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Home > SCOP hierarchy > Jann2411-like > Domain combinations

Domain combinations for Jann2411-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Jann2411-like domain in that genome.

Complete genomes
Genome Number Proteins

Caenorhabditis_japonica_ 1 1

Thermobaculum_terrenum_ATCC_BAA-798 2 2

Gloeobacter_violaceus_PCC_7421 2 2

Conexibacter_woesei_DSM_14684 3 3

Ilumatobacter_coccineus 1 1

Thermobispora_bispora_DSM_43833 5 4

Nakamurella_multipartita_DSM_44233 3 3

Acidothermus_cellulolyticus_11B 1 1

Modestobacter_marinus 2 2

Blastococcus_saxobsidens_DD2 3 3

Geodermatophilus_obscurus_DSM_43160 1 1

Kineococcus_radiotolerans_SRS30216 1 1

Catenulispora_acidiphila_DSM_44928 10 10

Stackebrandtia_nassauensis_DSM_44728 9 9

Frankia_sp._EAN1pec 1 1

Frankia_alni_ACN14a 2 2

Thermobifida_fusca_YX 1 1

Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 3 3

Thermomonospora_curvata_DSM_43183 3 3

Streptosporangium_roseum_DSM_43021 13 13

Kitasatospora_setae_KM-6054 4 4

Streptomyces_coelicolor_A3(2) 10 10

Streptomyces_sp._PAMC26508 4 4

Streptomyces_flavogriseus_ATCC_33331 4 4

Streptomyces_sp._SirexAA-E 6 6

Streptomyces_griseus_subsp._griseus_NBRC_13350 7 7

Streptomyces_bingchenggensis_BCW-1 9 9

Streptomyces_violaceusniger_Tu_4113 10 10

Streptomyces_avermitilis_MA-4680 6 6

Streptomyces_cattleya_NRRL_8057_=_DSM_46488 10 10

Streptomyces_scabiei_87.22 5 5

Streptomyces_hygroscopicus_subsp._jinggangensis_5008 13 13

Actinosynnema_mirum_DSM_43827 5 5

Saccharomonospora_viridis_DSM_43017 1 1

Pseudonocardia_dioxanivorans_CB1190 5 5

Saccharopolyspora_erythraea_NRRL_2338 10 10

Amycolatopsis_mediterranei_U32 10 10

Kribbella_flavida_DSM_17836 14 14

Nocardioides_sp._JS614 2 2

Microlunatus_phosphovorus_NM-1 3 3

Salinispora_arenicola_CNS-205 4 4

Salinispora_tropica_CNB-440 3 3

Verrucosispora_maris_AB-18-032 4 4

Micromonospora_sp._L5 4 4

Micromonospora_aurantiaca_ATCC_27029 4 4

Actinoplanes_sp._N902-109 5 5

Actinoplanes_sp._SE50/110 6 6

Actinoplanes_missouriensis_431 5 5

Segniliparus_rotundus_DSM_44985 1 1

Tsukamurella_paurometabola_DSM_20162 4 4

Gordonia_bronchialis_DSM_43247 2 2

Rhodococcus_jostii_RHA1 4 4

Rhodococcus_equi_103S 2 2

Rhodococcus_opacus_B4 2 2

Rhodococcus_erythropolis_PR4 4 4

Nocardia_cyriacigeorgica_GUH-2 3 3

Nocardia_farcinica_IFM_10152 2 2

Amycolicicoccus_subflavus_DQS3-9A1 1 1

Mycobacterium_massiliense_str._GO_06 1 1

Mycobacterium_abscessus_ATCC_19977 5 5

Mycobacterium_sp._JLS 1 1

Mycobacterium_intracellulare_ATCC_13950 1 1

Mycobacterium_vanbaalenii_PYR-1 2 2

Mycobacterium_rhodesiae_NBB3 2 2

Mycobacterium_gilvum_PYR-GCK 2 2

Mycobacterium_chubuense_NBB4 3 3

Mycobacterium_smegmatis_str._MC2_155 6 6

Corynebacterium_urealyticum_DSM_7109 1 1

Corynebacterium_glutamicum_R 1 1

Sanguibacter_keddieii_DSM_10542 2 2

Kytococcus_sedentarius_DSM_20547 2 2

Beutenbergia_cavernae_DSM_12333 1 1

Leifsonia_xyli_subsp._xyli_str._CTCB07 2 2

Microbacterium_testaceum_StLB037 2 2

Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 4 4

Intrasporangium_calvum_DSM_43043 1 1

Isoptericola_variabilis_225 1 1

Cellulomonas_flavigena_DSM_20109 1 1

[Cellvibrio]_gilvus_ATCC_13127 1 1

Arthrobacter_phenanthrenivorans_Sphe3 1 1

Arthrobacter_chlorophenolicus_A6 1 1

Arthrobacter_aurescens_TC1 2 2

Arthrobacter_arilaitensis_Re117 2 2

Kocuria_rhizophila_DC2201 1 1

Arthrobacter_sp._Rue61a 1 1

Arthrobacter_sp._FB24 1 1

Renibacterium_salmoninarum_ATCC_33209 1 1

Micrococcus_luteus_NCTC_2665 1 1

Caldilinea_aerophila_DSM_14535_=_NBRC_104270 1 1

Sphaerobacter_thermophilus_DSM_20745 1 1

Deinococcus_proteolyticus_MRP 1 1

Clostridium_cellulolyticum_H10 1 1

Ruminococcus_albus_7 1 1

Pelotomaculum_thermopropionicum_SI 1 1

Eubacterium_limosum_KIST612 1 1

Clostridium_saccharolyticum_WM1 1 1

Clostridium_ljungdahlii_DSM_13528 1 1

Thermoanaerobacter_sp._X514 1 1

Kyrpidia_tusciae_DSM_2912 1 1

Brevibacillus_brevis_NBRC_100599 1 1

Paenibacillus_mucilaginosus_3016 2 2

Bacillus_sp._JS 1 1

Bacillus_atrophaeus_1942 1 1

Bacillus_thuringiensis_str._Al_Hakam 2 2

Bacillus_cereus_03BB102 2 2

Bacillus_anthracis_str._A0248 2 2

Bacillus_clausii_KSM-K16 1 1

Bacillus_megaterium_DSM_319 1 1

Gemmatimonas_aurantiaca_T-27 1 1

Chitinophaga_pinensis_DSM_2588 1 1

Fibrella_aestuarina 1 1

Granulicella_tundricola_MP5ACTX9 1 1

Granulicella_mallensis_MP5ACTX8 2 2

Terriglobus_saanensis_SP1PR4 1 1

Candidatus_Nitrospira_defluvii 1 1

Anaeromyxobacter_sp._Fw109-5 1 1

Anaeromyxobacter_dehalogenans_2CP-1 1 1

Burkholderia_phytofirmans_PsJN 1 1

Burkholderia_phymatum_STM815 1 1

Ralstonia_pickettii_12D 1 1

Ralstonia_solanacearum_CFBP2957 1 1

Burkholderia_sp._RPE64 1 1

Burkholderia_sp._CCGE1002 1 1

Burkholderia_ambifaria_AMMD 3 3

Burkholderia_cenocepacia_HI2424 2 2

Burkholderia_multivorans_ATCC_17616 1 1

Burkholderia_gladioli_BSR3 1 1

Advenella_kashmirensis_WT001 2 2

Bordetella_petrii_DSM_12804 1 1

Bordetella_pertussis_Tohama_I 1 1

Bordetella_parapertussis_12822 1 1

Bordetella_bronchiseptica_RB50 1 1

Achromobacter_xylosoxidans_A8 2 2

Achromobacter_xylosoxidans 1 1

Caulobacter_sp._K31 1 1

Jannaschia_sp._CCS1 1 1

Ruegeria_pomeroyi_DSS-3 1 1

Rhodospirillum_photometricum_DSM_122 1 1

Rhodospirillum_rubrum_F11 1 1

Xanthobacter_autotrophicus_Py2 1 1

Methylobacterium_nodulans_ORS_2060 1 1

Sinorhizobium_fredii_NGR234 2 2

Sinorhizobium_medicae_WSM419 1 1

Sinorhizobium_meliloti_AK83 1 1

Genome_sequence_of_Rhizobium_sp._strain_IRBG74 2 2

Rhizobium_etli_CIAT_652 2 2

Rhizobium_leguminosarum_bv._viciae_3841 1 1

Agrobacterium_tumefaciens_str._C58 1 1

Agrobacterium_radiobacter_K84 1 1

Agrobacterium_sp._H13-3 2 2

Mesorhizobium_sp._BNC1 1 1

Mesorhizobium_opportunistum_WSM2075 1 1

Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 2 2

Mesorhizobium_loti_MAFF303099 2 2

Methylocella_silvestris_BL2 1 1

Hyphomicrobium_sp._MC1 2 2

Bradyrhizobium_japonicum_USDA_110 1 1

Idiomarina_loihiensis_L2TR 1 1

Chromohalobacter_salexigens_DSM_3043 1 1

Rhodanobacter_denitrificans 1 1

Frateuria_aurantia_DSM_6220 1 1

Pectobacterium_wasabiae_WPP163 1 1

Pectobacterium_sp._SCC3193 1 1

Pectobacterium_atrosepticum_SCRI1043 1 1

Pectobacterium_carotovorum_subsp._carotovorum_PC1 1 1

Pantoea_vagans_C9-1 1 1

Pantoea_ananatis_LMG_20103 1 1

Enterobacter_sp._R4-368 1 1

Enterobacter_sp._638 1 1

Enterobacter_cloacae_subsp._dissolvens_SDM 1 1

Azotobacter_vinelandii_DJ 1 1

Pseudomonas_sp._UW4 1 1

Pseudomonas_fluorescens_SBW25 2 2

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Others
Genome Number Proteins

NCBI_plasmid_sequences_(Plasmids) 30 30

Protein_Data_Bank_(all_PDB_sequenc) 1 1

PDB_chains_(SCOP_1.75)_(PDB) 1 1

SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 5 5

TargetDB__(Targets) 12 12

STRING_v9.0.5_(STRING) 255 255

Uniprot_2018_03_genome 9720 9705

NCBI_2017_08_genome 26641 26623

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Domain combinations for Jann2411-like superfamily in groups of genomes