SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for PH0156-like superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a PH0156-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Nostoc_sp._PCC_7524 1 1
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 1 1
Desulfotomaculum_kuznetsovii_DSM_6115 1 1
Butyrivibrio_proteoclasticus_B316 1 1
Caldicellulosiruptor_bescii_DSM_6725 1 1
Thermodesulfobium_narugense_DSM_14796 1 1
Kyrpidia_tusciae_DSM_2912 1 1
Brachyspira_intermedia_PWS/A 1 1
Sulfurihydrogenibium_sp._YO3AOP1 1 1
Helicobacter_cetorum_MIT_00-7128 1 1
Desulfatibacillum_alkenivorans_AK-01 1 1
Thermofilum_sp._1910b 1 1
Vulcanisaeta_distributa_DSM_14429 1 1
Pyrobaculum_calidifontis_JCM_11548 1 1
Thermoproteus_neutrophilus_V24Sta 1 1
Pyrobaculum_islandicum_DSM_4184 1 1
Thermococcus_sp._4557 1 1
Thermococcus_onnurineus_NA1 1 1
Thermococcus_kodakarensis_KOD1 2 2
Thermococcus_gammatolerans_EJ3 1 1
Thermococcus_sibiricus_MM_739 1 1
Thermococcus_barophilus_MP 1 1
Pyrococcus_horikoshii_OT3 1 1
Methanotorris_igneus_Kol_5 2 2
Methanocaldococcus_vulcanius_M7 1 1
Methanocaldococcus_jannaschii_DSM_2661 1 1

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Strains
Genome     Number   Proteins
Oscillatoria_nigro-viridis_PCC_7112 1 1
Oscillatoria_acuminata_PCC_6304 1 1
Cyanothece_sp._PCC_7425 1 1
Cyanothece_sp._PCC_7424 1 1
Cyanothece_sp._ATCC_51142 1 1
Helicobacter_pylori_Aklavik86 1 1
Helicobacter_pylori_SNT49 1 1
Helicobacter_pylori_HPAG1 1 1
Cronobacter_sakazakii_ATCC_BAA-894 1 1
Archaeoglobus_sulfaticallidus_PM70-1 1 1
Thermococcus_sp._AM4 1 1
Thermococcus_sp._CL1 1 1
Thermococcus_litoralis_DSM_5473 3 3
Pyrococcus_sp._NA2 1 1

Others
Genome     Number   Proteins
NCBI_plasmid_sequences_(Plasmids) 1 1
PDB_chains_(SCOP_1.75)_(PDB) 1 1
TargetDB__(Targets) 1 1
Protein_Data_Bank_(all_PDB_sequenc) 2 2
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 10 10
STRING_v9.0.5_(STRING) 19 19
Uniprot_2018_03_genome 240 240
NCBI_2017_08_genome 419 419

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