Domain combinations for Kix domain of CBP (creb binding protein) superfamily in groups of genomes

• All genomes
• All eukaryote genomes (domain E)
• All bacterial genomes (domain B+A)
• All eubacterial genomes (domain B)
• All archaeal genomes (domain A)

Groups of genomes may be slower than individual genomes.

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Click on a genome below to view all domain combinations containing a Kix domain of CBP (creb binding protein) domain in that genome.

Complete genomes

Genome		Number	Proteins
Homo_sapiens_76_38	(Human)	4	4
Pan_troglodytes_76_2.1.4	(Chimpanzee)	2	2
Gorilla_gorilla_76_3.1	(Western gorilla)	3	3
Pongo_abelii_76_2	(Sumatran orangutan)	2	2
Nomascus_leucogenys_76_1.0	(Northern white-cheeked gibbon)	2	2
Papio_anubis_76	(Olive baboon)	4	4
Macaca_mulatta_76_1	(Rhesus monkey)	4	4
Callithrix_jacchus_76_3.2.1	(White-tufted-ear marmoset)	3	3
Otolemur_garnettii_76_3	(Small-eared galago)	2	2
Microcebus_murinus_76_1	(Gray mouse lemur)	2	2
Rattus_norvegicus_76_5.0	(Norway rat)	1	1
Mus_musculus_76_38	(House mouse)	3	3
Dipodomys_ordii_76_1	(Ord's kangaroo rat)	2	2
Heterocephalus_glaber_v1.7-2	(Naked mole-rat)	3	3
Cavia_porcellus_76_3	(Domestic guinea pig)	2	2
Oryctolagus_cuniculus_76_2	(Rabbit)	2	2
Ochotona_princeps_76	(American pika)	2	2
Tupaia_belangeri_76	(Northern tree shrew)	1	1
Sus_scrofa_76_10.2	(Pig)	4	4
Bos_taurus_76_3.1	(Cattle)	2	2
Ovis_aries_76_3.1	(Sheep)	2	2
Vicugna_pacos_76_1	(Alpaca)	2	2
Tursiops_truncatus_76_1	(Bottlenose dolphin)	2	2
Mustela_putorius_furo_76_1.0	(Domestic ferret)	2	2
Ailuropoda_melanoleuca_76_1	(Giant panda)	3	3
Canis_familiaris_76_3.1	(Dog)	3	3
Felis_catus_76_6.2	(Domestic cat)	2	2
Equus_caballus_76_2	(Horse)	3	3
Myotis_lucifugus_76_2.0	(Little brown bat)	2	2
Pteropus_vampyrus_76_1	(Large flying fox)	2	2
Sorex_araneus_76_1	(European shrew)	2	2
Erinaceus_europaeus_76	(Western European hedgehog)	2	2
Procavia_capensis_76_1	(Cape rock hyrax)	2	2
Loxodonta_africana_76_3	(African savanna elephant)	3	3
Echinops_telfairi_76	(Small Madagascar hedgehog)	2	2
Dasypus_novemcinctus_76_2	(Nine-banded armadillo)	1	1
Choloepus_hoffmanni_76_1	(Hoffmann's two-fingered sloth)	2	2
Sarcophilus_harrisii_76_7.0	(Tasmanian devil)	3	3
Monodelphis_domestica_76_5	(Gray short-tailed opossum)	2	2
Ornithorhynchus_anatinus_76_5	(Platypus)	3	3
Saccoglossus_kowalevskii_v3.0		3	3
Petromyzon_marinus_76_7.0	(Sea lamprey)	1	1
Meleagris_gallopavo_76_2	(Turkey)	2	2
Gallus_gallus_76_4	(Chicken)	2	2
Anas_platyrhynchos_76_1.0	(Mallard)	2	2
Taeniopygia_guttata_76_3.2.4	(Zebra finch)	2	2
Ficedula_albicollis_76_1.0	(Collared flycatcher)	2	2
Pelodiscus_sinensis_76_1.0	(Chinese soft-shelled turtle)	2	2
Anolis_carolinensis_76_2.0	(Green anole)	2	2
Xenopus_laevis_	(African clawed frog)	3	3
Xenopus_tropicalis_76_4.2	(Tropical clawed frog)	2	2
Latimeria_chalumnae_76_1	(Coelacanth)	3	3
Lepisosteus_oculatus_76	(Spotted gar)	3	3
Gadus_morhua_76_1	(Atlantic cod)	4	4
Tetraodon_nigroviridis_76_8	(Spotted green pufferfish)	6	6
Takifugu_rubripes_76_4	(Torafugu)	16	16
Gasterosteus_aculeatus_76_1	(Three-spined stickleback)	4	4
Oryzias_latipes_76_1	(Japanese medaka)	5	5
Xiphophorus_maculatus_76_4.4.2	(Southern platyfish)	4	4
Poecilia_formosa_76	(Amazon molly)	4	4
Oreochromis_niloticus_76_1.0	(Nile tilapia)	5	5
Astyanax_mexicanus_76	(Mexican tetra)	2	2
Danio_rerio_76_9	(Zebrafish)	7	7
Ciona_savignyi_76_2.0	(Pacific transparent sea squirt)	1	1
Ciona_intestinalis_76	(Vase tunicate)	1	1
Strongylocentrotus_purpuratus_v3.1	(Purple sea urchin)	1	1
Adineta_vaga		6	6
Octopus_bimaculoides_280		1	1
Crassostrea_gigas_22	(Pacific oyster)	4	4
Lottia_gigantea_	(Owl limpet)	1	1
Helobdella_robusta_		4	4
Capitella_sp._I_		2	2
Danaus_plexippus_OGS1.0	(Monarch butterfly)	2	2
Heliconius_melpomene_	(Postman butterfly)	2	2
Nasonia_vitripennis_	(Jewel wasp)	2	2
Apis_mellifera_38.2d_(Not_maintained)	(Honey bee)	4	4
Harpegnathos_saltator_v3.3	(Jerdon's jumping ant)	1	1
Linepithema_humile_v1.1	(Argentine ant)	1	1
Pogonomyrmex_barbatus_v1.2	(Red harvester ant)	1	1
Solenopsis_invicta_v.2.2.3	(Red fire ant)	2	2
Acromyrmex_echinatior_v3.8	(Panamanian leafcutter ant)	1	1
Atta_cephalotes_v1.1		2	2
Camponotus_floridanus_v3.3	(Florida carpenter ant)	1	1
Drosophila_grimshawi_1.3		1	1
Drosophila_willistoni_1.3		1	1
Drosophila_pseudoobscura_2.13		2	2
Drosophila_suzukii		2	2
Drosophila_yakuba_1.3		2	2
Drosophila_simulans_1.3		2	2
Drosophila_sechellia_1.3		2	2
Drosophila_melanogaster_76_5	(Fruit fly)	5	5
Drosophila_erecta_1.3		2	2
Drosophila_ananassae_1.3		2	2
Drosophila_virilis_1.2		1	1
Drosophila_mojavensis_1.3		3	3
Megaselia_scalaris_22		1	1
Culex_pipiens_quinquefasciatus_	(Southern house mosquito)	1	1
Anopheles_darlingi_22	(American malaria mosquito)	1	1
Anopheles_gambiae_49_3j	(African malaria mosquito)	1	1
Tribolium_castaneum_3.0	(Red flour beetle)	1	1
Pediculus_humanus_corporis__(Early_assembly)	(Human body louse)	1	1
Acyrthosiphon_pisum_	(Pea aphid)	1	1
Daphnia_pulex_	(Common water flea)	3	3
Strigamia_maritima_22		3	3
Sarcoptes_scabiei		1	1
Tetranychus_urticae_	(Two-spotted spider mite)	2	2
Ixodes_scapularis__(Preliminary)	(Black-legged tick)	1	1
Pristionchus_pacificus_		8	7
Meloidogyne_incognita_	(Southern root-knot nematode)	6	5
Meloidogyne_hapla_		1	1
Onchocerca_volvulus_22		1	1
Brugia_malayi_WS250	(Agent of lymphatic filariasis)	1	1
Caenorhabditis_japonica_		3	2
Caenorhabditis_brenneri_		9	6
Caenorhabditis_remanei_		8	6
Caenorhabditis_elegans_76_235	(Roundworm)	12	11
Caenorhabditis_briggsae_2		6	5
Trichinella_spiralis_22		1	1
Hymenolepis_microstoma_		4	4
Echinococcus_granulosus_		1	1
Taenia_solium_	(Pork tapeworm)	1	1
Schistosoma_mansoni_		2	2
Mnemiopsis_leidyi	(Sea walnut)	1	1
Acropora_digitifera_v1.0		1	1
Nematostella_vectensis_1.0	(Starlet sea anemone)	1	1
Hydra_vulgaris		1	1
Amphimedon_queenslandica		6	5
Trichoplax_adhaerens_		2	2
Proterospongia_sp._ATCC_50818_		1	1
Sphaeroforma_arctica_JP610_		1	1
Capsaspora_owczarzaki_ATCC_30864_		1	1
Stagonospora_nodorum_		1	1
Pichia_pastoris_GS115_		1	1
Vanderwaltozyma_polyspora_DSM_70294_		1	1
Candida_glabrata_CBS138		2	2
Kluyveromyces_lactis		1	1
Schizosaccharomyces_japonicus_yFS275_		1	1
Allomyces_macrogynus_ATCC_38327_		1	1
Pinus_taeda	(Loblolly pine)	1	1
Eucalyptus_grandis_v201	(Rose gum)	11	10
Gossypium_raimondii_v221		6	6
Citrus_clementina_v165		7	7
Citrus_sinensis_v154	(Sweet orange)	1	1
Thellungiella_halophila_v173		3	3
Brassica_rapa_Chiifu-401_1.2	(Field mustard)	4	3
Capsella_rubella_v183		1	1
Arabidopsis_lyrata_	(Lyrate rockcress)	1	1
Medicago_truncatula_	(Barrel medic)	11	10
Phaseolus_vulgaris_v186	(French bean)	2	2
Glycine_max_v109	(Soybean)	7	7
Fragaria_vesca_	(Wild strawberry)	7	7
Malus_domestica_v196	(Apple)	12	11
Prunus_persica_v139	(Peach)	6	4
Linum_usitatissimum_v200	(Flax)	2	2
Manihot_esculenta_v147	(Cassava)	3	3
Populus_trichocarpa_v156	(Black cottonwood)	9	9
Vitis_vinifera_	(Wine grape)	5	5
Solanum_lycopersicum_v.2.3	(Tomato)	2	2
Solanum_tuberosum_	(Potato)	3	3
Aquilegia_coerulea_v195		7	6
Triticum_urartu_22		2	2
Triticum_aestivum_22	(Bread wheat)	11	8
Aegilops_tauschii_22		3	3
Brachypodium_distachyon_	(Stiff brome)	5	5
Oryza_barthii_22	(African wild rice)	1	1
Oryza_meridionalis_22		1	1
Oryza_glumaepatula_22		2	2
Oryza_glaberrima	(African rice)	2	2
Oryza_nivara_22		2	2
Oryza_brachyantha_22	(Malo sina)	1	1
Oryza_sativa_ssp._japonica_5.0	(Japanese rice)	4	4
Oryza_sativa_v193	(Rice)	4	4
Phyllostachys_heterocyclavar._pubescens	(Kikko-chiku)	1	1
Setaria_italica_v164	(Foxtail millet)	5	5
Zea_mays_subsp._mays_	(Maize)	4	4
Zea_mays_v181	(Maize)	4	4
Sorghum_bicolor_	(Sorghum)	1	1
Musa_balbisiana	(Balbis banana)	1	1
Musa_acuminata_22	(Wild Malaysian banana)	1	1
Amborella_trichopoda_22		1	1
Physcomitrella_patens		1	1
Cyanophora_paradoxa_		1	1
Albugo_laibachii_22		2	2
Pythium_aphanidermatum_DAOM_BR444_22		1	1
Pythium_irregulare_DAOM_BR486_22		1	1

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Strains

Genome		Number	Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)	(Tropical clawed frog)	2	2
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)	(Fruit fly)	4	4
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)	(African malaria mosquito)	1	1
Ascaris_suum_Victoria/Ghent_	(Pig roundworm)	2	2
Caenorhabditis_elegans_WormBase_WS218__(WormBase)	(Roundworm)	9	8
Batrachochytrium_dendrobatidis_JEL423_		1	1
Batrachochytrium_dendrobatidis_JAM81_		1	1
Theobroma_cacao_Matina_1-6_v0.9	(Cacao)	3	3
Hordeum_vulgare_22	(Domesticated barley)	1	1

Longest transcript per gene

Genome		Number	Proteins
Homo_sapiens_69_37	(Human)	2	2
Pan_troglodytes_69_2.1.4	(Chimpanzee)	2	2
Gorilla_gorilla_69_3.1	(Western gorilla)	2	2
Pongo_abelii_69_2	(Sumatran orangutan)	2	2
Nomascus_leucogenys_69_1.0	(Northern white-cheeked gibbon)	2	2
Macaca_mulatta_69_1	(Rhesus monkey)	2	2
Callithrix_jacchus_69_3.2.1	(White-tufted-ear marmoset)	2	2
Otolemur_garnettii_69_3	(Small-eared galago)	2	2
Microcebus_murinus_69_1	(Gray mouse lemur)	2	2
Rattus_norvegicus_69_3.4	(Norway rat)	2	2
Mus_musculus_69_38	(House mouse)	2	2
Dipodomys_ordii_69_1	(Ord's kangaroo rat)	2	2
Cavia_porcellus_69_3	(Domestic guinea pig)	2	2
Oryctolagus_cuniculus_69_2	(Rabbit)	2	2
Ochotona_princeps_69	(American pika)	2	2
Tupaia_belangeri_69	(Northern tree shrew)	1	1
Sus_scrofa_69_10.2	(Pig)	2	2
Bos_taurus_69_3.1	(Cattle)	2	2
Vicugna_pacos_69_1	(Alpaca)	2	2
Tursiops_truncatus_69_1	(Bottlenose dolphin)	2	2
Mustela_putorius_furo_69_1.0	(Domestic ferret)	2	2
Ailuropoda_melanoleuca_69_1	(Giant panda)	2	2
Canis_familiaris_69_3.1	(Dog)	2	2
Felis_catus_69	(Domestic cat)	2	2
Equus_caballus_69_2	(Horse)	2	2
Myotis_lucifugus_69_2.0	(Little brown bat)	2	2
Pteropus_vampyrus_69_1	(Large flying fox)	2	2
Sorex_araneus_69_1	(European shrew)	2	2
Erinaceus_europaeus_69	(Western European hedgehog)	2	2
Procavia_capensis_69_1	(Cape rock hyrax)	2	2
Loxodonta_africana_69_3	(African savanna elephant)	2	2
Echinops_telfairi_69	(Small Madagascar hedgehog)	2	2
Dasypus_novemcinctus_69_2	(Nine-banded armadillo)	2	2
Choloepus_hoffmanni_69_1	(Hoffmann's two-fingered sloth)	2	2
Sarcophilus_harrisii_69_7.0	(Tasmanian devil)	2	2
Monodelphis_domestica_69_5	(Gray short-tailed opossum)	2	2
Ornithorhynchus_anatinus_69_5	(Platypus)	3	3
Petromyzon_marinus_69_7.0	(Sea lamprey)	1	1
Meleagris_gallopavo_69_2	(Turkey)	2	2
Gallus_gallus_69_2	(Chicken)	2	2
Taeniopygia_guttata_69_3.2.4	(Zebra finch)	2	2
Pelodiscus_sinensis_69_1.0	(Chinese soft-shelled turtle)	2	2
Anolis_carolinensis_69_2.0	(Green anole)	2	2
Xenopus_tropicalis_69_4.2	(Tropical clawed frog)	2	2
Latimeria_chalumnae_69_1	(Coelacanth)	2	2
Gadus_morhua_69_1	(Atlantic cod)	4	4
Tetraodon_nigroviridis_69_8	(Spotted green pufferfish)	4	4
Takifugu_rubripes_69_4	(Torafugu)	4	4
Gasterosteus_aculeatus_69_1	(Three-spined stickleback)	4	4
Oryzias_latipes_69_1	(Japanese medaka)	4	4
Xiphophorus_maculatus_69_4.4.2	(Southern platyfish)	4	4
Oreochromis_niloticus_69_1.0	(Nile tilapia)	4	4
Danio_rerio_69_9	(Zebrafish)	4	4
Ciona_savignyi_69_2.0	(Pacific transparent sea squirt)	1	1
Ciona_intestinalis_69	(Vase tunicate)	1	1
Drosophila_melanogaster_69_5	(Fruit fly)	2	2
Caenorhabditis_elegans_69_215	(Roundworm)	7	6

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Others

Genome		Number	Proteins
Homo_sapiens_75_37_(old_version_GRC)	(Human)	4	4
Homo_sapiens__(NCBI_version)	(Human)	3	3
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)	(House mouse)	2	2
Loa_loa_v3.3_(Request)	(Eye worm)	1	1
Wuchereria_bancrofti_v1.0_(Request)	(Agent of lymphatic filariasis)	1	1
Brugia_malayi_v1.0_(Duplicate)	(Agent of lymphatic filariasis)	1	1
Lotus_japonicus__(Early_assembly)		2	2
Malus_x_domestica_(Duplicate)	(Apple)	12	11
Ricinus_communis__(Early_assembly)	(Castor bean)	1	1
Nicotiana_benthamiana_0.4.4_(Early_draft)		3	3
Solanum_pimpinellifolium_A-1.0_(Early_draft)	(Currant tomato)	2	2
Solanum_lycopersicum_v2.3_(Early_assembly)	(Tomato)	2	2
TargetDB__(Targets)		4	4
PDB_chains_(SCOP_1.75)_(PDB)		2	2
Protein_Data_Bank_(all_PDB_sequenc)		18	18
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ)		30	30
STRING_v9.0.5_(STRING)		141	133
Uniprot_2018_03_genome		1666	1598
NCBI_2017_08_genome		2335	2247

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