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Domain combinations for Phospholipase C/P1 nuclease superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Phospholipase C/P1 nuclease domain in that genome.

Complete genomes
Genome     Number   Proteins
Meleagris_gallopavo_76_2   (Turkey)   1 1
Gallus_gallus_76_4   (Chicken)   1 1
Anas_platyrhynchos_76_1.0   (Mallard)   1 1
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   1 1
Ficedula_albicollis_76_1.0   (Collared flycatcher)   1 1
Adineta_vaga 13 13
Proterospongia_sp._ATCC_50818_ 1 1
Monosiga_brevicollis_ 1 1
Sphaeroforma_arctica_JP610_ 2 2
Capsaspora_owczarzaki_ATCC_30864_ 2 2
Mortierella_verticillata_NRRL_6337_ 2 2
Sporisorium_reilianum_22 1 1
Ustilago_maydis_ 1 1
Mixia_osmundae_IAM_14324_v1.0 1 1
Melampsora_laricis-populina_ 1 1
Rhodotorula_graminis_WP1_v1.0 1 1
Microbotryum_violaceum_22 1 1
Sphaerobolus_stellatus_v1.0 2 2
Piloderma_croceum_F_1598_v1.0 2 2
Serpula_lacrymans_var._lacrymans_S7.9_ 1 1
Coniophora_puteana 1 1
Hydnomerulius_pinastri_v2.0 1 1
Paxillus_rubicundulus_Ve08.2h10_v1.0 1 1
Pisolithus_microcarpus_441_v1.0 1 1
Pisolithus_tinctorius_Marx_270_v1.0 1 1
Scleroderma_citrinum_Foug_A_v1.0 1 1
Coprinopsis_cinerea_okayama7_130_v3 2 2
Pleurotus_ostreatus_   (Oyster mushroom)   2 2
Amanita_thiersii_Skay4041_v1.0 2 2
Amanita_muscaria_Koide_v1.0   (Fly agaric)   3 3
Galerina_marginata_v1.0 3 3
Hebeloma_cylindrosporum_h7_v2.0 2 2
Laccaria_bicolor_S238N-H82_ 5 5
Agaricus_bisporus_var._bisporus_ 2 2
Schizophyllum_commune_ 3 3
Stereum_hirsutum_FP-91666_SS1__v1.0 3 3
Heterobasidion_annosum_ 2 2
Gloeophyllum_trabeumv1.0 2 2
Punctularia_strigosozonata_v1.0 4 4
Sebacina_vermifera_MAFF_305830_v1.0 1 1
Fomitiporia_mediterranea_v1.0 2 2
Tulasnella_calospora_AL13/4D_v1.0 8 8
Postia_placenta_ 2 2
Wolfiporia_cocos_MD-104_SS10__v1.0 1 1
Fomitopsis_pinicolav1.0 1 1
Fomitopsis_pinicola_FP-58527_SS1_v3.0 1 1
Phanerochaete_chrysosporium_RP-78_2.1 2 2
Dichomitus_squalens 5 3
Trametes_versicolor_v1.0 4 3
Tremella_mesenterica_   (Witches' butter)   1 1
Daldinia_eschscholzii_EC12_v1.0 2 2
Apiospora_montagnei_NRRL_25634_v1.0 2 2
Magnaporthe_poae_ATCC_64411_22 2 1
Magnaporthe_grisea_70-15_ 1 1
Podospora_anserina_ 1 1
Sporotrichum_thermophile_ATCC_42464_ 1 1
Thielavia_terrestris_NRRL_8126_ 2 2
Chaetomium_globosum_CBS_148.51_ 1 1
Neurospora_tetrasperma_ 2 2
Neurospora_discreta_FGSC_8579_ 2 2
Neurospora_crassa_OR74A_ 2 2
Cryphonectria_parasitica_   (Chestnut blight fungus)   1 1
Verticillium_albo-atrum_VaMs.102_ 3 2
Verticillium_dahliae_VdLs.17_ 2 2
Acremonium_alcalophilumv_1.0 1 1
Glomerella_graminicola_22 3 3
Fusarium_graminearum_ 1 1
Nectria_haematococca_mpVI_ 1 1
Fusarium_oxysporum_f._sp._lycopersici_4286_ 2 2
Fusarium_verticillioides_7600_ 2 2
Trichoderma_asperellum_CBS_433.97_v1.0 2 2
Trichoderma_atroviride_ 2 2
Trichoderma_citrinoviride_v1.0 2 2
Trichoderma_reesei_1.2 2 2
Trichoderma_virens_Gv29-8_ 3 3
Trichoderma_longibrachiatum_ATCC_18648_v1.0 3 3
Trichoderma_harzianum_CBS_226.95_v1.0 3 3
Amorphotheca_resinae_v1.0   (Creosote fungus)   2 2
Botrytis_cinerea_B05.10_ 2 2
Sclerotinia_sclerotiorum_ 2 2
Didymella_exigua_CBS_183.55_v1.0 2 2
Leptosphaeria_maculans_22 2 2
Setosphaeria_turcica_v1.0 1 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 1 1
Cochliobolus_victoriae_FI3_v1.0 1 1
Cochliobolus_carbonum_26-R-13_v1.0 1 1
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   1 1
Alternaria_brassicicola_ 2 2
Cochliobolus_lunatus_m118_v2.0 2 2
Pyrenophora_teres_f._teres_22 2 2
Pyrenophora_tritici-repentis_ 2 2
Stagonospora_nodorum_ 2 2
Mycosphaerella_graminicola_IPO323_ 1 1
Zasmidium_cellare_ATCC_36951_v1.0 2 2
Dothistroma_septosporum 2 2
Septoria_musiva_v1.0 2 2
Mycosphaerella_fijiensis_CIRAD86_ 3 3
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 2 2
Ajellomyces_dermatitidis_SLH14081_ 1 1
Penicillium_chrysogenum_Wisconsin_54-1255_ 1 1
Penicillium_chrysogenum_v1.0 1 1
Aspergillus_brasiliensis_v1.0 1 1
Aspergillus_terreus_NIH2624_ 1 1
Aspergillus_tubingensis_v1.0 1 1
Aspergillus_oryzae_RIB40_ 2 2
Aspergillus_niger_22 1 1
Aspergillus_niger_ATCC_1015_ 1 1
Aspergillus_flavus_NRRL3357_ 1 1
Penicillium_marneffei_ATCC_18224_ 1 1
Tuber_melanosporum_Mel28_22 1 1
Tuber_melanosporum_Vittad_   (Perigord truffle)   1 1
Catenaria_anguillulae_PL171_v1.0 10 9
Allomyces_macrogynus_ATCC_38327_ 18 13
Spizellomyces_punctatus_DAOM_BR117_ 2 2
Selaginella_moellendorffii_ 4 4
Pinus_taeda   (Loblolly pine)   7 6
Picea_abies   (Norway spruce)   4 4
Eucalyptus_grandis_v201   (Rose gum)   6 6
Theobroma_cacao_B97-61/B2_v1   (Cacao)   3 3
Gossypium_raimondii_v221 17 17
Citrus_clementina_v165 8 8
Citrus_sinensis_v154   (Sweet orange)   8 8
Thellungiella_halophila_v173 7 7
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   7 7
Capsella_rubella_v183 5 5
Arabidopsis_lyrata_   (Lyrate rockcress)   5 5
Arabidopsis_thaliana_10   (Thale cress)   6 6
Carica_papaya_   (Papaya)   2 2
Medicago_truncatula_   (Barrel medic)   16 16
Phaseolus_vulgaris_v186   (French bean)   5 5
Glycine_max_v109   (Soybean)   10 10
Cucumis_sativus_v122   (Cucumber)   4 4
Fragaria_vesca_   (Wild strawberry)   3 3
Malus_domestica_v196   (Apple)   7 7
Prunus_persica_v139   (Peach)   3 3
Linum_usitatissimum_v200   (Flax)   6 5
Manihot_esculenta_v147   (Cassava)   4 4
Populus_trichocarpa_v156   (Black cottonwood)   3 3
Vitis_vinifera_   (Wine grape)   3 3
Mimulus_guttatus_v140   (Spotted monkey flower)   8 7
Solanum_lycopersicum_v.2.3   (Tomato)   3 3
Solanum_tuberosum_   (Potato)   1 1
Actinidia_chinensis_Hongyang_ 3 3
Aquilegia_coerulea_v195 6 6
Triticum_urartu_22 9 8
Triticum_aestivum_22   (Bread wheat)   38 38
Aegilops_tauschii_22 9 9
Brachypodium_distachyon_   (Stiff brome)   9 9
Oryza_barthii_22   (African wild rice)   4 4
Oryza_meridionalis_22 5 5
Oryza_glumaepatula_22 5 5
Oryza_glaberrima   (African rice)   2 2
Oryza_punctata_22 5 5
Oryza_nivara_22 4 4
Oryza_brachyantha_22   (Malo sina)   5 4
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   5 5
Oryza_sativa_v193   (Rice)   5 5
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   3 3
Panicum_virgatum_v202   (Switchgrass)   17 17
Setaria_italica_v164   (Foxtail millet)   7 7
Zea_mays_subsp._mays_   (Maize)   10 10
Zea_mays_v181   (Maize)   10 10
Sorghum_bicolor_   (Sorghum)   7 5
Musa_balbisiana   (Balbis banana)   4 3
Musa_acuminata_22   (Wild Malaysian banana)   4 4
Amborella_trichopoda_22 3 2
Physcomitrella_patens 2 2
Thecamonas_trahens_ATCC_50062_ 1 1
Cyanophora_paradoxa_ 2 2
Leishmania_mexicana_2.4 5 5
Leishmania_major_strain_Friedlin_ 9 9
Leishmania_infantum_JPCM5_2.4 4 4
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 4 4
Trypanosoma_vivax_ 1 1
Trypanosoma_cruzi_strain_CL_Brener 1 1
Trypanosoma_congolense_2.4 3 3
Trypanosoma_brucei_gambiense_v4.1 3 3
Trypanosoma_brucei_TREU927_v4.1 3 3
Pythium_iwayamai_DAOM_BR242034_22 4 4
Pythium_ultimum_v1.7-2 9 9
Pythium_aphanidermatum_DAOM_BR444_22 3 3
Pythium_irregulare_DAOM_BR486_22 2 1
Pythium_vexans_DAOM_BR484_22 2 2
Phytophthora_ramorum_1.1   (Sudden oak death agent)   2 2
Phytophthora_sojae_1.1 2 2
Phytophthora_infestans_T30-4_ 2 2
Phytophthora_capsici_ 4 4
Hyaloperonospora_arabidopsidis_22 1 1
Phaeodactylum_tricornutumCCAP_1055/1 1 1
Fragilariopsis_cylindrus 2 2
Perkinsus_marinus_ATCC_50983_ 29 26
Paramecium_tetraurelia_ 6 6
Tetrahymena_thermophila_SB210_1_ 6 6
Ichthyophthirius_multifiliis_strain_G5_ 1 1
Cryptosporidium_hominis 1 1
Cryptosporidium_muris 1 1
Cryptosporidium_parvum_Iowa_II 1 1
Neospora_caninum 3 3
Toxoplasma_gondii_VEG 3 3
Toxoplasma_gondii_ME49 3 3
Toxoplasma_gondii_GT1 3 3
Babesia_bovis_T2Bo_ 2 2
Theileria_parva__ 1 1
Theileria_annulata 1 1
Plasmodium_falciparum_3D7_ 3 3
Plasmodium_vivax_SaI-1_7.0 4 4
Plasmodium_knowlesi_strain_H_ 3 3
Plasmodium_yoelii_ssp._yoelii_1_ 2 2
Plasmodium_chabaudi_ 2 2
Plasmodium_berghei_ANKA_ 2 2
Symbiodinium_minutum_clade_B1_v1.2 8 8
Trichomonas_vaginalis_ 21 21
Emiliania_huxleyi_CCMP1516_ 3 2
Synechocystis_sp._PCC_6803 1 1
Nostoc_punctiforme_PCC_73102 1 1
Nakamurella_multipartita_DSM_44233 1 1
Segniliparus_rotundus_DSM_44985 1 1
Tsukamurella_paurometabola_DSM_20162 1 1
Mycobacterium_abscessus_ATCC_19977 2 2
Finegoldia_magna_ATCC_29328 1 1
Natranaerobius_thermophilus_JW/NM-WN-LF 1 1
Clostridium_clariflavum_DSM_19732 1 1
Clostridium_thermocellum_ATCC_27405 1 1
Ruminococcus_albus_7 1 1
Pelotomaculum_thermopropionicum_SI 1 1
Desulfosporosinus_acidiphilus_SJ4 2 2
Desulfosporosinus_orientis_DSM_765 1 1
Desulfotomaculum_reducens_MI-1 1 1
Desulfotomaculum_kuznetsovii_DSM_6115 2 2
Desulfotomaculum_carboxydivorans_CO-1-SRB 1 1
Desulfotomaculum_ruminis_DSM_2154 2 2
Eubacterium_eligens_ATCC_27750 1 1
Clostridium_sticklandii_DSM_519 1 1
Coprococcus_sp._ART55/1 1 1
Roseburia_hominis_A2-183 1 1
Roseburia_intestinalis 1 1
Syntrophothermus_lipocalidus_DSM_12680 1 1
Heliobacterium_modesticaldum_Ice1 1 1
Alkaliphilus_metalliredigens_QYMF 2 2
Candidatus_Arthromitus_sp._SFB-mouse-Japan 1 1
Clostridium_novyi_NT 2 2
Clostridium_ljungdahlii_DSM_13528 2 2
Clostridium_kluyveri_DSM_555 1 1
Clostridium_tetani_E88 1 1
Clostridium_perfringens_ATCC_13124 3 3
Clostridium_cellulovorans_743B 1 1
Clostridium_botulinum_A_str._ATCC_3502 1 1
Clostridium_acetobutylicum_ATCC_824 4 4
Carboxydothermus_hydrogenoformans_Z-2901 1 1
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 1 1
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 1 1
Bacillus_weihenstephanensis_KBAB4 1 1
Bacillus_thuringiensis_str._Al_Hakam 1 1
Bacillus_cereus_03BB102 1 1
Bacillus_anthracis_str._A0248 1 1
Melioribacter_roseus_P3M 1 1
Ignavibacterium_album_JCM_16511 1 1
Pelodictyon_phaeoclathratiforme_BU-1 1 1
Chlorobium_luteolum_DSM_273 1 1
Chlorobium_phaeobacteroides_DSM_266 1 1
Chlorobium_phaeovibrioides_DSM_265 1 1
Chlorobium_limicola_DSM_245 1 1
Chlorobaculum_parvum_NCIB_8327 1 1
Chlorobium_tepidum_TLS 1 1
Haliscomenobacter_hydrossis_DSM_1100 2 2
Niastella_koreensis_GR20-10 3 3
Chitinophaga_pinensis_DSM_2588 2 2
Flexibacter_litoralis_DSM_6794 1 1
Candidatus_Amoebophilus_asiaticus_5a2 1 1
Candidatus_Cardinium_hertigii 1 1
Belliella_baltica_DSM_15883 2 2
Cyclobacterium_marinum_DSM_745 2 2
Marivirga_tractuosa_DSM_4126 2 2
Fibrella_aestuarina 1 1
Leadbetterella_byssophila_DSM_17132 1 1
Dyadobacter_fermentans_DSM_18053 1 1
Cytophaga_hutchinsonii_ATCC_33406 1 1
Spirosoma_linguale_DSM_74 1 1
Runella_slithyformis_DSM_19594 1 1
Paludibacter_propionicigenes_WB4 1 1
Alistipes_finegoldii_DSM_17242 3 3
Pedobacter_saltans_DSM_12145 1 1
Solitalea_canadensis_DSM_3403 2 2
Pedobacter_heparinus_DSM_2366 2 2
Sphingobacterium_sp._21 2 2
Fluviicola_taffensis_DSM_16823 1 1
Zunongwangia_profunda_SM-A87 1 1
Krokinobacter_sp._4H-3-7-5 1 1
Gramella_forsetii_KT0803 1 1
Maribacter_sp._HTCC2170 1 1
Robiginitalea_biformata_HTCC2501 1 1
Croceibacter_atlanticus_HTCC2559 1 1
Aequorivita_sublithincola_DSM_14238 1 1
Zobellia_galactanivorans 1 1
Muricauda_ruestringensis_DSM_13258 1 1
Cellulophaga_algicola_DSM_14237 1 1
Cellulophaga_lytica_DSM_7489 1 1
Flavobacteriaceae_bacterium_3519-10 1 1
Polaribacter_sp._MED152 1 1
Weeksella_virosa_DSM_16922 1 1
Flavobacterium_johnsoniae_UW101 1 1
Planctomyces_brasiliensis_DSM_5305 1 1
Planctomyces_limnophilus_DSM_3776 1 1
Rhodopirellula_baltica_SH_1 1 1
Pirellula_staleyi_DSM_6068 2 2
Opitutus_terrae_PB90-1 1 1
Turneriella_parva_DSM_21527 3 3
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 1 1
Leptospira_interrogans_serovar_Lai_str._IPAV 2 2
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 1 1
Mesotoga_prima_MesG1.Ag.4.2 2 2
Kosmotoga_olearia_TBF_19.5.1 1 1
Fervidobacterium_pennivorans_DSM_9078 2 2
Fervidobacterium_nodosum_Rt17-B1 1 1
Thermotoga_lettingae_TMO 1 1
Thermotoga_thermarum_DSM_5069 1 1
Thermotoga_sp._RQ2 1 1
Thermotoga_naphthophila_RKU-10 1 1
Thermotoga_petrophila_RKU-1 1 1
Thermotoga_neapolitana_DSM_4359 1 1
Thermotoga_maritima_MSB8 1 1
Dictyoglomus_turgidum_DSM_6724 3 3
Dictyoglomus_thermophilum_H-6-12 2 2
Caldisericum_exile_AZM16c01 1 1
Candidatus_Chloracidobacterium_thermophilum_B 1 1
Candidatus_Solibacter_usitatus_Ellin6076 3 3
Granulicella_tundricola_MP5ACTX9 1 1
Granulicella_mallensis_MP5ACTX8 2 2
Terriglobus_saanensis_SP1PR4 2 2
Terriglobus_roseus_DSM_18391 1 1
Acidobacterium_capsulatum_ATCC_51196 1 1
Thermodesulfovibrio_yellowstonii_DSM_11347 1 1
Bdellovibrio_bacteriovorus_HD100 1 1
Desulfomonile_tiedjei_DSM_6799 1 1
Syntrophobacter_fumaroxidans_MPOB 4 4
Desulfomicrobium_baculatum_DSM_4028 1 1
Geobacter_sulfurreducens_KN400 1 1
Anaeromyxobacter_sp._Fw109-5 2 2
Anaeromyxobacter_dehalogenans_2CP-1 1 1
Myxococcus_fulvus_HW-1 1 1
Dechloromonas_aromatica_RCB 1 1
Dechlorosoma_suillum_PS 1 1
Chromobacterium_violaceum_ATCC_12472 1 1
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 1 1
Rhodoferax_ferrireducens_T118 1 1
Collimonas_fungivorans_Ter331 1 1
Asticcacaulis_excentricus_CB_48 1 1
Brevundimonas_subvibrioides_ATCC_15264 1 1
Caulobacter_sp._K31 2 2
Caulobacter_crescentus_NA1000 1 1
Caulobacter_segnis_ATCC_21756 2 2
Phenylobacterium_zucineum_HLK1 1 1
Erythrobacter_litoralis_HTCC2594 1 1
Sphingobium_sp._SYK-6 1 1
Sphingobium_japonicum_UT26S 1 1
Sphingobium_chlorophenolicum_L-1 1 1
Sphingomonas_sp._MM-1 1 1
Sphingomonas_wittichii_RW1 1 1
Zymomonas_mobilis_subsp._mobilis_NCIMB_11163 1 1
Maricaulis_maris_MCS10 1 1
Hirschia_baltica_ATCC_49814 2 2
Hyphomonas_neptunium_ATCC_15444 1 1
Gluconacetobacter_diazotrophicus_PAl_5 1 1
Gluconobacter_oxydans_621H 1 1
Azorhizobium_caulinodans_ORS_571 1 1
Rhizobium_etli_CIAT_652 1 1
Mesorhizobium_loti_MAFF303099 1 1
Rhodomicrobium_vannielii_ATCC_17100 1 1
Hyphomicrobium_sp._MC1 1 1
Hyphomicrobium_denitrificans_ATCC_51888 1 1
Bradyrhizobium_sp._ORS_278 1 1
Saccharophagus_degradans_2-40 1 1
Teredinibacter_turnerae_T7901 1 1
Photobacterium_profundum_SS9 1 1
Shewanella_amazonensis_SB2B 1 1
Pseudoalteromonas_sp._SM9913 1 1
Pseudoalteromonas_atlantica_T6c 1 1
Pseudoalteromonas_haloplanktis_TAC125 1 1
Glaciecola_sp._4H-3-7+YE-5 1 1
Glaciecola_nitratireducens_FR1064 1 1
Alteromonas_sp._SN2 1 1
Alteromonas_macleodii_str._'Deep_ecotype' 1 1
Hahella_chejuensis_KCTC_2396 2 2
Rhodanobacter_denitrificans 2 2
Frateuria_aurantia_DSM_6220 1 1
Pseudoxanthomonas_spadix_BD-a59 2 2
Pseudoxanthomonas_suwonensis_11-1 1 1
Stenotrophomonas_maltophilia_K279a 1 1
Xanthomonas_axonopodis_pv._citri_str._306 1 1
Xanthomonas_albilineans_GPE_PC73 1 1
Xanthomonas_oryzae_pv._oryzae_PXO99A 1 1
Xanthomonas_campestris_pv._campestris_str._B100 2 2
Coxiella_burnetii_Dugway_5J108-111 1 1
Legionella_longbeachae_NSW150 1 1
Legionella_pneumophila_str._Corby 1 1
gamma_proteobacterium_HdN1 1 1
Pseudomonas_sp._UW4 1 1
Pseudomonas_aeruginosa_UCBPP-PA14 2 2
Pyrobaculum_sp._1860 1 1
Pyrobaculum_calidifontis_JCM_11548 1 1
Pyrobaculum_arsenaticum_DSM_13514 1 1
Pyrobaculum_oguniense_TE7 1 1
Pyrobaculum_aerophilum_str._IM2 1 1
Methanocella_conradii_HZ254 1 1
Methanococcoides_burtonii_DSM_6242 1 1
Methanosarcina_mazei_Go1 3 3
Methanosarcina_barkeri_str._Fusaro 1 1
Methanoregula_boonei_6A8 1 1
Methanoculleus_marisnigri_JR1 2 2
Ferroglobus_placidus_DSM_10642 3 3
Thermococcus_sp._4557 1 1
Thermococcus_onnurineus_NA1 1 1
Thermococcus_kodakarensis_KOD1 1 1
Thermococcus_gammatolerans_EJ3 1 1
Natrinema_sp._J7-2 1 1
Natrialba_magadii_ATCC_43099 1 1
Methanothermus_fervidus_DSM_2088 3 3
Methanothermobacter_marburgensis_str._Marburg 2 2
Methanothermobacter_thermautotrophicus_str._Delta_H 2 2

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Strains
Genome     Number   Proteins
Cryptococcus_neoformans_var._grubii_H99_ 1 1
Cryptococcus_neoformans_B-3501A_ 1 1
Cryptococcus_neoformans_JEC21_ 1 1
Ajellomyces_dermatitidis_ER-3_ 1 1
Batrachochytrium_dendrobatidis_JEL423_ 4 4
Batrachochytrium_dendrobatidis_JAM81_ 4 4
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   3 3
Hordeum_vulgare_22   (Domesticated barley)   9 9
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   5 5
Trypanosoma_brucei_Lister_427_v4.1 3 3
Neospora_caninum_Nc-Liverpool_6.2 3 3
Plasmodium_falciparum_HB3_ 3 3
Plasmodium_falciparum_Dd2_ 1 1
Chamaesiphon_minutus_PCC_6605 1 1
Synechocystis_sp._PCC_6803_substr._PCC-P 1 1
Synechocystis_sp._PCC_6803_substr._PCC-N 1 1
Synechocystis_sp._PCC_6803_substr._GT-I 1 1
Synechocystis_sp._PCC_6803 1 1
Nocardia_brasiliensis_ATCC_700358 1 1
Mycobacterium_abscessus_subsp._bolletii_50594 2 2
Clostridium_thermocellum_DSM_1313 1 1
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 1 1
Ruminococcus_champanellensis_18P13 1 1
Clostridium_acidurici_9a 1 1
Desulfosporosinus_meridiei_DSM_13257 1 1
Roseburia_intestinalis_XB6B4 1 1
Candidatus_Arthromitus_sp._SFB-rat-Yit 1 1
Candidatus_Arthromitus_sp._SFB-mouse-Yit 1 1
Clostridium_saccharobutylicum_DSM_13864 3 3
Clostridium_autoethanogenum_DSM_10061 1 1
Clostridium_kluyveri_NBRC_12016 1 1
Clostridium_tetani_genome_12124569 1 1
Clostridium_perfringens_SM101 3 3
Clostridium_perfringens_str._13 3 3
Clostridium_pasteurianum_BC1 2 2
Clostridium_botulinum_H04402_065 1 1
Clostridium_botulinum_BKT015925 3 3
Clostridium_botulinum_F_str._230613 1 1
Clostridium_botulinum_F_str._Langeland 1 1
Clostridium_botulinum_B1_str._Okra 1 1
Clostridium_botulinum_Ba4_str._657 1 1
Clostridium_botulinum_A2_str._Kyoto 1 1
Clostridium_botulinum_A3_str._Loch_Maree 1 1
Clostridium_botulinum_A_str._Hall 1 1
Clostridium_botulinum_A_str._ATCC_19397 1 1
Clostridium_acetobutylicum_DSM_1731 4 4
Clostridium_acetobutylicum_EA_2018 4 4
Listeria_monocytogenes_EGD_sequence 1 1
Listeria_monocytogenes_N53-1 1 1
Listeria_monocytogenes_La111 1 1
Listeria_monocytogenes_serotype_4b_str._LL195 1 1
Listeria_monocytogenes_07PF0776 1 1
Listeria_monocytogenes_M7 1 1
Listeria_monocytogenes_J1-220 1 1
Listeria_monocytogenes_J1816 1 1
Listeria_monocytogenes_SLCC2376 1 1
Listeria_monocytogenes_SLCC5850 1 1
Listeria_monocytogenes_ATCC_19117 1 1
Listeria_monocytogenes_L312 1 1
Listeria_monocytogenes_SLCC2479 1 1
Listeria_monocytogenes_SLCC7179 1 1
Listeria_monocytogenes_SLCC2540 1 1
Listeria_monocytogenes_SLCC2378 1 1
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 1 1
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 1 1
Listeria_monocytogenes_serotype_7_str._SLCC2482 1 1
Listeria_monocytogenes_08-5578 1 1
Listeria_monocytogenes_08-5923 1 1
Listeria_monocytogenes_L99 1 1
Listeria_monocytogenes_HCC23 1 1
Listeria_monocytogenes_10403S 1 1
Listeria_monocytogenes_J0161 1 1
Listeria_monocytogenes_Finland_1998 1 1
Listeria_monocytogenes_FSL_R2-561 1 1
Listeria_monocytogenes_serotype_4b_str._F2365 1 1
Listeria_monocytogenes_EGD-e 1 1
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 1 1
Bacillus_toyonensis_BCT-7112 2 2
Bacillus_thuringiensis_HD-771 1 1
Bacillus_thuringiensis_HD-789 1 1
Bacillus_thuringiensis_MC28 2 2
Bacillus_thuringiensis_serovar_chinensis_CT-43 1 1
Bacillus_thuringiensis_YBT-1518 1 1
Bacillus_thuringiensis_Bt407 1 1
Bacillus_thuringiensis_serovar_konkukian_str._97-27 1 1
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 1 1
Bacillus_thuringiensis_BMB171 1 1
Bacillus_thuringiensis_serovar_finitimus_YBT-020 1 1
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 1 1
Bacillus_cereus_FRI-35 1 1
Bacillus_cereus_biovar_anthracis_str._CI 1 1
Bacillus_cereus_AH820 1 1
Bacillus_cereus_AH187 1 1
Bacillus_cereus_B4264 1 1
Bacillus_cereus_G9842 1 1
Bacillus_cereus_Q1 1 1
Bacillus_cereus_F837/76 1 1
Bacillus_cereus_NC7401 1 1
Bacillus_cereus_E33L 1 1
Bacillus_cereus_ATCC_14579 1 1
Bacillus_cereus_ATCC_10987 1 1
Bacillus_anthracis_str._H9401 1 1
Bacillus_anthracis_str._CDC_684 1 1
Bacillus_anthracis_str._'Ames_Ancestor' 1 1
Bacillus_anthracis_str._Sterne 1 1
Bacillus_anthracis_str._Ames 1 1
Echinicola_vietnamensis_DSM_17526 2 2
Emticicia_oligotrophica_DSM_17448 2 2
Alistipes_shahii_WAL_8301 4 4
Nonlabens_dokdonensis_DSW-6 1 1
Psychroflexus_torquis_ATCC_700755 1 1
Singulisphaera_acidiphila_DSM_18658 2 2
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 1 1
Leptospira_interrogans_serovar_Lai_str._56601 2 2
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 2 2
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 1 1
Thermotoga_maritima_MSB8 1 1
Bdellovibrio_exovorus_JSS 2 2
Bdellovibrio_bacteriovorus_str._Tiberius 1 1
Geobacter_sp._M18 1 1
Geobacter_sulfurreducens_PCA 1 1
Anaeromyxobacter_sp._K 1 1
Anaeromyxobacter_dehalogenans_2CP-C 1 1
Ralstonia_solanacearum_FQY_4 1 1
Ralstonia_solanacearum_GMI1000 1 1
Caulobacter_crescentus_CB15 1 1
Zymomonas_mobilis_subsp._mobilis_ATCC_29191 1 1
Zymomonas_mobilis_subsp._mobilis_CP4 1 1
Zymomonas_mobilis_subsp._mobilis_ATCC_10988 1 1
Zymomonas_mobilis_subsp._mobilis_ZM4 1 1
Gluconacetobacter_diazotrophicus_PAl_5 1 1
Gluconobacter_oxydans_H24 1 1
Sinorhizobium_fredii_USDA_257 1 1
Hyphomicrobium_nitrativorans_NL23 1 1
Hyphomicrobium_denitrificans_1NES1 1 1
Rhodopseudomonas_palustris_TIE-1 1 1
Bradyrhizobium_sp._BTAi1 1 1
Bradyrhizobium_oligotrophicum_S58 1 1
Vibrio_nigripulchritudo_VibrioScope 1 1
Glaciecola_psychrophila_170 1 1
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 1 1
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 1 1
Alteromonas_macleodii_str._'Ionian_Sea_U8' 1 1
Alteromonas_macleodii_str._'Ionian_Sea_U7' 1 1
Alteromonas_macleodii_str._'Ionian_Sea_U4' 1 1
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 1 1
Alteromonas_macleodii_str._'English_Channel_615' 1 1
Alteromonas_macleodii_AltDE1 1 1
Alteromonas_macleodii_str._'English_Channel_673' 1 1
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 1 1
Alteromonas_macleodii_str._'Black_Sea_11' 1 1
Alteromonas_macleodii_ATCC_27126 1 1
Thalassolituus_oleivorans_MIL-1 1 1
Stenotrophomonas_maltophilia_D457 1 1
Stenotrophomonas_maltophilia_JV3 1 1
Stenotrophomonas_maltophilia_R551-3 1 1
Xanthomonas_citri_subsp._citri_Aw12879 1 1
Xanthomonas_campestris_pv._vesicatoria_str._85-10 1 1
Xanthomonas_axonopodis_pv._citrumelo_F1 1 1
Xanthomonas_axonopodis_Xac29-1 1 1
Xanthomonas_oryzae_pv._oryzicola_BLS256 1 1
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 1 1
Xanthomonas_oryzae_pv._oryzae_KACC_10331 1 1
Xanthomonas_campestris_pv._raphani_756C 2 2
Xanthomonas_campestris_pv._campestris_str._8004 2 2
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 2 2
Thioalkalivibrio_nitratireducens_DSM_14787 1 1
Legionella_pneumophila_str._Paris 1 1
Legionella_pneumophila_str._Lens 1 1
Legionella_pneumophila_subsp._pneumophila_LPE509 1 1
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 1 1
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 1 1
Legionella_pneumophila_subsp._pneumophila 1 1
Legionella_pneumophila_subsp._pneumophila 1 1
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 1 1
Legionella_pneumophila_2300/99_Alcoy 1 1
Pseudomonas_denitrificans_ATCC_13867 1 1
Pseudomonas_fluorescens_R124 1 1
Pseudomonas_resinovorans_NBRC_106553 1 1
Pseudomonas_aeruginosa_SCV20265 2 2
Pseudomonas_aeruginosa_MTB-1 2 2
Pseudomonas_aeruginosa_LES431 2 2
Pseudomonas_aeruginosa_RP73 2 2
Pseudomonas_aeruginosa_B136-33 2 2
Pseudomonas_aeruginosa_PA1R 2 2
Pseudomonas_aeruginosa_PA1 2 2
Pseudomonas_aeruginosa_DK2 2 2
Pseudomonas_aeruginosa_NCGM2.S1 2 2
Pseudomonas_aeruginosa_M18 2 2
Pseudomonas_aeruginosa_LESB58 2 2
Pseudomonas_aeruginosa_PA7 2 2
Pseudomonas_aeruginosa_PAO1 2 2
Methanomethylovorans_hollandica_DSM_15978 1 1
Methanosarcina_mazei_Tuc01 2 2
Methanoregula_formicica_Methanoregula_formicicum_SMSP 2 2
Thermococcus_sp._AM4 1 1
Thermococcus_sp._CL1 1 1
Candidatus_Methanomassiliicoccus_intestinalis_Issoire-Mx1 1 1

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Longest transcript per gene
Genome     Number   Proteins
Meleagris_gallopavo_69_2   (Turkey)   1 1
Gallus_gallus_69_2   (Chicken)   1 1
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   1 1
Arabidopsis_thaliana_10   (Thale cress)   5 5

Others
Genome     Number   Proteins
Moniliophthora_perniciosa_FA553__(Genome_survey) 2 2
Lotus_japonicus__(Early_assembly) 5 5
Malus_x_domestica_(Duplicate)   (Apple)   7 7
Ricinus_communis__(Early_assembly)   (Castor bean)   4 4
Nicotiana_benthamiana_0.4.4_(Early_draft) 7 7
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   3 3
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   3 3
Phoenix_dactylifera__(Early_draft)   (Date palm)   4 4
NCBI_plasmid_sequences_(Plasmids) 11 11
UniProt__viral_sequences_(Viral) 3 3
Uniprot_2018_03_genome 8000 7913
NCBI_2017_08_genome 18478 18429
NCBI_viral_sequences_(Viral) 3 3
TargetDB__(Targets) 18 18
Protein_Data_Bank_(all_PDB_sequenc) 47 47
PDB_chains_(SCOP_1.75)_(PDB) 7 7
Protozoadb_2010_08_(Protozoadb) 115 115
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 128 128
STRING_v9.0.5_(STRING) 320 320

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