SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain combinations for Serum albumin-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Serum albumin-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   48 20
Pan_troglodytes_76_2.1.4   (Chimpanzee)   14 5
Gorilla_gorilla_76_3.1   (Western gorilla)   24 9
Pongo_abelii_76_2   (Sumatran orangutan)   14 5
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   14 5
Papio_anubis_76   (Olive baboon)   13 5
Macaca_mulatta_76_1   (Rhesus monkey)   41 17
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   17 6
Otolemur_garnettii_76_3   (Small-eared galago)   11 4
Microcebus_murinus_76_1   (Gray mouse lemur)   13 5
Rattus_norvegicus_76_5.0   (Norway rat)   17 6
Mus_musculus_76_38   (House mouse)   21 8
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   16 5
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   11 4
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   13 5
Cavia_porcellus_76_3   (Domestic guinea pig)   17 6
Oryctolagus_cuniculus_76_2   (Rabbit)   16 6
Ochotona_princeps_76   (American pika)   15 5
Tupaia_belangeri_76   (Northern tree shrew)   17 6
Sus_scrofa_76_10.2   (Pig)   17 8
Bos_taurus_76_3.1   (Cattle)   14 5
Ovis_aries_76_3.1   (Sheep)   21 8
Vicugna_pacos_76_1   (Alpaca)   13 4
Tursiops_truncatus_76_1   (Bottlenose dolphin)   14 5
Mustela_putorius_furo_76_1.0   (Domestic ferret)   17 6
Ailuropoda_melanoleuca_76_1   (Giant panda)   14 5
Canis_familiaris_76_3.1   (Dog)   20 7
Felis_catus_76_6.2   (Domestic cat)   13 5
Equus_caballus_76_2   (Horse)   16 6
Myotis_lucifugus_76_2.0   (Little brown bat)   19 7
Pteropus_vampyrus_76_1   (Large flying fox)   12 4
Sorex_araneus_76_1   (European shrew)   9 3
Erinaceus_europaeus_76   (Western European hedgehog)   10 4
Procavia_capensis_76_1   (Cape rock hyrax)   13 5
Loxodonta_africana_76_3   (African savanna elephant)   21 8
Echinops_telfairi_76   (Small Madagascar hedgehog)   14 4
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   19 7
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   11 4
Macropus_eugenii_76_1.0   (Tammar wallaby)   12 4
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   19 7
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   16 6
Ornithorhynchus_anatinus_76_5   (Platypus)   9 4
Petromyzon_marinus_76_7.0   (Sea lamprey)   1 1
Meleagris_gallopavo_76_2   (Turkey)   9 3
Gallus_gallus_76_4   (Chicken)   9 3
Anas_platyrhynchos_76_1.0   (Mallard)   9 3
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   3 1
Ficedula_albicollis_76_1.0   (Collared flycatcher)   9 3
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   12 5
Anolis_carolinensis_76_2.0   (Green anole)   10 4
Xenopus_laevis_   (African clawed frog)   40 14
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   9 3
Latimeria_chalumnae_76_1   (Coelacanth)   9 3
Lepisosteus_oculatus_76   (Spotted gar)   4 2
Gadus_morhua_76_1   (Atlantic cod)   2 1
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   4 2
Takifugu_rubripes_76_4   (Torafugu)   2 2
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   3 2
Oryzias_latipes_76_1   (Japanese medaka)   1 1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   2 1
Poecilia_formosa_76   (Amazon molly)   2 1
Oreochromis_niloticus_76_1.0   (Nile tilapia)   6 2
Astyanax_mexicanus_76   (Mexican tetra)   5 2
Danio_rerio_76_9   (Zebrafish)   5 3
Capitella_sp._I_ 1 1
Drosophila_virilis_1.2 1 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   17 6

Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   14 5
Pan_troglodytes_69_2.1.4   (Chimpanzee)   14 5
Gorilla_gorilla_69_3.1   (Western gorilla)   17 6
Pongo_abelii_69_2   (Sumatran orangutan)   14 5
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   14 5
Macaca_mulatta_69_1   (Rhesus monkey)   15 6
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   14 5
Otolemur_garnettii_69_3   (Small-eared galago)   11 4
Microcebus_murinus_69_1   (Gray mouse lemur)   13 5
Rattus_norvegicus_69_3.4   (Norway rat)   17 7
Mus_musculus_69_38   (House mouse)   17 6
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   16 5
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   11 4
Cavia_porcellus_69_3   (Domestic guinea pig)   14 5
Oryctolagus_cuniculus_69_2   (Rabbit)   20 7
Ochotona_princeps_69   (American pika)   15 5
Tupaia_belangeri_69   (Northern tree shrew)   17 6
Sus_scrofa_69_10.2   (Pig)   17 8
Bos_taurus_69_3.1   (Cattle)   14 5
Vicugna_pacos_69_1   (Alpaca)   13 4
Tursiops_truncatus_69_1   (Bottlenose dolphin)   14 5
Mustela_putorius_furo_69_1.0   (Domestic ferret)   17 6
Ailuropoda_melanoleuca_69_1   (Giant panda)   14 5
Canis_familiaris_69_3.1   (Dog)   14 5
Felis_catus_69   (Domestic cat)   9 3
Equus_caballus_69_2   (Horse)   16 6
Myotis_lucifugus_69_2.0   (Little brown bat)   19 7
Pteropus_vampyrus_69_1   (Large flying fox)   12 4
Sorex_araneus_69_1   (European shrew)   9 3
Erinaceus_europaeus_69   (Western European hedgehog)   10 4
Procavia_capensis_69_1   (Cape rock hyrax)   13 5
Loxodonta_africana_69_3   (African savanna elephant)   16 6
Echinops_telfairi_69   (Small Madagascar hedgehog)   14 4
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   6 2
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   11 4
Macropus_eugenii_69_1.0   (Tammar wallaby)   12 4
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   14 5
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   16 6
Ornithorhynchus_anatinus_69_5   (Platypus)   9 4
Petromyzon_marinus_69_7.0   (Sea lamprey)   1 1
Meleagris_gallopavo_69_2   (Turkey)   9 3
Gallus_gallus_69_2   (Chicken)   12 4
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   3 1
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   10 4
Anolis_carolinensis_69_2.0   (Green anole)   10 4
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   6 2
Latimeria_chalumnae_69_1   (Coelacanth)   9 3
Gadus_morhua_69_1   (Atlantic cod)   2 1
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   4 2
Takifugu_rubripes_69_4   (Torafugu)   2 2
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   2 1
Oryzias_latipes_69_1   (Japanese medaka)   1 1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   2 1
Oreochromis_niloticus_69_1.0   (Nile tilapia)   3 1
Danio_rerio_69_9   (Zebrafish)   5 3

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   44 18
Homo_sapiens__(NCBI_version)   (Human)   23 9
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   16 6
NCBI_2017_08_genome 3679 1426
PDB_chains_(SCOP_1.75)_(PDB) 31 11
STRING_v9.0.5_(STRING) 255 99
Protein_Data_Bank_(all_PDB_sequenc) 623 209
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 1980 1980
TargetDB__(Targets) 4 2
Uniprot_2018_03_genome 2475 966

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]