ECT-R_2 6 6
Staphylococcus_aureus_subsp._aureus_JKD6159 2 2
Staphylococcus_aureus_subsp._aureus_ED133 10 10
Staphylococcus_aureus_subsp._aureus_ED98 6 6
Staphylococcus_aureus_subsp._aureus_TW20 5 5
Staphylococcus_aureus_subsp._aureus_55/2053 7 7
Staphylococcus_aureus_subsp._aureus_TCH60 7 7
Staphylococcus_aureus_subsp._aureus_str._JKD6008 3 3
Staphylococcus_aureus_subsp._aureus_71193 4 4
Staphylococcus_aureus_subsp._aureus_S0385 4 4
Staphylococcus_aureus_subsp._aureus_str._Newman 12 12
Staphylococcus_aureus_subsp._aureus_Mu3 6 6
Staphylococcus_aureus_subsp._aureus_USA300_TCH1516 8 8
Staphylococcus_aureus_subsp._aureus_USA300_FPR3757 10 10
Staphylococcus_aureus_subsp._aureus_JH9 6 6
Staphylococcus_aureus_subsp._aureus_MSSA476 9 9
Staphylococcus_aureus_subsp._aureus_MRSA252 2 2
Staphylococcus_aureus_subsp._aureus_MW2 9 9
Staphylococcus_aureus_subsp._aureus_N315 6 6
Staphylococcus_aureus_subsp._aureus_Mu50 6 6
Staphylococcus_aureus_subsp._aureus_COL 11 11
Staphylococcus_aureus_subsp._aureus_NCTC_8325 6 6
Treponema_pedis_str._T_A4 3 3
Ralstonia_solanacearum_PSI07 1 1
Burkholderia_multivorans_ATCC_17616 1 1
Bradyrhizobium_japonicum_USDA_6 1 1
Haemophilus_somnus_2336 3 3
Pseudomonas_stutzeri_RCH2 1 1

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Others
Genome     Number   Proteins
NCBI_plasmid_sequences_(Plasmids) 5 5
TargetDB__(Targets) 6 6
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 16 16
STRING_v9.0.5_(STRING) 173 171
Protein_Data_Bank_(all_PDB_sequenc) 4 4
Uniprot_2018_03_genome 2958 2911
NCBI_2017_08_genome 51644 51518
PDB_chains_(SCOP_1.75)_(PDB) 1 1

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