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Domain combinations for Acyl-CoA binding protein superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Acyl-CoA binding protein domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   32 32
Pan_troglodytes_76_2.1.4   (Chimpanzee)   7 7
Gorilla_gorilla_76_3.1   (Western gorilla)   10 10
Pongo_abelii_76_2   (Sumatran orangutan)   9 9
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   7 7
Papio_anubis_76   (Olive baboon)   8 8
Macaca_mulatta_76_1   (Rhesus monkey)   16 16
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   18 18
Otolemur_garnettii_76_3   (Small-eared galago)   6 6
Microcebus_murinus_76_1   (Gray mouse lemur)   6 6
Rattus_norvegicus_76_5.0   (Norway rat)   11 11
Mus_musculus_76_38   (House mouse)   31 31
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   7 7
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   8 8
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   13 12
Cavia_porcellus_76_3   (Domestic guinea pig)   8 8
Oryctolagus_cuniculus_76_2   (Rabbit)   8 8
Ochotona_princeps_76   (American pika)   7 7
Tupaia_belangeri_76   (Northern tree shrew)   5 5
Sus_scrofa_76_10.2   (Pig)   7 7
Bos_taurus_76_3.1   (Cattle)   10 10
Ovis_aries_76_3.1   (Sheep)   8 8
Vicugna_pacos_76_1   (Alpaca)   7 7
Tursiops_truncatus_76_1   (Bottlenose dolphin)   7 7
Mustela_putorius_furo_76_1.0   (Domestic ferret)   7 7
Ailuropoda_melanoleuca_76_1   (Giant panda)   9 9
Canis_familiaris_76_3.1   (Dog)   10 10
Felis_catus_76_6.2   (Domestic cat)   7 7
Equus_caballus_76_2   (Horse)   8 8
Myotis_lucifugus_76_2.0   (Little brown bat)   9 9
Pteropus_vampyrus_76_1   (Large flying fox)   6 6
Sorex_araneus_76_1   (European shrew)   2 2
Erinaceus_europaeus_76   (Western European hedgehog)   7 7
Procavia_capensis_76_1   (Cape rock hyrax)   6 6
Loxodonta_africana_76_3   (African savanna elephant)   9 9
Echinops_telfairi_76   (Small Madagascar hedgehog)   9 9
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   7 7
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   8 8
Macropus_eugenii_76_1.0   (Tammar wallaby)   6 6
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   10 10
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   8 8
Ornithorhynchus_anatinus_76_5   (Platypus)   4 4
Saccoglossus_kowalevskii_v3.0 8 8
Petromyzon_marinus_76_7.0   (Sea lamprey)   5 5
Meleagris_gallopavo_76_2   (Turkey)   7 7
Gallus_gallus_76_4   (Chicken)   6 6
Anas_platyrhynchos_76_1.0   (Mallard)   6 6
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   6 6
Ficedula_albicollis_76_1.0   (Collared flycatcher)   8 8
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   7 7
Anolis_carolinensis_76_2.0   (Green anole)   7 7
Xenopus_laevis_   (African clawed frog)   16 16
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   9 9
Latimeria_chalumnae_76_1   (Coelacanth)   6 6
Lepisosteus_oculatus_76   (Spotted gar)   8 8
Gadus_morhua_76_1   (Atlantic cod)   8 8
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   6 6
Takifugu_rubripes_76_4   (Torafugu)   15 15
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   15 15
Oryzias_latipes_76_1   (Japanese medaka)   10 10
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   6 6
Poecilia_formosa_76   (Amazon molly)   10 10
Oreochromis_niloticus_76_1.0   (Nile tilapia)   10 10
Astyanax_mexicanus_76   (Mexican tetra)   9 9
Danio_rerio_76_9   (Zebrafish)   23 23
Oikopleura_dioica 2 2
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   6 6
Ciona_intestinalis_76   (Vase tunicate)   6 6
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   6 6
Adineta_vaga 15 15
Octopus_bimaculoides_280 5 5
Crassostrea_gigas_22   (Pacific oyster)   4 4
Lottia_gigantea_   (Owl limpet)   5 5
Helobdella_robusta_ 6 6
Capitella_sp._I_ 8 8
Danaus_plexippus_OGS1.0   (Monarch butterfly)   6 6
Heliconius_melpomene_   (Postman butterfly)   5 4
Bombyx_mori_   (Domestic silkworm)   6 6
Nasonia_vitripennis_   (Jewel wasp)   4 4
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   4 4
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   5 5
Linepithema_humile_v1.1   (Argentine ant)   6 6
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   4 4
Solenopsis_invicta_v.2.2.3   (Red fire ant)   3 3
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   5 5
Atta_cephalotes_v1.1 5 5
Camponotus_floridanus_v3.3   (Florida carpenter ant)   5 5
Lucilia_cuprina   (Australian sheep blowfly)   11 9
Drosophila_grimshawi_1.3 11 11
Drosophila_willistoni_1.3 9 9
Drosophila_pseudoobscura_2.13 9 9
Drosophila_persimilis_1.3 8 8
Drosophila_suzukii 8 8
Drosophila_yakuba_1.3 9 9
Drosophila_simulans_1.3 9 9
Drosophila_sechellia_1.3 9 9
Drosophila_melanogaster_76_5   (Fruit fly)   13 13
Drosophila_erecta_1.3 9 9
Drosophila_ananassae_1.3 9 9
Drosophila_virilis_1.2 9 9
Drosophila_mojavensis_1.3 6 6
Megaselia_scalaris_22 1 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   6 6
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   5 5
Anopheles_darlingi_22   (American malaria mosquito)   5 5
Anopheles_gambiae_49_3j   (African malaria mosquito)   6 6
Tribolium_castaneum_3.0   (Red flour beetle)   5 5
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   5 5
Acyrthosiphon_pisum_   (Pea aphid)   5 5
Rhodnius_prolixus_22 4 4
Daphnia_pulex_   (Common water flea)   13 13
Strigamia_maritima_22 4 4
Sarcoptes_scabiei 3 3
Tetranychus_urticae_   (Two-spotted spider mite)   3 3
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   3 3
Pristionchus_pacificus_ 12 10
Meloidogyne_incognita_   (Southern root-knot nematode)   2 2
Meloidogyne_hapla_ 2 2
Onchocerca_volvulus_22 9 9
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   10 10
Caenorhabditis_japonica_ 7 7
Caenorhabditis_brenneri_ 9 9
Caenorhabditis_remanei_ 10 10
Caenorhabditis_elegans_76_235   (Roundworm)   12 12
Caenorhabditis_briggsae_2 13 13
Trichinella_spiralis_22 3 3
Hymenolepis_microstoma_ 4 4
Echinococcus_multilocularis_ 3 3
Echinococcus_granulosus_ 3 3
Taenia_solium_   (Pork tapeworm)   4 4
Schistosoma_mansoni_ 3 3
Mnemiopsis_leidyi   (Sea walnut)   5 5
Acropora_digitifera_v1.0 5 5
Nematostella_vectensis_1.0   (Starlet sea anemone)   7 7
Hydra_vulgaris 5 5
Amphimedon_queenslandica 4 4
Trichoplax_adhaerens_ 2 2
Proterospongia_sp._ATCC_50818_ 2 2
Monosiga_brevicollis_ 3 3
Sphaeroforma_arctica_JP610_ 2 2
Capsaspora_owczarzaki_ATCC_30864_ 4 4
Conidiobolus_coronatus_NRRL28638_v1.0 3 3
Mortierella_verticillata_NRRL_6337_ 3 3
Phycomyces_blakesleeanus_ 6 6
Rhizopus_oryzae_RA_99-880_ 3 3
Mucor_circinelloides_ 8 8
Rhizomucor_miehei_CAU432_ 6 6
Malassezia_globosa_CBS_7966_ 4 4
Sporisorium_reilianum_22 2 2
Ustilago_maydis_ 2 2
Mixia_osmundae_IAM_14324_v1.0 2 2
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 3 3
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 3 2
Melampsora_laricis-populina_ 3 3
Rhodotorula_graminis_WP1_v1.0 2 2
Sporobolomyces_roseus_IAM_13481_ 2 2
Microbotryum_violaceum_22 4 4
Wallemia_sebi_v1.0 2 2
Sphaerobolus_stellatus_v1.0 3 3
Piloderma_croceum_F_1598_v1.0 2 2
Serpula_lacrymans_var._lacrymans_S7.9_ 3 3
Coniophora_puteana 2 2
Hydnomerulius_pinastri_v2.0 3 3
Paxillus_rubicundulus_Ve08.2h10_v1.0 3 3
Pisolithus_microcarpus_441_v1.0 2 2
Pisolithus_tinctorius_Marx_270_v1.0 3 3
Scleroderma_citrinum_Foug_A_v1.0 3 3
Coprinopsis_cinerea_okayama7_130_v3 3 3
Pleurotus_ostreatus_   (Oyster mushroom)   3 3
Amanita_thiersii_Skay4041_v1.0 3 3
Amanita_muscaria_Koide_v1.0   (Fly agaric)   3 3
Galerina_marginata_v1.0 3 3
Hebeloma_cylindrosporum_h7_v2.0 3 3
Laccaria_bicolor_S238N-H82_ 3 3
Agaricus_bisporus_var._bisporus_ 3 3
Schizophyllum_commune_ 3 3
Stereum_hirsutum_FP-91666_SS1__v1.0 3 3
Heterobasidion_annosum_ 3 3
Gloeophyllum_trabeumv1.0 3 3
Punctularia_strigosozonata_v1.0 3 3
Sebacina_vermifera_MAFF_305830_v1.0 5 5
Fomitiporia_mediterranea_v1.0 2 2
Tulasnella_calospora_AL13/4D_v1.0 3 3
Postia_placenta_ 3 3
Wolfiporia_cocos_MD-104_SS10__v1.0 3 3
Fomitopsis_pinicolav1.0 4 4
Fomitopsis_pinicola_FP-58527_SS1_v3.0 4 4
Phanerochaete_chrysosporium_RP-78_2.1 3 3
Dichomitus_squalens 2 2
Trametes_versicolor_v1.0 3 3
Tremella_mesenterica_   (Witches' butter)   3 3
Daldinia_eschscholzii_EC12_v1.0 2 2
Apiospora_montagnei_NRRL_25634_v1.0 2 2
Magnaporthe_poae_ATCC_64411_22 2 2
Magnaporthe_grisea_70-15_ 2 2
Podospora_anserina_ 1 1
Sporotrichum_thermophile_ATCC_42464_ 2 2
Thielavia_terrestris_NRRL_8126_ 2 2
Chaetomium_globosum_CBS_148.51_ 2 2
Neurospora_tetrasperma_ 2 2
Neurospora_discreta_FGSC_8579_ 2 2
Neurospora_crassa_OR74A_ 2 2
Cryphonectria_parasitica_   (Chestnut blight fungus)   2 2
Verticillium_albo-atrum_VaMs.102_ 2 2
Verticillium_dahliae_VdLs.17_ 2 2
Acremonium_alcalophilumv_1.0 2 2
Glomerella_graminicola_22 2 2
Fusarium_graminearum_ 2 2
Nectria_haematococca_mpVI_ 2 2
Fusarium_oxysporum_f._sp._lycopersici_4286_ 2 2
Fusarium_verticillioides_7600_ 2 2
Trichoderma_asperellum_CBS_433.97_v1.0 2 2
Trichoderma_atroviride_ 2 2
Trichoderma_citrinoviride_v1.0 2 2
Trichoderma_reesei_1.2 2 2
Trichoderma_virens_Gv29-8_ 2 2
Trichoderma_longibrachiatum_ATCC_18648_v1.0 2 2
Trichoderma_harzianum_CBS_226.95_v1.0 2 2
Amorphotheca_resinae_v1.0   (Creosote fungus)   2 2
Botrytis_cinerea_B05.10_ 2 2
Sclerotinia_sclerotiorum_ 2 2
Blumeria_graminis_22 2 2
Didymella_exigua_CBS_183.55_v1.0 2 2
Leptosphaeria_maculans_22 1 1
Setosphaeria_turcica_v1.0 2 2
Cochliobolus_miyabeanus_ATCC_44560_v1.0 2 2
Cochliobolus_victoriae_FI3_v1.0 2 2
Cochliobolus_carbonum_26-R-13_v1.0 2 2
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   2 2
Alternaria_brassicicola_ 2 2
Cochliobolus_lunatus_m118_v2.0 2 2
Pyrenophora_teres_f._teres_22 2 2
Pyrenophora_tritici-repentis_ 2 2
Stagonospora_nodorum_ 2 2
Mycosphaerella_graminicola_IPO323_ 2 2
Zasmidium_cellare_ATCC_36951_v1.0 2 2
Dothistroma_septosporum 2 2
Septoria_musiva_v1.0 2 2
Mycosphaerella_fijiensis_CIRAD86_ 2 2
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 2 2
Paracoccidioides_brasiliensis_Pb18_ 2 2
Coccidioides_posadasii_RMSCC_3488_ 2 2
Coccidioides_immitis_RS_ 2 2
Ajellomyces_dermatitidis_SLH14081_ 2 2
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 2 2
Microsporum_canis_CBS_113480_ 2 2
Trichophyton_equinum_CBS_127.97_ 2 2
Trichophyton_verrucosum_HKI_0517_ 1 1
Arthroderma_benhamiae_CBS_112371_ 1 1
Trichophyton_tonsurans_CBS_112818_ 2 2
Trichophyton_rubrum_CBS_118892_ 2 2
Uncinocarpus_reesii_1704_ 1 1
Aspergillus_zonatus_v1.0 2 2
Penicillium_chrysogenum_Wisconsin_54-1255_ 2 2
Penicillium_chrysogenum_v1.0 2 2
Aspergillus_acidus_v1.0 2 2
Aspergillus_fumigatus_Af293 2 2
Aspergillus_brasiliensis_v1.0 3 3
Aspergillus_nidulans_FGSC_A4_ 2 2
Aspergillus_sydowii_v1.0 2 2
Aspergillus_versicolor_v1.0 2 2
Aspergillus_glaucus 2 2
Aspergillus_carbonarius_ITEM_5010_ 2 2
Neosartorya_fischeri_NRRL_181_ 2 2
Aspergillus_terreus_NIH2624_ 2 2
Aspergillus_tubingensis_v1.0 2 2
Aspergillus_wentii_v1.0 3 3
Aspergillus_oryzae_RIB40_ 1 1
Aspergillus_niger_22 3 3
Aspergillus_niger_ATCC_1015_ 1 1
Aspergillus_flavus_NRRL3357_ 2 2
Aspergillus_clavatus_NRRL_1_ 2 2
Penicillium_marneffei_ATCC_18224_ 3 3
Tuber_melanosporum_Mel28_22 2 2
Tuber_melanosporum_Vittad_   (Perigord truffle)   2 2
Hansenula_polymorpha_v2.0 2 2
Dekkera_bruxellensis_CBS_2499_v2.0 2 2
Pichia_membranifaciensv1.0 2 2
Candida_tanzawaensis_NRRL_Y-17324__v1.0 2 2
Candida_dubliniensis_CD36_ 2 2
Candida_tropicalis_MYA-3404_ 1 1
Candida_parapsilosis_ 1 1
Candida_albicans_SC5314 2 2
Lodderomyces_elongisporus_NRRL_YB-4239_ 2 2
Babjeviella_inositovora_NRRL_Y-12698_v1.0 2 2
Pichia_stipitis_CBS_6054_ 2 2
Candida_guilliermondii_ATCC_6260_ 1 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 2 2
Debaromyces_hansenii 2 2
Wickerhamomyces_anomalus 2 2
Pichia_pastoris_GS115_ 2 2
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 2 2
Yarrowia_lipolytica_CLIB122 2 2
Candida_lusitaniae_ATCC_42720_ 1 1
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 2 2
Vanderwaltozyma_polyspora_DSM_70294_ 1 1
Candida_glabrata_CBS138 1 1
Kluyveromyces_thermotolerans_CBS_6340 2 2
Lachancea_kluyveri_ 2 2
Kluyveromyces_waltii 2 2
Ashbya_gossypii_ATCC_10895_ 2 2
Zygosaccharomyces_rouxii_ 1 1
Saccharomyces_mikatae_MIT 1 1
Saccharomyces_paradoxus_MIT 1 1
Saccharomyces_cerevisiae_76   (Baker's yeast)   1 1
Saccharomyces_bayanus_MIT 1 1
Kluyveromyces_lactis 2 2
Schizosaccharomyces_cryophilus_OY26_22 1 1
Schizosaccharomyces_octosporus_yFS286_ 1 1
Schizosaccharomyces_pombe   (Fission yeast)   1 1
Catenaria_anguillulae_PL171_v1.0 2 2
Allomyces_macrogynus_ATCC_38327_ 4 4
Spizellomyces_punctatus_DAOM_BR117_ 4 4
Dictyostelium_discoideum 2 2
Dictyostelium_purpureum_ 2 2
Selaginella_moellendorffii_ 5 5
Pinus_taeda   (Loblolly pine)   8 8
Picea_abies   (Norway spruce)   4 4
Eucalyptus_grandis_v201   (Rose gum)   9 9
Theobroma_cacao_B97-61/B2_v1   (Cacao)   7 7
Gossypium_raimondii_v221 30 30
Citrus_clementina_v165 12 12
Citrus_sinensis_v154   (Sweet orange)   13 13
Thellungiella_halophila_v173 8 8
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   13 13
Capsella_rubella_v183 6 6
Arabidopsis_lyrata_   (Lyrate rockcress)   5 5
Arabidopsis_thaliana_10   (Thale cress)   12 12
Carica_papaya_   (Papaya)   4 4
Medicago_truncatula_   (Barrel medic)   5 5
Phaseolus_vulgaris_v186   (French bean)   6 6
Glycine_max_v109   (Soybean)   12 12
Cucumis_sativus_v122   (Cucumber)   6 6
Fragaria_vesca_   (Wild strawberry)   5 5
Malus_domestica_v196   (Apple)   9 9
Prunus_persica_v139   (Peach)   6 6
Linum_usitatissimum_v200   (Flax)   11 11
Manihot_esculenta_v147   (Cassava)   8 8
Populus_trichocarpa_v156   (Black cottonwood)   11 11
Vitis_vinifera_   (Wine grape)   6 6
Mimulus_guttatus_v140   (Spotted monkey flower)   9 9
Solanum_lycopersicum_v.2.3   (Tomato)   4 4
Solanum_tuberosum_   (Potato)   7 7
Actinidia_chinensis_Hongyang_ 13 13
Aquilegia_coerulea_v195 16 16
Triticum_urartu_22 4 4
Triticum_aestivum_22   (Bread wheat)   14 14
Aegilops_tauschii_22 6 5
Brachypodium_distachyon_   (Stiff brome)   8 8
Oryza_barthii_22   (African wild rice)   6 6
Oryza_meridionalis_22 4 4
Oryza_glumaepatula_22 5 5
Oryza_glaberrima   (African rice)   5 5
Oryza_punctata_22 6 6
Oryza_nivara_22 4 4
Oryza_brachyantha_22   (Malo sina)   5 5
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   9 9
Oryza_sativa_v193   (Rice)   8 8
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   9 9
Panicum_virgatum_v202   (Switchgrass)   14 14
Setaria_italica_v164   (Foxtail millet)   13 13
Zea_mays_subsp._mays_   (Maize)   19 19
Zea_mays_v181   (Maize)   20 20
Sorghum_bicolor_   (Sorghum)   5 5
Musa_balbisiana   (Balbis banana)   10 10
Musa_acuminata_22   (Wild Malaysian banana)   10 10
Amborella_trichopoda_22 6 6
Physcomitrella_patens 9 9
Coccomyxa_subellipsoidea_sp._C-169_v2 4 4
Asterochloris_sp._Cgr/DA1pho_v1.0 4 4
Chlorella_variabilis_sp._NC64A_ 5 5
Chlorella_vulgaris_ 4 4
Volvox_carteri_f._nagariensis_ 3 3
Volvox_carteri_v199 3 3
Chlamydomonas_reinhardtii_4.0 4 4
Ostreococcus_sp._RCC809_ 6 6
Ostreococcus_lucimarinus_CCE9901_ 4 4
Ostreococcus_tauri_ 4 4
Bathycoccus_prasinos_ 7 7
Micromonas_sp._RCC299_ 4 4
Micromonas_pusilla_CCMP1545_v3.0 8 8
Cyanidioschyzon_merolae_strain_10D_22 1 1
Cyanidioschyzon_merolae 1 1
Porphyridium_purpureum_02_2012 3 3
Thecamonas_trahens_ATCC_50062_ 5 5
Bigelowiella_natans_CCMP2755_22 4 4
Cyanophora_paradoxa_ 7 7
Leishmania_mexicana_2.4 7 6
Leishmania_major_strain_Friedlin_ 7 6
Leishmania_infantum_JPCM5_2.4 7 6
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 7 6
Trypanosoma_vivax_ 4 4
Trypanosoma_cruzi_strain_CL_Brener 7 7
Trypanosoma_congolense_2.4 2 2
Trypanosoma_brucei_gambiense_v4.1 4 4
Trypanosoma_brucei_TREU927_v4.1 4 4
Ectocarpus_siliculosus 4 4
Aureococcus_anophagefferens_ 2 2
Albugo_laibachii_22 2 2
Pythium_iwayamai_DAOM_BR242034_22 5 5
Pythium_arrhenomanes_ATCC_12531_22 3 3
Pythium_ultimum_v1.7-2 6 6
Pythium_aphanidermatum_DAOM_BR444_22 5 5
Pythium_irregulare_DAOM_BR486_22 6 6
Pythium_vexans_DAOM_BR484_22 6 6
Phytophthora_ramorum_1.1   (Sudden oak death agent)   6 6
Phytophthora_sojae_1.1 6 6
Phytophthora_infestans_T30-4_ 7 7
Phytophthora_capsici_ 6 6
Hyaloperonospora_arabidopsidis_22 4 4
Phaeodactylum_tricornutumCCAP_1055/1 2 2
Fragilariopsis_cylindrus 3 3
Thalassiosira_pseudonana_CCMP1335 3 3
Perkinsus_marinus_ATCC_50983_ 3 3
Paramecium_tetraurelia_ 4 4
Tetrahymena_thermophila_SB210_1_ 3 3
Ichthyophthirius_multifiliis_strain_G5_ 2 2
Cryptosporidium_hominis 1 1
Cryptosporidium_muris 1 1
Cryptosporidium_parvum_Iowa_II 1 1
Neospora_caninum 2 2
Toxoplasma_gondii_VEG 2 2
Toxoplasma_gondii_ME49 3 3
Toxoplasma_gondii_GT1 3 3
Babesia_bovis_T2Bo_ 4 4
Theileria_parva__ 2 2
Theileria_annulata 2 2
Plasmodium_falciparum_3D7_ 6 5
Plasmodium_vivax_SaI-1_7.0 2 2
Plasmodium_knowlesi_strain_H_ 2 2
Plasmodium_yoelii_ssp._yoelii_1_ 2 2
Plasmodium_chabaudi_ 2 2
Plasmodium_berghei_ANKA_ 2 2
Symbiodinium_minutum_clade_B1_v1.2 8 8
Naegleria_gruberi_ 2 2
Guillardia_theta_CCMP2712_v1.0_ 5 5
Emiliania_huxleyi_CCMP1516_ 10 10
Rhodococcus_jostii_RHA1 2 2
Intrasporangium_calvum_DSM_43043 1 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 1 1
Roseiflexus_sp._RS-1 1 1
Roseiflexus_castenholzii_DSM_13941 1 1
Chloroflexus_sp._MS-G 1 1
Chloroflexus_sp._Y-400-fl 1 1
Chloroflexus_aggregans_DSM_9485 1 1
Chloroflexus_aurantiacus_J-10-fl 1 1
Deinococcus_gobiensis_I-0 1 1
Deinococcus_deserti_VCD115 1 1
Deinococcus_maricopensis_DSM_21211 1 1
Deinococcus_geothermalis_DSM_11300 1 1
Deinococcus_proteolyticus_MRP 1 1
Deinococcus_radiodurans_R1 1 1
Niastella_koreensis_GR20-10 1 1
Chitinophaga_pinensis_DSM_2588 1 1
Belliella_baltica_DSM_15883 1 1
Marivirga_tractuosa_DSM_4126 1 1
Cytophaga_hutchinsonii_ATCC_33406 1 1
Owenweeksia_hongkongensis_DSM_17368 1 1
Zunongwangia_profunda_SM-A87 1 1
Krokinobacter_sp._4H-3-7-5 1 1
Gramella_forsetii_KT0803 1 1
Lacinutrix_sp._5H-3-7-4 1 1
Maribacter_sp._HTCC2170 1 1
Robiginitalea_biformata_HTCC2501 1 1
Croceibacter_atlanticus_HTCC2559 1 1
Aequorivita_sublithincola_DSM_14238 1 1
Zobellia_galactanivorans 1 1
Muricauda_ruestringensis_DSM_13258 1 1
Cellulophaga_algicola_DSM_14237 1 1
Cellulophaga_lytica_DSM_7489 1 1
Polaribacter_sp._MED152 1 1
Flavobacterium_indicum_GPTSA100-9 1 1
Flavobacterium_psychrophilum_JIP02/86 1 1
Flavobacterium_branchiophilum_FL-15 1 1
Flavobacterium_columnare_ATCC_49512 1 1
Flavobacterium_johnsoniae_UW101 1 1
Corallococcus_coralloides_DSM_2259 1 1
Pseudogulbenkiania_sp._NH8B 1 1
Laribacter_hongkongensis_HLHK9 1 1
Chromobacterium_violaceum_ATCC_12472 2 2
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 1 1
Methylibium_petroleiphilum_PM1 1 1
Thiomonas_arsenitoxydans 1 1
Thiomonas_intermedia_K12 1 1
Rubrivivax_gelatinosus_IL144 1 1
Burkholderia_phytofirmans_PsJN 1 1
Burkholderia_phymatum_STM815 1 1
Burkholderia_xenovorans_LB400 1 1
Ralstonia_eutropha_JMP134 1 1
Cupriavidus_taiwanensis_LMG_19424 1 1
Cupriavidus_metallidurans_CH34 1 1
Cupriavidus_necator_N-1 1 1
Ralstonia_eutropha_H16 1 1
Ralstonia_pickettii_12D 1 1
Ralstonia_solanacearum_CFBP2957 1 1
Burkholderia_sp._RPE64 1 1
Burkholderia_sp._CCGE1002 1 1
Burkholderia_thailandensis_E264 1 1
Burkholderia_pseudomallei_1106a 1 1
Burkholderia_mallei_SAVP1 1 1
Burkholderia_ambifaria_AMMD 1 1
Burkholderia_cenocepacia_HI2424 1 1
Burkholderia_multivorans_ATCC_17616 1 1
Burkholderia_vietnamiensis_G4 1 1
Burkholderia_gladioli_BSR3 1 1
Burkholderia_glumae_BGR1 1 1
Alicycliphilus_denitrificans_K601 1 1
Ramlibacter_tataouinensis_TTB310 1 1
Delftia_sp._Cs1-4 1 1
Delftia_acidovorans_SPH-1 1 1
Polaromonas_sp._JS666 1 1
Polaromonas_naphthalenivorans_CJ2 1 1
Variovorax_paradoxus_S110 1 1
Rhodoferax_ferrireducens_T118 1 1
Acidovorax_ebreus_TPSY 1 1
Acidovorax_sp._KKS102 1 1
Acidovorax_sp._JS42 1 1
Acidovorax_citrulli_AAC00-1 1 1
Acidovorax_avenae_subsp._avenae_ATCC_19860 1 1
Comamonas_testosteroni_CNB-2 1 1
Herminiimonas_arsenicoxydans 1 1
Collimonas_fungivorans_Ter331 1 1
Janthinobacterium_sp._Marseille 1 1
Herbaspirillum_seropedicae_SmR1 1 1
Achromobacter_xylosoxidans_A8 1 1
Achromobacter_xylosoxidans 1 1
Photobacterium_profundum_SS9 1 1
Marinobacter_adhaerens_HP15 1 1
Marinobacter_sp._BSs20148 1 1
Marinobacter_hydrocarbonoclasticus_ATCC_49840 1 1
Marinobacter_aquaeolei_VT8 1 1
Hahella_chejuensis_KCTC_2396 1 1
Alcanivorax_borkumensis_SK2 1 1
Rhodanobacter_denitrificans 1 1
Xanthomonas_albilineans_GPE_PC73 1 1
gamma_proteobacterium_HdN1 1 1
Pseudomonas_entomophila_L48 1 1
Francisella_noatunensis_subsp._orientalis_str._Toba_04 1 1
Francisella_sp._TX077308 1 1
Francisella_philomiragia_subsp._philomiragia_ATCC_25017 1 1
Francisella_tularensis_subsp._tularensis_WY96-3418 1 1
Francisella_cf._novicida_3523 1 1
Francisella_novicida_U112 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   19 19
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   12 12
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   6 6
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   9 9
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   10 10
Cryptococcus_neoformans_var._grubii_H99_ 3 3
Cryptococcus_neoformans_B-3501A_ 4 4
Cryptococcus_neoformans_JEC21_ 3 3
Paracoccidioides_brasiliensis_Pb01_ 2 2
Paracoccidioides_brasiliensis_Pb03_ 2 2
Coccidioides_posadasii_str._Silveira_ 2 2
Coccidioides_immitis_RMSCC_3703_ 2 2
Coccidioides_immitis_RMSCC_2394_ 2 2
Coccidioides_immitis_H538.4_ 2 2
Ajellomyces_dermatitidis_ER-3_ 2 2
Histoplasma_capsulatum_H143 2 2
Histoplasma_capsulatum_H88 2 2
Histoplasma_capsulatum_G186AR 2 2
Aspergillus_fumigatus_A1163_ 2 2
Candida_albicans_WO-1_ 2 2
Saccharomyces_cerevisiae_UC5 1 1
Saccharomyces_cerevisiae_PW5 1 1
Saccharomyces_cerevisiae_FL100 1 1
Saccharomyces_cerevisiae_CLIB324 1 1
Saccharomyces_cerevisiae_CBS7960 1 1
Saccharomyces_cerevisiae_YJM269 1 1
Saccharomyces_cerevisiae_T7 1 1
Saccharomyces_cerevisiae_FostersB 1 1
Saccharomyces_cerevisiae_FostersO 1 1
Saccharomyces_cerevisiae_VL3 1 1
Saccharomyces_cerevisiae_Vin13 1 1
Saccharomyces_cerevisiae_LalvinQA23 1 1
Saccharomyces_cerevisiae_AWRI796 1 1
Saccharomyces_cerevisiae_Sigma1278b 1 1
Saccharomyces_cerevisiae_W303 1 1
Saccharomyces_cerevisiae_JAY291 1 1
Saccharomyces_cerevisiae_AWRI1631 1 1
Saccharomyces_cerevisiae_M22 1 1
Saccharomyces_cerevisiae_T73 1 1
Saccharomyces_cerevisiae_CLIB215 1 1
Saccharomyces_cerevisiae_Y10 1 1
Saccharomyces_cerevisiae_YJM789_ 1 1
Saccharomyces_cerevisiae_YJM789 1 1
Saccharomyces_cerevisiae_RM11-1a 1 1
Saccharomyces_cerevisiae_RM11-1a_ 1 1
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   1 1
Schizosaccharomyces_pombe_972h-_ 1 1
Batrachochytrium_dendrobatidis_JEL423_ 2 2
Batrachochytrium_dendrobatidis_JAM81_ 1 1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   6 6
Hordeum_vulgare_22   (Domesticated barley)   3 3
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   6 6
Trypanosoma_brucei_Lister_427_v4.1 4 4
Neospora_caninum_Nc-Liverpool_6.2 2 2
Plasmodium_falciparum_HB3_ 6 5
Plasmodium_falciparum_Dd2_ 3 2
Deinococcus_peraridilitoris_DSM_19664 1 1
Nonlabens_dokdonensis_DSW-6 1 1
Psychroflexus_torquis_ATCC_700755 1 1
Burkholderia_phenoliruptrix_BR3459a 1 1
Pandoraea_pnomenusa_3kgm 1 1
Ralstonia_pickettii_12J 1 1
Ralstonia_solanacearum_FQY_4 1 1
Ralstonia_solanacearum_Po82 1 1
Ralstonia_solanacearum_PSI07 1 1
Ralstonia_solanacearum_CMR15 1 1
Ralstonia_solanacearum_GMI1000 1 1
Burkholderia_sp._YI23 1 1
Burkholderia_sp._CCGE1003 1 1
Burkholderia_sp._CCGE1001 1 1
Burkholderia_sp._KJ006 1 1
Burkholderia_thailandensis_MSMB121 1 1
Burkholderia_pseudomallei_MSHR305 1 1
Burkholderia_pseudomallei_NCTC_13179 1 1
Burkholderia_pseudomallei_BPC006 1 1
Burkholderia_pseudomallei_1026b 1 1
Burkholderia_pseudomallei_MSHR346 1 1
Burkholderia_pseudomallei_668 1 1
Burkholderia_pseudomallei_1710b 1 1
Burkholderia_pseudomallei_K96243 1 1
Burkholderia_mallei_NCTC_10229 1 1
Burkholderia_mallei_NCTC_10247 1 1
Burkholderia_mallei_ATCC_23344 1 1
Burkholderia_lata 1 1
Burkholderia_ambifaria_MC40-6 1 1
Burkholderia_cenocepacia_MC0-3 1 1
Burkholderia_cenocepacia_AU_1054 1 1
Burkholderia_cenocepacia_J2315 1 1
Burkholderia_multivorans_ATCC_17616 1 1
Burkholderia_cepacia_GG4 1 1
Alicycliphilus_denitrificans_BC 1 1
Variovorax_paradoxus_B4 1 1
Variovorax_paradoxus_EPS 1 1
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1 1
Alcanivorax_dieselolei_B5 1 1
Francisella_noatunensis_subsp._orientalis_LADL--07-285A 1 1
Francisella_tularensis_subsp._mediasiatica_FSC147 1 1
Francisella_tularensis_subsp._holarctica_FTNF002-00 1 1
Francisella_tularensis_subsp._holarctica_OSU18 1 1
Francisella_tularensis_subsp._holarctica_LVS 1 1
Francisella_tularensis_subsp._holarctica_FSC200 1 1
Francisella_tularensis_subsp._tularensis_TIGB03 1 1
Francisella_tularensis_subsp._tularensis_TI0902 1 1
Francisella_tularensis_subsp._tularensis_NE061598 1 1
Francisella_tularensis_subsp._tularensis_FSC198 1 1
Francisella_tularensis_subsp._tularensis_SCHU_S4 1 1
Francisella_cf._novicida_Fx1 1 1

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   7 7
Pan_troglodytes_69_2.1.4   (Chimpanzee)   7 7
Gorilla_gorilla_69_3.1   (Western gorilla)   8 8
Pongo_abelii_69_2   (Sumatran orangutan)   7 7
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   7 7
Macaca_mulatta_69_1   (Rhesus monkey)   9 9
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   8 8
Otolemur_garnettii_69_3   (Small-eared galago)   6 6
Microcebus_murinus_69_1   (Gray mouse lemur)   6 6
Rattus_norvegicus_69_3.4   (Norway rat)   9 9
Mus_musculus_69_38   (House mouse)   9 9
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   7 7
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   7 7
Cavia_porcellus_69_3   (Domestic guinea pig)   8 8
Oryctolagus_cuniculus_69_2   (Rabbit)   8 8
Ochotona_princeps_69   (American pika)   7 7
Tupaia_belangeri_69   (Northern tree shrew)   5 5
Sus_scrofa_69_10.2   (Pig)   7 7
Bos_taurus_69_3.1   (Cattle)   8 8
Vicugna_pacos_69_1   (Alpaca)   7 7
Tursiops_truncatus_69_1   (Bottlenose dolphin)   7 7
Mustela_putorius_furo_69_1.0   (Domestic ferret)   7 7
Ailuropoda_melanoleuca_69_1   (Giant panda)   8 8
Canis_familiaris_69_3.1   (Dog)   7 7
Felis_catus_69   (Domestic cat)   6 6
Equus_caballus_69_2   (Horse)   8 8
Myotis_lucifugus_69_2.0   (Little brown bat)   9 9
Pteropus_vampyrus_69_1   (Large flying fox)   6 6
Sorex_araneus_69_1   (European shrew)   2 2
Erinaceus_europaeus_69   (Western European hedgehog)   7 7
Procavia_capensis_69_1   (Cape rock hyrax)   6 6
Loxodonta_africana_69_3   (African savanna elephant)   7 7
Echinops_telfairi_69   (Small Madagascar hedgehog)   9 9
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   7 7
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   8 8
Macropus_eugenii_69_1.0   (Tammar wallaby)   6 6
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   5 5
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   8 8
Ornithorhynchus_anatinus_69_5   (Platypus)   4 4
Petromyzon_marinus_69_7.0   (Sea lamprey)   4 4
Meleagris_gallopavo_69_2   (Turkey)   6 6
Gallus_gallus_69_2   (Chicken)   6 6
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   6 6
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   5 5
Anolis_carolinensis_69_2.0   (Green anole)   7 7
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   6 6
Latimeria_chalumnae_69_1   (Coelacanth)   5 5
Gadus_morhua_69_1   (Atlantic cod)   8 8
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   6 6
Takifugu_rubripes_69_4   (Torafugu)   7 7
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   8 8
Oryzias_latipes_69_1   (Japanese medaka)   8 8
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   6 6
Oreochromis_niloticus_69_1.0   (Nile tilapia)   7 7
Danio_rerio_69_9   (Zebrafish)   9 9
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   4 4
Ciona_intestinalis_69   (Vase tunicate)   6 6
Drosophila_melanogaster_69_5   (Fruit fly)   9 9
Caenorhabditis_elegans_69_215   (Roundworm)   10 10
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   1 1
Arabidopsis_thaliana_10   (Thale cress)   6 6

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   30 30
Homo_sapiens__(NCBI_version)   (Human)   20 20
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   9 9
Heliconius_numata__(Incomplete) 3 3
Loa_loa_v3.3_(Request)   (Eye worm)   7 7
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   6 6
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   8 8
Moniliophthora_perniciosa_FA553__(Genome_survey) 3 3
Picea_sitchensis__(Incomplete)   (Sitka spruce)   2 2
Lotus_japonicus__(Early_assembly) 3 3
Malus_x_domestica_(Duplicate)   (Apple)   9 9
Ricinus_communis__(Early_assembly)   (Castor bean)   4 4
Nicotiana_benthamiana_0.4.4_(Early_draft) 7 7
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   4 4
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   4 4
Phoenix_dactylifera__(Early_draft)   (Date palm)   5 5
NCBI_plasmid_sequences_(Plasmids) 1 1
Uniprot_2018_03_genome 8369 8314
NCBI_2017_08_genome 10398 10380
PDB_chains_(SCOP_1.75)_(PDB) 2 2
Core_Eukaryotic_Genes_458_(CEGMA) 6 6
TargetDB__(Targets) 26 24
Protein_Data_Bank_(all_PDB_sequenc) 36 36
Protozoadb_2010_08_(Protozoadb) 91 85
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 93 93
STRING_v9.0.5_(STRING) 636 634

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