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Domain combinations for PAH2 domain superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a PAH2 domain domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   29 12
Pan_troglodytes_76_2.1.4   (Chimpanzee)   8 3
Gorilla_gorilla_76_3.1   (Western gorilla)   13 5
Pongo_abelii_76_2   (Sumatran orangutan)   8 3
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   6 2
Papio_anubis_76   (Olive baboon)   8 3
Macaca_mulatta_76_1   (Rhesus monkey)   18 7
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   25 11
Otolemur_garnettii_76_3   (Small-eared galago)   8 3
Microcebus_murinus_76_1   (Gray mouse lemur)   5 3
Rattus_norvegicus_76_5.0   (Norway rat)   7 3
Mus_musculus_76_38   (House mouse)   27 11
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   8 3
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   11 4
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   5 2
Cavia_porcellus_76_3   (Domestic guinea pig)   8 3
Oryctolagus_cuniculus_76_2   (Rabbit)   8 3
Ochotona_princeps_76   (American pika)   8 3
Tupaia_belangeri_76   (Northern tree shrew)   6 3
Sus_scrofa_76_10.2   (Pig)   10 4
Bos_taurus_76_3.1   (Cattle)   8 3
Ovis_aries_76_3.1   (Sheep)   13 5
Vicugna_pacos_76_1   (Alpaca)   6 3
Tursiops_truncatus_76_1   (Bottlenose dolphin)   8 3
Mustela_putorius_furo_76_1.0   (Domestic ferret)   8 3
Ailuropoda_melanoleuca_76_1   (Giant panda)   8 3
Canis_familiaris_76_3.1   (Dog)   16 6
Felis_catus_76_6.2   (Domestic cat)   8 3
Equus_caballus_76_2   (Horse)   11 4
Myotis_lucifugus_76_2.0   (Little brown bat)   8 3
Pteropus_vampyrus_76_1   (Large flying fox)   7 3
Sorex_araneus_76_1   (European shrew)   5 3
Erinaceus_europaeus_76   (Western European hedgehog)   4 2
Procavia_capensis_76_1   (Cape rock hyrax)   8 3
Loxodonta_africana_76_3   (African savanna elephant)   16 6
Echinops_telfairi_76   (Small Madagascar hedgehog)   6 2
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   2 1
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   4 2
Macropus_eugenii_76_1.0   (Tammar wallaby)   8 3
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   14 5
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   8 3
Ornithorhynchus_anatinus_76_5   (Platypus)   6 2
Saccoglossus_kowalevskii_v3.0 13 6
Petromyzon_marinus_76_7.0   (Sea lamprey)   3 1
Meleagris_gallopavo_76_2   (Turkey)   8 3
Gallus_gallus_76_4   (Chicken)   8 3
Anas_platyrhynchos_76_1.0   (Mallard)   8 3
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   8 3
Ficedula_albicollis_76_1.0   (Collared flycatcher)   8 3
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   8 3
Anolis_carolinensis_76_2.0   (Green anole)   5 2
Xenopus_laevis_   (African clawed frog)   29 10
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   10 4
Latimeria_chalumnae_76_1   (Coelacanth)   8 3
Lepisosteus_oculatus_76   (Spotted gar)   12 5
Gadus_morhua_76_1   (Atlantic cod)   11 4
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   20 7
Takifugu_rubripes_76_4   (Torafugu)   52 19
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   11 4
Oryzias_latipes_76_1   (Japanese medaka)   10 4
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   11 5
Poecilia_formosa_76   (Amazon molly)   12 5
Oreochromis_niloticus_76_1.0   (Nile tilapia)   11 4
Astyanax_mexicanus_76   (Mexican tetra)   14 6
Danio_rerio_76_9   (Zebrafish)   15 6
Oikopleura_dioica 3 1
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   25 9
Ciona_intestinalis_76   (Vase tunicate)   11 4
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   6 3
Adineta_vaga 12 4
Octopus_bimaculoides_280 5 2
Crassostrea_gigas_22   (Pacific oyster)   4 2
Lottia_gigantea_   (Owl limpet)   5 3
Helobdella_robusta_ 4 2
Capitella_sp._I_ 11 8
Danaus_plexippus_OGS1.0   (Monarch butterfly)   4 2
Heliconius_melpomene_   (Postman butterfly)   3 3
Bombyx_mori_   (Domestic silkworm)   3 1
Nasonia_vitripennis_   (Jewel wasp)   3 1
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   12 4
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   5 2
Linepithema_humile_v1.1   (Argentine ant)   3 1
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   3 1
Solenopsis_invicta_v.2.2.3   (Red fire ant)   3 1
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   3 1
Atta_cephalotes_v1.1 3 1
Camponotus_floridanus_v3.3   (Florida carpenter ant)   3 1
Lucilia_cuprina   (Australian sheep blowfly)   3 1
Drosophila_grimshawi_1.3 4 2
Drosophila_willistoni_1.3 4 2
Drosophila_pseudoobscura_2.13 4 2
Drosophila_persimilis_1.3 5 2
Drosophila_suzukii 4 2
Drosophila_yakuba_1.3 4 2
Drosophila_simulans_1.3 5 2
Drosophila_sechellia_1.3 5 2
Drosophila_melanogaster_76_5   (Fruit fly)   23 9
Drosophila_erecta_1.3 4 2
Drosophila_ananassae_1.3 4 2
Drosophila_virilis_1.2 5 2
Drosophila_mojavensis_1.3 5 2
Megaselia_scalaris_22 3 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   11 4
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   5 2
Anopheles_darlingi_22   (American malaria mosquito)   4 2
Anopheles_gambiae_49_3j   (African malaria mosquito)   5 2
Tribolium_castaneum_3.0   (Red flour beetle)   4 2
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   4 2
Acyrthosiphon_pisum_   (Pea aphid)   3 1
Rhodnius_prolixus_22 3 1
Daphnia_pulex_   (Common water flea)   6 3
Strigamia_maritima_22 5 2
Sarcoptes_scabiei 3 1
Tetranychus_urticae_   (Two-spotted spider mite)   3 1
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   5 2
Pristionchus_pacificus_ 1 1
Meloidogyne_incognita_   (Southern root-knot nematode)   3 1
Meloidogyne_hapla_ 3 1
Onchocerca_volvulus_22 3 1
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   3 1
Caenorhabditis_japonica_ 2 2
Caenorhabditis_brenneri_ 2 2
Caenorhabditis_remanei_ 1 1
Caenorhabditis_elegans_76_235   (Roundworm)   2 2
Caenorhabditis_briggsae_2 1 1
Trichinella_spiralis_22 8 5
Hymenolepis_microstoma_ 2 1
Echinococcus_multilocularis_ 2 1
Echinococcus_granulosus_ 2 1
Taenia_solium_   (Pork tapeworm)   2 1
Schistosoma_mansoni_ 2 1
Mnemiopsis_leidyi   (Sea walnut)   6 3
Thelohanellus_kitauei 1 1
Acropora_digitifera_v1.0 4 2
Nematostella_vectensis_1.0   (Starlet sea anemone)   4 2
Hydra_vulgaris 4 2
Amphimedon_queenslandica 7 3
Trichoplax_adhaerens_ 5 2
Proterospongia_sp._ATCC_50818_ 3 1
Monosiga_brevicollis_ 3 1
Sphaeroforma_arctica_JP610_ 7 4
Capsaspora_owczarzaki_ATCC_30864_ 4 2
Conidiobolus_coronatus_NRRL28638_v1.0 3 2
Mortierella_verticillata_NRRL_6337_ 9 3
Phycomyces_blakesleeanus_ 13 5
Rhizopus_oryzae_RA_99-880_ 17 6
Mucor_circinelloides_ 13 5
Rhizomucor_miehei_CAU432_ 9 3
Malassezia_globosa_CBS_7966_ 4 2
Sporisorium_reilianum_22 3 1
Ustilago_maydis_ 3 1
Mixia_osmundae_IAM_14324_v1.0 6 2
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 6 2
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 5 2
Melampsora_laricis-populina_ 6 2
Rhodotorula_graminis_WP1_v1.0 6 2
Sporobolomyces_roseus_IAM_13481_ 6 2
Microbotryum_violaceum_22 6 2
Wallemia_sebi_v1.0 3 1
Sphaerobolus_stellatus_v1.0 13 8
Piloderma_croceum_F_1598_v1.0 4 2
Serpula_lacrymans_var._lacrymans_S7.9_ 6 2
Coniophora_puteana 6 2
Hydnomerulius_pinastri_v2.0 6 2
Paxillus_rubicundulus_Ve08.2h10_v1.0 6 2
Pisolithus_microcarpus_441_v1.0 6 2
Pisolithus_tinctorius_Marx_270_v1.0 6 2
Scleroderma_citrinum_Foug_A_v1.0 7 3
Coprinopsis_cinerea_okayama7_130_v3 10 5
Pleurotus_ostreatus_   (Oyster mushroom)   8 3
Amanita_thiersii_Skay4041_v1.0 8 4
Amanita_muscaria_Koide_v1.0   (Fly agaric)   7 3
Galerina_marginata_v1.0 6 2
Hebeloma_cylindrosporum_h7_v2.0 9 5
Laccaria_bicolor_S238N-H82_ 8 4
Agaricus_bisporus_var._bisporus_ 7 3
Schizophyllum_commune_ 7 4
Stereum_hirsutum_FP-91666_SS1__v1.0 5 2
Heterobasidion_annosum_ 6 2
Gloeophyllum_trabeumv1.0 7 3
Punctularia_strigosozonata_v1.0 8 5
Sebacina_vermifera_MAFF_305830_v1.0 8 6
Fomitiporia_mediterranea_v1.0 7 3
Tulasnella_calospora_AL13/4D_v1.0 5 3
Postia_placenta_ 17 7
Wolfiporia_cocos_MD-104_SS10__v1.0 11 6
Fomitopsis_pinicolav1.0 6 2
Fomitopsis_pinicola_FP-58527_SS1_v3.0 6 2
Phanerochaete_chrysosporium_RP-78_2.1 5 2
Dichomitus_squalens 6 2
Trametes_versicolor_v1.0 8 4
Tremella_mesenterica_   (Witches' butter)   2 1
Daldinia_eschscholzii_EC12_v1.0 3 1
Apiospora_montagnei_NRRL_25634_v1.0 3 1
Magnaporthe_poae_ATCC_64411_22 3 1
Magnaporthe_grisea_70-15_ 2 1
Podospora_anserina_ 3 1
Sporotrichum_thermophile_ATCC_42464_ 3 1
Thielavia_terrestris_NRRL_8126_ 3 1
Chaetomium_globosum_CBS_148.51_ 3 1
Neurospora_tetrasperma_ 3 1
Neurospora_discreta_FGSC_8579_ 3 1
Neurospora_crassa_OR74A_ 3 1
Cryphonectria_parasitica_   (Chestnut blight fungus)   3 1
Verticillium_albo-atrum_VaMs.102_ 3 1
Verticillium_dahliae_VdLs.17_ 3 1
Acremonium_alcalophilumv_1.0 3 1
Glomerella_graminicola_22 4 2
Fusarium_graminearum_ 4 2
Nectria_haematococca_mpVI_ 4 2
Fusarium_oxysporum_f._sp._lycopersici_4286_ 3 1
Fusarium_verticillioides_7600_ 3 1
Trichoderma_asperellum_CBS_433.97_v1.0 4 2
Trichoderma_atroviride_ 3 1
Trichoderma_citrinoviride_v1.0 3 1
Trichoderma_reesei_1.2 3 1
Trichoderma_virens_Gv29-8_ 3 1
Trichoderma_longibrachiatum_ATCC_18648_v1.0 3 1
Trichoderma_harzianum_CBS_226.95_v1.0 5 2
Amorphotheca_resinae_v1.0   (Creosote fungus)   3 1
Botrytis_cinerea_B05.10_ 2 2
Sclerotinia_sclerotiorum_ 4 2
Blumeria_graminis_22 3 1
Didymella_exigua_CBS_183.55_v1.0 3 1
Leptosphaeria_maculans_22 3 2
Setosphaeria_turcica_v1.0 3 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 3 1
Cochliobolus_victoriae_FI3_v1.0 3 1
Cochliobolus_carbonum_26-R-13_v1.0 3 1
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   3 1
Alternaria_brassicicola_ 3 1
Cochliobolus_lunatus_m118_v2.0 5 3
Pyrenophora_teres_f._teres_22 3 1
Pyrenophora_tritici-repentis_ 3 1
Stagonospora_nodorum_ 3 1
Mycosphaerella_graminicola_IPO323_ 4 2
Zasmidium_cellare_ATCC_36951_v1.0 4 2
Dothistroma_septosporum 3 1
Septoria_musiva_v1.0 4 2
Mycosphaerella_fijiensis_CIRAD86_ 3 1
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 5 2
Paracoccidioides_brasiliensis_Pb18_ 3 1
Coccidioides_posadasii_RMSCC_3488_ 3 1
Coccidioides_immitis_RS_ 3 1
Ajellomyces_dermatitidis_SLH14081_ 3 1
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 3 1
Microsporum_canis_CBS_113480_ 5 3
Trichophyton_equinum_CBS_127.97_ 3 1
Trichophyton_verrucosum_HKI_0517_ 3 1
Arthroderma_benhamiae_CBS_112371_ 3 1
Trichophyton_tonsurans_CBS_112818_ 3 1
Trichophyton_rubrum_CBS_118892_ 3 1
Uncinocarpus_reesii_1704_ 2 1
Aspergillus_zonatus_v1.0 3 1
Penicillium_chrysogenum_Wisconsin_54-1255_ 3 1
Penicillium_chrysogenum_v1.0 3 1
Aspergillus_acidus_v1.0 3 1
Aspergillus_fumigatus_Af293 3 1
Aspergillus_brasiliensis_v1.0 3 1
Aspergillus_nidulans_FGSC_A4_ 3 1
Aspergillus_sydowii_v1.0 3 1
Aspergillus_versicolor_v1.0 3 1
Aspergillus_glaucus 3 1
Aspergillus_carbonarius_ITEM_5010_ 3 1
Neosartorya_fischeri_NRRL_181_ 3 1
Aspergillus_terreus_NIH2624_ 3 1
Aspergillus_tubingensis_v1.0 3 1
Aspergillus_wentii_v1.0 3 1
Aspergillus_oryzae_RIB40_ 4 2
Aspergillus_niger_22 3 1
Aspergillus_flavus_NRRL3357_ 4 2
Aspergillus_clavatus_NRRL_1_ 3 1
Penicillium_marneffei_ATCC_18224_ 3 1
Tuber_melanosporum_Mel28_22 3 1
Tuber_melanosporum_Vittad_   (Perigord truffle)   3 1
Hansenula_polymorpha_v2.0 3 1
Dekkera_bruxellensis_CBS_2499_v2.0 3 1
Pichia_membranifaciensv1.0 3 1
Candida_tanzawaensis_NRRL_Y-17324__v1.0 3 1
Candida_dubliniensis_CD36_ 3 1
Candida_parapsilosis_ 3 1
Candida_albicans_SC5314 3 2
Lodderomyces_elongisporus_NRRL_YB-4239_ 3 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 3 1
Pichia_stipitis_CBS_6054_ 3 1
Candida_guilliermondii_ATCC_6260_ 2 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 3 1
Debaromyces_hansenii 3 1
Wickerhamomyces_anomalus 3 1
Pichia_pastoris_GS115_ 3 1
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 3 1
Yarrowia_lipolytica_CLIB122 3 1
Candida_lusitaniae_ATCC_42720_ 3 1
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 3 1
Vanderwaltozyma_polyspora_DSM_70294_ 3 1
Candida_glabrata_CBS138 4 2
Kluyveromyces_thermotolerans_CBS_6340 3 1
Lachancea_kluyveri_ 3 1
Kluyveromyces_waltii 3 1
Ashbya_gossypii_ATCC_10895_ 3 1
Zygosaccharomyces_rouxii_ 3 1
Saccharomyces_mikatae_MIT 3 2
Saccharomyces_paradoxus_MIT 3 1
Saccharomyces_cerevisiae_76   (Baker's yeast)   3 1
Saccharomyces_bayanus_MIT 2 1
Kluyveromyces_lactis 3 1
Schizosaccharomyces_cryophilus_OY26_22 8 3
Schizosaccharomyces_octosporus_yFS286_ 8 3
Schizosaccharomyces_japonicus_yFS275_ 9 3
Schizosaccharomyces_pombe   (Fission yeast)   8 3
Catenaria_anguillulae_PL171_v1.0 3 1
Allomyces_macrogynus_ATCC_38327_ 4 2
Spizellomyces_punctatus_DAOM_BR117_ 5 3
Dictyostelium_discoideum 3 1
Dictyostelium_purpureum_ 6 4
Selaginella_moellendorffii_ 12 4
Pinus_taeda   (Loblolly pine)   6 2
Picea_abies   (Norway spruce)   6 3
Eucalyptus_grandis_v201   (Rose gum)   9 3
Theobroma_cacao_B97-61/B2_v1   (Cacao)   7 3
Gossypium_raimondii_v221 93 34
Citrus_clementina_v165 16 6
Citrus_sinensis_v154   (Sweet orange)   31 11
Thellungiella_halophila_v173 28 13
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   43 22
Capsella_rubella_v183 40 22
Arabidopsis_lyrata_   (Lyrate rockcress)   65 34
Arabidopsis_thaliana_10   (Thale cress)   77 35
Carica_papaya_   (Papaya)   11 6
Medicago_truncatula_   (Barrel medic)   84 48
Phaseolus_vulgaris_v186   (French bean)   19 7
Glycine_max_v109   (Soybean)   38 13
Cucumis_sativus_v122   (Cucumber)   27 9
Fragaria_vesca_   (Wild strawberry)   22 12
Malus_domestica_v196   (Apple)   17 9
Prunus_persica_v139   (Peach)   7 3
Linum_usitatissimum_v200   (Flax)   28 14
Manihot_esculenta_v147   (Cassava)   26 10
Populus_trichocarpa_v156   (Black cottonwood)   28 14
Vitis_vinifera_   (Wine grape)   7 3
Mimulus_guttatus_v140   (Spotted monkey flower)   11 4
Solanum_lycopersicum_v.2.3   (Tomato)   34 17
Solanum_tuberosum_   (Potato)   40 16
Actinidia_chinensis_Hongyang_ 21 9
Aquilegia_coerulea_v195 27 10
Triticum_urartu_22 12 7
Triticum_aestivum_22   (Bread wheat)   22 13
Aegilops_tauschii_22 9 5
Brachypodium_distachyon_   (Stiff brome)   16 8
Oryza_barthii_22   (African wild rice)   20 12
Oryza_meridionalis_22 24 12
Oryza_glumaepatula_22 16 10
Oryza_glaberrima   (African rice)   8 6
Oryza_punctata_22 29 13
Oryza_nivara_22 23 11
Oryza_brachyantha_22   (Malo sina)   9 6
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   12 8
Oryza_sativa_v193   (Rice)   12 8
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   18 10
Panicum_virgatum_v202   (Switchgrass)   21 17
Setaria_italica_v164   (Foxtail millet)   16 10
Zea_mays_subsp._mays_   (Maize)   17 13
Zea_mays_v181   (Maize)   28 20
Sorghum_bicolor_   (Sorghum)   9 5
Musa_balbisiana   (Balbis banana)   15 6
Musa_acuminata_22   (Wild Malaysian banana)   14 6
Amborella_trichopoda_22 4 2
Physcomitrella_patens 17 8
Coccomyxa_subellipsoidea_sp._C-169_v2 5 3
Asterochloris_sp._Cgr/DA1pho_v1.0 4 2
Chlorella_variabilis_sp._NC64A_ 3 2
Chlorella_vulgaris_ 5 3
Volvox_carteri_f._nagariensis_ 3 1
Volvox_carteri_v199 3 1
Chlamydomonas_reinhardtii_4.0 3 1
Ostreococcus_sp._RCC809_ 5 2
Ostreococcus_lucimarinus_CCE9901_ 6 3
Ostreococcus_tauri_ 4 2
Bathycoccus_prasinos_ 5 2
Micromonas_sp._RCC299_ 4 2
Micromonas_pusilla_CCMP1545_v3.0 5 2
Cyanidioschyzon_merolae_strain_10D_22 3 1
Cyanidioschyzon_merolae 3 1
Porphyridium_purpureum_02_2012 4 2
Thecamonas_trahens_ATCC_50062_ 5 2
Cyanophora_paradoxa_ 6 4
Ectocarpus_siliculosus 6 2
Aureococcus_anophagefferens_ 9 8
Albugo_laibachii_22 4 2
Pythium_iwayamai_DAOM_BR242034_22 2 1
Pythium_arrhenomanes_ATCC_12531_22 7 4
Pythium_ultimum_v1.7-2 3 1
Pythium_aphanidermatum_DAOM_BR444_22 3 1
Pythium_irregulare_DAOM_BR486_22 3 1
Pythium_vexans_DAOM_BR484_22 3 1
Phytophthora_ramorum_1.1   (Sudden oak death agent)   3 1
Phytophthora_sojae_1.1 3 1
Phytophthora_infestans_T30-4_ 3 1
Phytophthora_capsici_ 3 1
Hyaloperonospora_arabidopsidis_22 3 1
Phaeodactylum_tricornutumCCAP_1055/1 5 2
Fragilariopsis_cylindrus 8 4
Thalassiosira_pseudonana_CCMP1335 7 4
Cryptosporidium_muris 2 1
Cryptosporidium_parvum_Iowa_II 2 1
Theileria_parva__ 1 1
Theileria_annulata 1 1
Naegleria_gruberi_ 2 1
Guillardia_theta_CCMP2712_v1.0_ 12 6
Emiliania_huxleyi_CCMP1516_ 10 8

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   17 7
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   20 8
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   7 3
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   3 1
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   2 2
Cryptococcus_neoformans_var._grubii_H99_ 3 1
Cryptococcus_neoformans_B-3501A_ 3 1
Cryptococcus_neoformans_JEC21_ 3 1
Paracoccidioides_brasiliensis_Pb01_ 3 1
Paracoccidioides_brasiliensis_Pb03_ 3 1
Coccidioides_posadasii_str._Silveira_ 3 1
Coccidioides_immitis_RMSCC_3703_ 3 2
Coccidioides_immitis_RMSCC_2394_ 3 2
Coccidioides_immitis_H538.4_ 3 2
Ajellomyces_dermatitidis_ER-3_ 3 1
Histoplasma_capsulatum_H143 3 1
Histoplasma_capsulatum_H88 3 1
Histoplasma_capsulatum_G186AR 3 1
Aspergillus_fumigatus_A1163_ 3 1
Candida_albicans_WO-1_ 2 1
Saccharomyces_cerevisiae_UC5 3 1
Saccharomyces_cerevisiae_PW5 3 1
Saccharomyces_cerevisiae_CLIB324 3 1
Saccharomyces_cerevisiae_YJM269 3 1
Saccharomyces_cerevisiae_T7 3 1
Saccharomyces_cerevisiae_FostersB 3 1
Saccharomyces_cerevisiae_FostersO 3 1
Saccharomyces_cerevisiae_VL3 3 1
Saccharomyces_cerevisiae_Vin13 3 1
Saccharomyces_cerevisiae_LalvinQA23 2 1
Saccharomyces_cerevisiae_AWRI796 3 1
Saccharomyces_cerevisiae_Sigma1278b 3 1
Saccharomyces_cerevisiae_W303 3 1
Saccharomyces_cerevisiae_JAY291 3 1
Saccharomyces_cerevisiae_YJM789_ 3 1
Saccharomyces_cerevisiae_YJM789 3 1
Saccharomyces_cerevisiae_RM11-1a 3 1
Saccharomyces_cerevisiae_RM11-1a_ 3 1
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   3 1
Schizosaccharomyces_pombe_972h-_ 8 3
Batrachochytrium_dendrobatidis_JEL423_ 4 2
Batrachochytrium_dendrobatidis_JAM81_ 5 2
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   8 4
Hordeum_vulgare_22   (Domesticated barley)   12 8
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   11 8

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   8 3
Pan_troglodytes_69_2.1.4   (Chimpanzee)   8 3
Gorilla_gorilla_69_3.1   (Western gorilla)   8 3
Pongo_abelii_69_2   (Sumatran orangutan)   8 3
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   6 2
Macaca_mulatta_69_1   (Rhesus monkey)   8 3
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   13 6
Otolemur_garnettii_69_3   (Small-eared galago)   8 3
Microcebus_murinus_69_1   (Gray mouse lemur)   5 3
Rattus_norvegicus_69_3.4   (Norway rat)   5 2
Mus_musculus_69_38   (House mouse)   8 3
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   8 3
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   8 3
Cavia_porcellus_69_3   (Domestic guinea pig)   8 3
Oryctolagus_cuniculus_69_2   (Rabbit)   8 3
Ochotona_princeps_69   (American pika)   8 3
Tupaia_belangeri_69   (Northern tree shrew)   6 3
Sus_scrofa_69_10.2   (Pig)   10 4
Bos_taurus_69_3.1   (Cattle)   8 3
Vicugna_pacos_69_1   (Alpaca)   6 3
Tursiops_truncatus_69_1   (Bottlenose dolphin)   8 3
Mustela_putorius_furo_69_1.0   (Domestic ferret)   8 3
Ailuropoda_melanoleuca_69_1   (Giant panda)   8 3
Canis_familiaris_69_3.1   (Dog)   8 3
Felis_catus_69   (Domestic cat)   7 3
Equus_caballus_69_2   (Horse)   8 3
Myotis_lucifugus_69_2.0   (Little brown bat)   8 3
Pteropus_vampyrus_69_1   (Large flying fox)   7 3
Sorex_araneus_69_1   (European shrew)   5 3
Erinaceus_europaeus_69   (Western European hedgehog)   4 2
Procavia_capensis_69_1   (Cape rock hyrax)   8 3
Loxodonta_africana_69_3   (African savanna elephant)   8 3
Echinops_telfairi_69   (Small Madagascar hedgehog)   6 2
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   5 2
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   4 2
Macropus_eugenii_69_1.0   (Tammar wallaby)   8 3
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   8 3
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   8 3
Ornithorhynchus_anatinus_69_5   (Platypus)   6 2
Petromyzon_marinus_69_7.0   (Sea lamprey)   3 1
Meleagris_gallopavo_69_2   (Turkey)   8 3
Gallus_gallus_69_2   (Chicken)   8 3
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   8 3
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   8 3
Anolis_carolinensis_69_2.0   (Green anole)   5 2
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   8 3
Latimeria_chalumnae_69_1   (Coelacanth)   8 3
Gadus_morhua_69_1   (Atlantic cod)   11 4
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   11 4
Takifugu_rubripes_69_4   (Torafugu)   11 4
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   11 4
Oryzias_latipes_69_1   (Japanese medaka)   10 4
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   11 5
Oreochromis_niloticus_69_1.0   (Nile tilapia)   11 4
Danio_rerio_69_9   (Zebrafish)   13 5
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   4 2
Ciona_intestinalis_69   (Vase tunicate)   5 2
Drosophila_melanogaster_69_5   (Fruit fly)   4 2
Caenorhabditis_elegans_69_215   (Roundworm)   1 1
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   3 1
Arabidopsis_thaliana_10   (Thale cress)   58 26

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   27 11
Homo_sapiens__(NCBI_version)   (Human)   14 5
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   8 3
Heliconius_numata__(Incomplete) 2 2
Loa_loa_v3.3_(Request)   (Eye worm)   3 1
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   3 1
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   3 1
Moniliophthora_perniciosa_FA553__(Genome_survey) 4 3
Encephalitozoon_intestinalis__(endoparasite) 3 1
Encephalitozoon_cuniculi_(endoparasite) 3 1
Lotus_japonicus__(Early_assembly) 10 5
Malus_x_domestica_(Duplicate)   (Apple)   17 9
Ricinus_communis__(Early_assembly)   (Castor bean)   14 9
Nicotiana_benthamiana_0.4.4_(Early_draft) 28 12
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   31 16
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   34 17
Phoenix_dactylifera__(Early_draft)   (Date palm)   11 3
PDB_chains_(SCOP_1.75)_(PDB) 3 3
Protein_Data_Bank_(all_PDB_sequenc) 13 13
STRING_v9.0.5_(STRING) 698 306
Uniprot_2018_03_genome 9433 4138
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 34 34
NCBI_2017_08_genome 9822 4009
Protozoadb_2010_08_(Protozoadb) 10 6
TargetDB__(Targets) 39 19

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