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Domain combinations for Transferrin receptor-like dimerisation domain superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Transferrin receptor-like dimerisation domain domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   28 28
Pan_troglodytes_76_2.1.4   (Chimpanzee)   6 6
Gorilla_gorilla_76_3.1   (Western gorilla)   6 6
Pongo_abelii_76_2   (Sumatran orangutan)   6 6
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   4 4
Papio_anubis_76   (Olive baboon)   4 4
Macaca_mulatta_76_1   (Rhesus monkey)   10 10
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   11 11
Otolemur_garnettii_76_3   (Small-eared galago)   6 6
Microcebus_murinus_76_1   (Gray mouse lemur)   5 5
Rattus_norvegicus_76_5.0   (Norway rat)   5 5
Mus_musculus_76_38   (House mouse)   8 8
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   5 5
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   5 5
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   6 6
Cavia_porcellus_76_3   (Domestic guinea pig)   5 5
Oryctolagus_cuniculus_76_2   (Rabbit)   8 8
Ochotona_princeps_76   (American pika)   5 5
Tupaia_belangeri_76   (Northern tree shrew)   4 4
Sus_scrofa_76_10.2   (Pig)   6 6
Bos_taurus_76_3.1   (Cattle)   5 5
Ovis_aries_76_3.1   (Sheep)   6 6
Vicugna_pacos_76_1   (Alpaca)   5 5
Tursiops_truncatus_76_1   (Bottlenose dolphin)   5 5
Mustela_putorius_furo_76_1.0   (Domestic ferret)   5 5
Ailuropoda_melanoleuca_76_1   (Giant panda)   6 6
Canis_familiaris_76_3.1   (Dog)   6 6
Felis_catus_76_6.2   (Domestic cat)   7 7
Equus_caballus_76_2   (Horse)   6 6
Myotis_lucifugus_76_2.0   (Little brown bat)   5 5
Pteropus_vampyrus_76_1   (Large flying fox)   6 6
Sorex_araneus_76_1   (European shrew)   6 6
Erinaceus_europaeus_76   (Western European hedgehog)   5 5
Procavia_capensis_76_1   (Cape rock hyrax)   5 5
Loxodonta_africana_76_3   (African savanna elephant)   7 7
Echinops_telfairi_76   (Small Madagascar hedgehog)   4 4
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   5 5
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   4 4
Macropus_eugenii_76_1.0   (Tammar wallaby)   5 5
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   6 6
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   7 7
Ornithorhynchus_anatinus_76_5   (Platypus)   4 4
Saccoglossus_kowalevskii_v3.0 6 6
Petromyzon_marinus_76_7.0   (Sea lamprey)   1 1
Meleagris_gallopavo_76_2   (Turkey)   4 4
Gallus_gallus_76_4   (Chicken)   4 4
Anas_platyrhynchos_76_1.0   (Mallard)   3 3
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   4 4
Ficedula_albicollis_76_1.0   (Collared flycatcher)   5 5
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   6 6
Anolis_carolinensis_76_2.0   (Green anole)   6 6
Xenopus_laevis_   (African clawed frog)   5 5
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   6 6
Latimeria_chalumnae_76_1   (Coelacanth)   4 4
Lepisosteus_oculatus_76   (Spotted gar)   7 7
Gadus_morhua_76_1   (Atlantic cod)   4 4
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   5 5
Takifugu_rubripes_76_4   (Torafugu)   14 14
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   8 8
Oryzias_latipes_76_1   (Japanese medaka)   4 4
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   6 6
Poecilia_formosa_76   (Amazon molly)   5 5
Oreochromis_niloticus_76_1.0   (Nile tilapia)   6 6
Astyanax_mexicanus_76   (Mexican tetra)   7 7
Danio_rerio_76_9   (Zebrafish)   9 9
Oikopleura_dioica 1 1
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   15 15
Ciona_intestinalis_76   (Vase tunicate)   5 5
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   13 11
Adineta_vaga 9 9
Octopus_bimaculoides_280 2 2
Crassostrea_gigas_22   (Pacific oyster)   6 6
Lottia_gigantea_   (Owl limpet)   2 2
Helobdella_robusta_ 1 1
Capitella_sp._I_ 3 3
Solenopsis_invicta_v.2.2.3   (Red fire ant)   1 1
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   1 1
Atta_cephalotes_v1.1 1 1
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   1 1
Daphnia_pulex_   (Common water flea)   4 4
Strigamia_maritima_22 3 3
Sarcoptes_scabiei 1 1
Tetranychus_urticae_   (Two-spotted spider mite)   1 1
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   7 7
Pristionchus_pacificus_ 2 2
Meloidogyne_hapla_ 2 2
Onchocerca_volvulus_22 2 2
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   1 1
Caenorhabditis_japonica_ 3 3
Caenorhabditis_brenneri_ 4 4
Caenorhabditis_remanei_ 2 2
Caenorhabditis_elegans_76_235   (Roundworm)   4 4
Caenorhabditis_briggsae_2 3 3
Echinococcus_multilocularis_ 1 1
Echinococcus_granulosus_ 1 1
Taenia_solium_   (Pork tapeworm)   1 1
Schistosoma_mansoni_ 1 1
Mnemiopsis_leidyi   (Sea walnut)   3 3
Acropora_digitifera_v1.0 7 7
Nematostella_vectensis_1.0   (Starlet sea anemone)   17 17
Hydra_vulgaris 3 3
Amphimedon_queenslandica 2 2
Trichoplax_adhaerens_ 2 2
Capsaspora_owczarzaki_ATCC_30864_ 2 2
Phycomyces_blakesleeanus_ 1 1
Rhizopus_oryzae_RA_99-880_ 4 4
Mucor_circinelloides_ 6 6
Rhizomucor_miehei_CAU432_ 3 3
Malassezia_globosa_CBS_7966_ 2 2
Sporisorium_reilianum_22 1 1
Ustilago_maydis_ 1 1
Mixia_osmundae_IAM_14324_v1.0 1 1
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1 1
Melampsora_laricis-populina_ 1 1
Rhodotorula_graminis_WP1_v1.0 1 1
Sporobolomyces_roseus_IAM_13481_ 1 1
Microbotryum_violaceum_22 1 1
Sphaerobolus_stellatus_v1.0 2 1
Piloderma_croceum_F_1598_v1.0 4 3
Serpula_lacrymans_var._lacrymans_S7.9_ 2 2
Coniophora_puteana 2 2
Hydnomerulius_pinastri_v2.0 2 2
Paxillus_rubicundulus_Ve08.2h10_v1.0 2 2
Pisolithus_microcarpus_441_v1.0 3 3
Pisolithus_tinctorius_Marx_270_v1.0 2 2
Scleroderma_citrinum_Foug_A_v1.0 1 1
Coprinopsis_cinerea_okayama7_130_v3 1 1
Pleurotus_ostreatus_   (Oyster mushroom)   2 2
Amanita_thiersii_Skay4041_v1.0 1 1
Amanita_muscaria_Koide_v1.0   (Fly agaric)   1 1
Galerina_marginata_v1.0 4 2
Hebeloma_cylindrosporum_h7_v2.0 1 1
Laccaria_bicolor_S238N-H82_ 1 1
Agaricus_bisporus_var._bisporus_ 3 2
Schizophyllum_commune_ 1 1
Stereum_hirsutum_FP-91666_SS1__v1.0 4 3
Heterobasidion_annosum_ 1 1
Gloeophyllum_trabeumv1.0 3 2
Punctularia_strigosozonata_v1.0 2 2
Sebacina_vermifera_MAFF_305830_v1.0 1 1
Fomitiporia_mediterranea_v1.0 3 2
Tulasnella_calospora_AL13/4D_v1.0 2 2
Postia_placenta_ 4 3
Wolfiporia_cocos_MD-104_SS10__v1.0 3 2
Fomitopsis_pinicolav1.0 3 2
Fomitopsis_pinicola_FP-58527_SS1_v3.0 3 2
Phanerochaete_chrysosporium_RP-78_2.1 2 2
Dichomitus_squalens 5 4
Trametes_versicolor_v1.0 4 3
Tremella_mesenterica_   (Witches' butter)   1 1
Daldinia_eschscholzii_EC12_v1.0 3 3
Apiospora_montagnei_NRRL_25634_v1.0 3 3
Magnaporthe_poae_ATCC_64411_22 3 3
Magnaporthe_grisea_70-15_ 4 4
Podospora_anserina_ 2 2
Sporotrichum_thermophile_ATCC_42464_ 2 2
Thielavia_terrestris_NRRL_8126_ 2 2
Chaetomium_globosum_CBS_148.51_ 2 2
Neurospora_tetrasperma_ 2 2
Neurospora_discreta_FGSC_8579_ 2 2
Neurospora_crassa_OR74A_ 2 2
Cryphonectria_parasitica_   (Chestnut blight fungus)   2 2
Verticillium_albo-atrum_VaMs.102_ 2 2
Verticillium_dahliae_VdLs.17_ 3 3
Acremonium_alcalophilumv_1.0 3 3
Glomerella_graminicola_22 4 4
Fusarium_graminearum_ 4 4
Nectria_haematococca_mpVI_ 3 3
Fusarium_oxysporum_f._sp._lycopersici_4286_ 4 4
Fusarium_verticillioides_7600_ 4 4
Trichoderma_asperellum_CBS_433.97_v1.0 3 3
Trichoderma_atroviride_ 3 3
Trichoderma_citrinoviride_v1.0 2 2
Trichoderma_reesei_1.2 2 2
Trichoderma_virens_Gv29-8_ 2 2
Trichoderma_longibrachiatum_ATCC_18648_v1.0 2 2
Trichoderma_harzianum_CBS_226.95_v1.0 2 2
Amorphotheca_resinae_v1.0   (Creosote fungus)   2 2
Botrytis_cinerea_B05.10_ 2 2
Sclerotinia_sclerotiorum_ 2 2
Blumeria_graminis_22 2 2
Didymella_exigua_CBS_183.55_v1.0 3 3
Leptosphaeria_maculans_22 4 4
Setosphaeria_turcica_v1.0 4 4
Cochliobolus_miyabeanus_ATCC_44560_v1.0 5 5
Cochliobolus_victoriae_FI3_v1.0 5 5
Cochliobolus_carbonum_26-R-13_v1.0 5 5
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   5 5
Alternaria_brassicicola_ 6 6
Cochliobolus_lunatus_m118_v2.0 4 4
Pyrenophora_teres_f._teres_22 5 5
Pyrenophora_tritici-repentis_ 5 5
Stagonospora_nodorum_ 3 3
Mycosphaerella_graminicola_IPO323_ 3 3
Zasmidium_cellare_ATCC_36951_v1.0 3 3
Dothistroma_septosporum 3 3
Septoria_musiva_v1.0 2 2
Mycosphaerella_fijiensis_CIRAD86_ 3 3
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 2 2
Paracoccidioides_brasiliensis_Pb18_ 2 2
Coccidioides_posadasii_RMSCC_3488_ 3 3
Coccidioides_immitis_RS_ 3 3
Ajellomyces_dermatitidis_SLH14081_ 3 3
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 3 3
Microsporum_canis_CBS_113480_ 3 3
Trichophyton_equinum_CBS_127.97_ 3 3
Trichophyton_verrucosum_HKI_0517_ 3 3
Arthroderma_benhamiae_CBS_112371_ 3 3
Trichophyton_tonsurans_CBS_112818_ 3 3
Trichophyton_rubrum_CBS_118892_ 3 3
Uncinocarpus_reesii_1704_ 3 3
Aspergillus_zonatus_v1.0 2 2
Penicillium_chrysogenum_Wisconsin_54-1255_ 2 2
Penicillium_chrysogenum_v1.0 2 2
Aspergillus_acidus_v1.0 2 2
Aspergillus_fumigatus_Af293 2 2
Aspergillus_brasiliensis_v1.0 2 2
Aspergillus_nidulans_FGSC_A4_ 2 2
Aspergillus_sydowii_v1.0 2 2
Aspergillus_versicolor_v1.0 2 2
Aspergillus_glaucus 4 4
Aspergillus_carbonarius_ITEM_5010_ 2 2
Neosartorya_fischeri_NRRL_181_ 2 2
Aspergillus_terreus_NIH2624_ 2 2
Aspergillus_tubingensis_v1.0 2 2
Aspergillus_wentii_v1.0 4 4
Aspergillus_oryzae_RIB40_ 5 5
Aspergillus_niger_22 2 2
Aspergillus_niger_ATCC_1015_ 2 2
Aspergillus_flavus_NRRL3357_ 5 5
Aspergillus_clavatus_NRRL_1_ 2 2
Penicillium_marneffei_ATCC_18224_ 2 2
Tuber_melanosporum_Mel28_22 2 2
Tuber_melanosporum_Vittad_   (Perigord truffle)   2 2
Hansenula_polymorpha_v2.0 3 3
Dekkera_bruxellensis_CBS_2499_v2.0 2 2
Pichia_membranifaciensv1.0 3 3
Candida_tanzawaensis_NRRL_Y-17324__v1.0 2 2
Candida_dubliniensis_CD36_ 2 2
Candida_tropicalis_MYA-3404_ 1 1
Candida_parapsilosis_ 2 2
Candida_albicans_SC5314 2 2
Lodderomyces_elongisporus_NRRL_YB-4239_ 1 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 3 3
Pichia_stipitis_CBS_6054_ 2 2
Candida_guilliermondii_ATCC_6260_ 2 2
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 2 2
Debaromyces_hansenii 3 3
Wickerhamomyces_anomalus 3 3
Pichia_pastoris_GS115_ 3 3
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 3 3
Yarrowia_lipolytica_CLIB122 2 2
Candida_lusitaniae_ATCC_42720_ 3 3
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 2 2
Vanderwaltozyma_polyspora_DSM_70294_ 4 4
Candida_glabrata_CBS138 3 3
Kluyveromyces_thermotolerans_CBS_6340 3 3
Lachancea_kluyveri_ 3 3
Kluyveromyces_waltii 3 3
Ashbya_gossypii_ATCC_10895_ 2 2
Zygosaccharomyces_rouxii_ 2 2
Saccharomyces_mikatae_MIT 3 3
Saccharomyces_paradoxus_MIT 3 3
Saccharomyces_cerevisiae_76   (Baker's yeast)   3 3
Saccharomyces_bayanus_MIT 3 3
Kluyveromyces_lactis 3 3
Schizosaccharomyces_cryophilus_OY26_22 1 1
Schizosaccharomyces_octosporus_yFS286_ 1 1
Schizosaccharomyces_japonicus_yFS275_ 1 1
Schizosaccharomyces_pombe   (Fission yeast)   1 1
Selaginella_moellendorffii_ 10 10
Pinus_taeda   (Loblolly pine)   6 3
Picea_abies   (Norway spruce)   5 5
Eucalyptus_grandis_v201   (Rose gum)   4 4
Theobroma_cacao_B97-61/B2_v1   (Cacao)   2 2
Gossypium_raimondii_v221 5 5
Citrus_clementina_v165 2 2
Citrus_sinensis_v154   (Sweet orange)   2 2
Thellungiella_halophila_v173 2 2
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   3 3
Capsella_rubella_v183 2 2
Arabidopsis_lyrata_   (Lyrate rockcress)   2 2
Arabidopsis_thaliana_10   (Thale cress)   2 2
Carica_papaya_   (Papaya)   1 1
Medicago_truncatula_   (Barrel medic)   5 5
Phaseolus_vulgaris_v186   (French bean)   2 2
Glycine_max_v109   (Soybean)   4 4
Cucumis_sativus_v122   (Cucumber)   1 1
Fragaria_vesca_   (Wild strawberry)   3 3
Malus_domestica_v196   (Apple)   9 9
Prunus_persica_v139   (Peach)   2 2
Linum_usitatissimum_v200   (Flax)   4 4
Manihot_esculenta_v147   (Cassava)   2 2
Populus_trichocarpa_v156   (Black cottonwood)   3 3
Vitis_vinifera_   (Wine grape)   2 2
Mimulus_guttatus_v140   (Spotted monkey flower)   2 2
Solanum_lycopersicum_v.2.3   (Tomato)   2 2
Solanum_tuberosum_   (Potato)   1 1
Actinidia_chinensis_Hongyang_ 4 4
Aquilegia_coerulea_v195 4 4
Triticum_urartu_22 1 1
Triticum_aestivum_22   (Bread wheat)   12 12
Aegilops_tauschii_22 4 4
Brachypodium_distachyon_   (Stiff brome)   5 5
Oryza_barthii_22   (African wild rice)   9 8
Oryza_meridionalis_22 5 5
Oryza_glumaepatula_22 4 4
Oryza_glaberrima   (African rice)   4 4
Oryza_punctata_22 6 6
Oryza_nivara_22 10 10
Oryza_brachyantha_22   (Malo sina)   5 5
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   6 6
Oryza_sativa_v193   (Rice)   6 6
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   4 4
Panicum_virgatum_v202   (Switchgrass)   8 8
Setaria_italica_v164   (Foxtail millet)   5 5
Zea_mays_subsp._mays_   (Maize)   7 7
Zea_mays_v181   (Maize)   8 8
Sorghum_bicolor_   (Sorghum)   3 3
Musa_balbisiana   (Balbis banana)   3 3
Musa_acuminata_22   (Wild Malaysian banana)   3 3
Amborella_trichopoda_22 3 3
Physcomitrella_patens 2 2
Cyanidioschyzon_merolae_strain_10D_22 1 1
Cyanidioschyzon_merolae 1 1
Porphyridium_purpureum_02_2012 1 1
Thecamonas_trahens_ATCC_50062_ 1 1
Bigelowiella_natans_CCMP2755_22 1 1
Ectocarpus_siliculosus 1 1
Albugo_laibachii_22 1 1
Pythium_iwayamai_DAOM_BR242034_22 5 5
Pythium_arrhenomanes_ATCC_12531_22 6 5
Pythium_ultimum_v1.7-2 8 7
Pythium_aphanidermatum_DAOM_BR444_22 6 6
Pythium_irregulare_DAOM_BR486_22 6 5
Pythium_vexans_DAOM_BR484_22 9 8
Phytophthora_ramorum_1.1   (Sudden oak death agent)   14 11
Phytophthora_sojae_1.1 7 7
Phytophthora_infestans_T30-4_ 4 4
Phytophthora_capsici_ 5 5
Fragilariopsis_cylindrus 2 2
Guillardia_theta_CCMP2712_v1.0_ 1 1
Emiliania_huxleyi_CCMP1516_ 1 1
Gloeobacter_violaceus_PCC_7421 1 1
Mycoplasma_arthritidis_158L3-1 1 1
Saccharomonospora_viridis_DSM_43017 1 1
Gemmatimonas_aurantiaca_T-27 1 1
Chitinophaga_pinensis_DSM_2588 1 1
Rhodothermus_marinus_DSM_4252 1 1
Belliella_baltica_DSM_15883 1 1
Cyclobacterium_marinum_DSM_745 1 1
Dyadobacter_fermentans_DSM_18053 1 1
Spirosoma_linguale_DSM_74 1 1
Runella_slithyformis_DSM_19594 1 1
Sphingobacterium_sp._21 1 1
Robiginitalea_biformata_HTCC2501 2 2
Muricauda_ruestringensis_DSM_13258 1 1
Candidatus_Chloracidobacterium_thermophilum_B 1 1
Candidatus_Solibacter_usitatus_Ellin6076 1 1
Granulicella_tundricola_MP5ACTX9 1 1
Granulicella_mallensis_MP5ACTX8 1 1
Candidatus_Koribacter_versatilis_Ellin345 3 3
Terriglobus_saanensis_SP1PR4 1 1
Terriglobus_roseus_DSM_18391 1 1
Acidobacterium_capsulatum_ATCC_51196 1 1
Rhodanobacter_denitrificans 1 1
Xanthomonas_axonopodis_pv._citri_str._306 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   6 6
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   2 2
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   4 4
Cryptococcus_neoformans_var._grubii_H99_ 1 1
Cryptococcus_neoformans_B-3501A_ 1 1
Cryptococcus_neoformans_JEC21_ 1 1
Paracoccidioides_brasiliensis_Pb01_ 2 2
Paracoccidioides_brasiliensis_Pb03_ 3 3
Coccidioides_posadasii_str._Silveira_ 3 3
Coccidioides_immitis_RMSCC_3703_ 3 3
Coccidioides_immitis_RMSCC_2394_ 3 3
Coccidioides_immitis_H538.4_ 3 3
Ajellomyces_dermatitidis_ER-3_ 3 3
Histoplasma_capsulatum_H143 3 3
Histoplasma_capsulatum_H88 3 3
Histoplasma_capsulatum_G186AR 3 3
Aspergillus_fumigatus_A1163_ 2 2
Candida_albicans_WO-1_ 2 2
Saccharomyces_cerevisiae_UC5 3 3
Saccharomyces_cerevisiae_PW5 3 3
Saccharomyces_cerevisiae_FL100 1 1
Saccharomyces_cerevisiae_CBS7960 2 2
Saccharomyces_cerevisiae_YJM269 1 1
Saccharomyces_cerevisiae_T7 3 3
Saccharomyces_cerevisiae_FostersB 2 2
Saccharomyces_cerevisiae_FostersO 2 2
Saccharomyces_cerevisiae_VL3 3 3
Saccharomyces_cerevisiae_Vin13 1 1
Saccharomyces_cerevisiae_LalvinQA23 2 2
Saccharomyces_cerevisiae_AWRI796 2 2
Saccharomyces_cerevisiae_Sigma1278b 3 3
Saccharomyces_cerevisiae_W303 3 3
Saccharomyces_cerevisiae_JAY291 3 3
Saccharomyces_cerevisiae_AWRI1631 1 1
Saccharomyces_cerevisiae_YPS163 1 1
Saccharomyces_cerevisiae_T73 2 2
Saccharomyces_cerevisiae_CLIB215 2 2
Saccharomyces_cerevisiae_YJM789_ 3 3
Saccharomyces_cerevisiae_YJM789 3 3
Saccharomyces_cerevisiae_RM11-1a 3 3
Saccharomyces_cerevisiae_RM11-1a_ 2 2
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   3 3
Schizosaccharomyces_pombe_972h-_ 1 1
Batrachochytrium_dendrobatidis_JEL423_ 1 1
Batrachochytrium_dendrobatidis_JAM81_ 1 1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   2 2
Hordeum_vulgare_22   (Domesticated barley)   4 4
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   4 4
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 1 1
Rhodothermus_marinus_SG0.5JP17-172 1 1
Emticicia_oligotrophica_DSM_17448 1 1
Psychroflexus_torquis_ATCC_700755 1 1
Singulisphaera_acidiphila_DSM_18658 1 1
Xanthomonas_citri_subsp._citri_Aw12879 1 1
Xanthomonas_axonopodis_Xac29-1 1 1

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   6 6
Pan_troglodytes_69_2.1.4   (Chimpanzee)   6 6
Gorilla_gorilla_69_3.1   (Western gorilla)   4 4
Pongo_abelii_69_2   (Sumatran orangutan)   6 6
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   4 4
Macaca_mulatta_69_1   (Rhesus monkey)   4 4
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   6 6
Otolemur_garnettii_69_3   (Small-eared galago)   6 6
Microcebus_murinus_69_1   (Gray mouse lemur)   5 5
Rattus_norvegicus_69_3.4   (Norway rat)   6 6
Mus_musculus_69_38   (House mouse)   5 5
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   5 5
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   5 5
Cavia_porcellus_69_3   (Domestic guinea pig)   5 5
Oryctolagus_cuniculus_69_2   (Rabbit)   6 6
Ochotona_princeps_69   (American pika)   5 5
Tupaia_belangeri_69   (Northern tree shrew)   4 4
Sus_scrofa_69_10.2   (Pig)   5 5
Bos_taurus_69_3.1   (Cattle)   5 5
Vicugna_pacos_69_1   (Alpaca)   5 5
Tursiops_truncatus_69_1   (Bottlenose dolphin)   5 5
Mustela_putorius_furo_69_1.0   (Domestic ferret)   5 5
Ailuropoda_melanoleuca_69_1   (Giant panda)   6 6
Canis_familiaris_69_3.1   (Dog)   6 6
Felis_catus_69   (Domestic cat)   4 4
Equus_caballus_69_2   (Horse)   6 6
Myotis_lucifugus_69_2.0   (Little brown bat)   5 5
Pteropus_vampyrus_69_1   (Large flying fox)   6 6
Sorex_araneus_69_1   (European shrew)   6 6
Erinaceus_europaeus_69   (Western European hedgehog)   5 5
Procavia_capensis_69_1   (Cape rock hyrax)   5 5
Loxodonta_africana_69_3   (African savanna elephant)   5 5
Echinops_telfairi_69   (Small Madagascar hedgehog)   4 4
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   3 3
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   4 4
Macropus_eugenii_69_1.0   (Tammar wallaby)   5 5
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   5 5
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   7 7
Ornithorhynchus_anatinus_69_5   (Platypus)   4 4
Petromyzon_marinus_69_7.0   (Sea lamprey)   1 1
Meleagris_gallopavo_69_2   (Turkey)   4 4
Gallus_gallus_69_2   (Chicken)   4 4
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   4 4
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   6 6
Anolis_carolinensis_69_2.0   (Green anole)   5 5
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   6 6
Latimeria_chalumnae_69_1   (Coelacanth)   4 4
Gadus_morhua_69_1   (Atlantic cod)   4 4
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   5 5
Takifugu_rubripes_69_4   (Torafugu)   5 5
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   5 5
Oryzias_latipes_69_1   (Japanese medaka)   4 4
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   6 6
Oreochromis_niloticus_69_1.0   (Nile tilapia)   6 6
Danio_rerio_69_9   (Zebrafish)   7 7
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   8 8
Ciona_intestinalis_69   (Vase tunicate)   5 5
Caenorhabditis_elegans_69_215   (Roundworm)   3 3
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   3 3
Arabidopsis_thaliana_10   (Thale cress)   2 2

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   28 28
Homo_sapiens__(NCBI_version)   (Human)   13 13
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   5 5
Loa_loa_v3.3_(Request)   (Eye worm)   2 2
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   2 2
Moniliophthora_perniciosa_FA553__(Genome_survey) 3 3
Lotus_japonicus__(Early_assembly) 5 5
Malus_x_domestica_(Duplicate)   (Apple)   9 9
Ricinus_communis__(Early_assembly)   (Castor bean)   2 2
Nicotiana_benthamiana_0.4.4_(Early_draft) 4 4
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   2 2
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   2 2
Phoenix_dactylifera__(Early_draft)   (Date palm)   1 1
STRING_v9.0.5_(STRING) 359 354
NCBI_2017_08_genome 3813 3797
Uniprot_2018_03_genome 4204 4148
PDB_chains_(SCOP_1.75)_(PDB) 5 5
Protein_Data_Bank_(all_PDB_sequenc) 104 104
TargetDB__(Targets) 3 3
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 209 209

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