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Domain combinations for Uteroglobin-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Uteroglobin-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   14 14
Pan_troglodytes_76_2.1.4   (Chimpanzee)   11 11
Gorilla_gorilla_76_3.1   (Western gorilla)   10 10
Pongo_abelii_76_2   (Sumatran orangutan)   11 11
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   6 6
Papio_anubis_76   (Olive baboon)   8 8
Macaca_mulatta_76_1   (Rhesus monkey)   8 8
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   14 14
Otolemur_garnettii_76_3   (Small-eared galago)   3 3
Microcebus_murinus_76_1   (Gray mouse lemur)   4 4
Rattus_norvegicus_76_5.0   (Norway rat)   13 13
Mus_musculus_76_38   (House mouse)   36 36
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   3 3
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   5 5
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   6 6
Cavia_porcellus_76_3   (Domestic guinea pig)   8 8
Oryctolagus_cuniculus_76_2   (Rabbit)   14 14
Ochotona_princeps_76   (American pika)   11 11
Tupaia_belangeri_76   (Northern tree shrew)   6 6
Sus_scrofa_76_10.2   (Pig)   5 5
Bos_taurus_76_3.1   (Cattle)   9 9
Ovis_aries_76_3.1   (Sheep)   16 16
Vicugna_pacos_76_1   (Alpaca)   5 5
Tursiops_truncatus_76_1   (Bottlenose dolphin)   2 2
Mustela_putorius_furo_76_1.0   (Domestic ferret)   9 9
Ailuropoda_melanoleuca_76_1   (Giant panda)   4 4
Canis_familiaris_76_3.1   (Dog)   11 11
Felis_catus_76_6.2   (Domestic cat)   6 6
Equus_caballus_76_2   (Horse)   13 13
Myotis_lucifugus_76_2.0   (Little brown bat)   14 14
Pteropus_vampyrus_76_1   (Large flying fox)   3 3
Sorex_araneus_76_1   (European shrew)   14 14
Erinaceus_europaeus_76   (Western European hedgehog)   3 3
Procavia_capensis_76_1   (Cape rock hyrax)   5 5
Loxodonta_africana_76_3   (African savanna elephant)   4 4
Echinops_telfairi_76   (Small Madagascar hedgehog)   8 8
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   9 9
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   7 7
Macropus_eugenii_76_1.0   (Tammar wallaby)   1 1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   5 5
Ornithorhynchus_anatinus_76_5   (Platypus)   9 9
Meleagris_gallopavo_76_2   (Turkey)   2 2
Gallus_gallus_76_4   (Chicken)   3 3
Anas_platyrhynchos_76_1.0   (Mallard)   2 2
Anolis_carolinensis_76_2.0   (Green anole)   3 3
Xenopus_laevis_   (African clawed frog)   7 7
Aspergillus_zonatus_v1.0 1 1
Aspergillus_acidus_v1.0 1 1
Aspergillus_fumigatus_Af293 1 1
Aspergillus_brasiliensis_v1.0 1 1
Aspergillus_glaucus 1 1
Aspergillus_carbonarius_ITEM_5010_ 1 1
Neosartorya_fischeri_NRRL_181_ 1 1
Aspergillus_tubingensis_v1.0 1 1
Aspergillus_oryzae_RIB40_ 1 1
Aspergillus_niger_22 1 1
Aspergillus_niger_ATCC_1015_ 1 1
Aspergillus_flavus_NRRL3357_ 1 1
Aspergillus_clavatus_NRRL_1_ 1 1
Acinetobacter_sp._ADP1 1 1

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Strains
Genome     Number   Proteins
Aspergillus_fumigatus_A1163_ 1 1

Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   9 9
Pan_troglodytes_69_2.1.4   (Chimpanzee)   10 10
Gorilla_gorilla_69_3.1   (Western gorilla)   8 8
Pongo_abelii_69_2   (Sumatran orangutan)   11 11
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   6 6
Macaca_mulatta_69_1   (Rhesus monkey)   8 8
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   12 12
Otolemur_garnettii_69_3   (Small-eared galago)   3 3
Microcebus_murinus_69_1   (Gray mouse lemur)   4 4
Rattus_norvegicus_69_3.4   (Norway rat)   13 13
Mus_musculus_69_38   (House mouse)   22 22
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   3 3
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   5 5
Cavia_porcellus_69_3   (Domestic guinea pig)   8 8
Oryctolagus_cuniculus_69_2   (Rabbit)   12 12
Ochotona_princeps_69   (American pika)   11 11
Tupaia_belangeri_69   (Northern tree shrew)   6 6
Sus_scrofa_69_10.2   (Pig)   5 5
Bos_taurus_69_3.1   (Cattle)   9 9
Vicugna_pacos_69_1   (Alpaca)   5 5
Tursiops_truncatus_69_1   (Bottlenose dolphin)   2 2
Mustela_putorius_furo_69_1.0   (Domestic ferret)   9 9
Ailuropoda_melanoleuca_69_1   (Giant panda)   4 4
Canis_familiaris_69_3.1   (Dog)   10 10
Felis_catus_69   (Domestic cat)   3 3
Equus_caballus_69_2   (Horse)   13 13
Myotis_lucifugus_69_2.0   (Little brown bat)   13 13
Pteropus_vampyrus_69_1   (Large flying fox)   3 3
Sorex_araneus_69_1   (European shrew)   14 14
Erinaceus_europaeus_69   (Western European hedgehog)   3 3
Procavia_capensis_69_1   (Cape rock hyrax)   5 5
Loxodonta_africana_69_3   (African savanna elephant)   4 4
Echinops_telfairi_69   (Small Madagascar hedgehog)   8 8
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   1 1
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   7 7
Macropus_eugenii_69_1.0   (Tammar wallaby)   1 1
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   4 4
Ornithorhynchus_anatinus_69_5   (Platypus)   7 7
Meleagris_gallopavo_69_2   (Turkey)   2 2
Gallus_gallus_69_2   (Chicken)   2 2
Anolis_carolinensis_69_2.0   (Green anole)   2 2

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   13 13
Homo_sapiens__(NCBI_version)   (Human)   10 10
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   19 19
TargetDB__(Targets) 4 4
Protein_Data_Bank_(all_PDB_sequenc) 22 14
PDB_chains_(SCOP_1.75)_(PDB) 7 5
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 42 42
STRING_v9.0.5_(STRING) 145 145
Uniprot_2018_03_genome 680 679
NCBI_2017_08_genome 1141 1141

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