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Home > SCOP hierarchy > Api92-like > Domain combinations

Domain combinations for Api92-like superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Api92-like domain in that genome.

Complete genomes
Genome Number Proteins

Amphimedon_queenslandica 1 1

Eubacterium_siraeum 1 1

Ruminococcus_albus_7 1 1

Clostridium_kluyveri_DSM_555 1 1

Deferribacter_desulfuricans_SSM1 1 1

Neisseria_gonorrhoeae_NCCP11945 1 1

Gallibacterium_anatis_UMN179 1 1

Haemophilus_ducreyi_35000HP 1 1

Photorhabdus_asymbiotica 1 1

Photorhabdus_luminescens_subsp._laumondii_TTO1 2 2

Xenorhabdus_bovienii_SS-2004 2 2

Xenorhabdus_nematophila_ATCC_19061 2 2

Proteus_mirabilis_HI4320 1 1

Edwardsiella_ictaluri_93-146 1 1

Yersinia_pseudotuberculosis_IP_31758 1 1

Yersinia_enterocolitica_subsp._enterocolitica_8081 1 1

Serratia_sp._ATCC_39006 1 1

Serratia_proteamaculans_568 3 3

Pantoea_sp._At-9b 1 1

Erwinia_sp._Ejp617 2 2

Erwinia_billingiae_Eb661 1 1

Erwinia_pyrifoliae_Ep1/96 2 2

Erwinia_amylovora_ATCC_49946 1 1

Shigella_dysenteriae_Sd197 1 1

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Strains
Genome Number Proteins

Clostridium_kluyveri_NBRC_12016 1 1

Acidithiobacillus_ferrooxidans_ATCC_23270 1 1

Yersinia_pestis_Z176003 1 1

Serratia_plymuthica_S13 1 1

Pantoea_ananatis_LMG_5342 1 1

Pantoea_ananatis_PA13 1 1

Pantoea_ananatis_AJ13355 1 1

Erwinia_pyrifoliae_DSM_12163 2 2

Shigella_flexneri_2002017 1 1

Shigella_flexneri_2a_str._301 1 1

Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 1 1

Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 1 1

Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 1 1

Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 1 1

Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 1 1

Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 1 1

Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 1 1

Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 1 1

Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 1 1

Escherichia_coli_E24377A 4 4

Escherichia_coli_E._coli_PMV-1 2 2

Escherichia_coli_O104:H4_str._2011C-3493 1 1

Escherichia_coli_UM146 1 1

Escherichia_coli_Xuzhou21 1 1

Escherichia_coli_UMNK88 3 3

Escherichia_coli_KO11FL 1 1

Escherichia_coli_KO11FL 1 1

Escherichia_coli_ED1a 2 2

Escherichia_coli_UMN026 1 1

Escherichia_coli_W 1 1

Escherichia_coli_W 1 1

Escherichia_coli_SE15 1 1

Escherichia_coli_SE11 2 2

Escherichia_coli_UTI89 1 1

Escherichia_coli_ETEC_H10407 2 2

Escherichia_coli_O55:H7_str._RM12579 1 1

Escherichia_coli_O55:H7_str._CB9615 1 1

Escherichia_coli_O26:H11_str._11368 2 2

Escherichia_coli_O157:H7_str._TW14359 1 1

Escherichia_coli_O157:H7_str._EC4115 1 1

Escherichia_coli_O157:H7_str._Sakai 1 1

Escherichia_coli_O157:H7_str._EDL933 1 1

Enterobacter_cloacae_subsp._cloacae_ATCC_13047 1 1

Pseudomonas_fluorescens_A506 1 1

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Others
Genome Number Proteins

NCBI_plasmid_sequences_(Plasmids) 113 113

PDB_chains_(SCOP_1.75)_(PDB) 1 1

Protein_Data_Bank_(all_PDB_sequenc) 1 1

SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 7 5

TargetDB__(Targets) 2 2

STRING_v9.0.5_(STRING) 38 38

UniProt__viral_sequences_(Viral) 2 2

NCBI_viral_sequences_(Viral) 2 2

Uniprot_2018_03_genome 821 821

NCBI_2017_08_genome 8539 8537

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