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Domain combinations for Carbohydrate-binding domain superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Carbohydrate-binding domain domain in that genome.

Complete genomes
Genome     Number   Proteins
Oikopleura_dioica 2 2
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   1 1
Ciona_intestinalis_76   (Vase tunicate)   3 3
Adineta_vaga 2 2
Octopus_bimaculoides_280 3 3
Crassostrea_gigas_22   (Pacific oyster)   10 8
Lottia_gigantea_   (Owl limpet)   11 10
Helobdella_robusta_ 1 1
Capitella_sp._I_ 3 3
Daphnia_pulex_   (Common water flea)   3 3
Meloidogyne_incognita_   (Southern root-knot nematode)   14 14
Meloidogyne_hapla_ 3 3
Mnemiopsis_leidyi   (Sea walnut)   2 1
Acropora_digitifera_v1.0 4 4
Nematostella_vectensis_1.0   (Starlet sea anemone)   3 3
Amphimedon_queenslandica 2 1
Proterospongia_sp._ATCC_50818_ 11 7
Monosiga_brevicollis_ 3 2
Sphaeroforma_arctica_JP610_ 4 3
Capsaspora_owczarzaki_ATCC_30864_ 1 1
Spizellomyces_punctatus_DAOM_BR117_ 1 1
Dictyostelium_discoideum 28 25
Dictyostelium_purpureum_ 22 21
Selaginella_moellendorffii_ 2 2
Eucalyptus_grandis_v201   (Rose gum)   1 1
Citrus_clementina_v165 1 1
Citrus_sinensis_v154   (Sweet orange)   1 1
Thellungiella_halophila_v173 1 1
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   1 1
Capsella_rubella_v183 1 1
Carica_papaya_   (Papaya)   2 2
Phaseolus_vulgaris_v186   (French bean)   1 1
Glycine_max_v109   (Soybean)   1 1
Cucumis_sativus_v122   (Cucumber)   1 1
Fragaria_vesca_   (Wild strawberry)   1 1
Malus_domestica_v196   (Apple)   3 3
Linum_usitatissimum_v200   (Flax)   7 7
Vitis_vinifera_   (Wine grape)   1 1
Mimulus_guttatus_v140   (Spotted monkey flower)   1 1
Solanum_lycopersicum_v.2.3   (Tomato)   1 1
Solanum_tuberosum_   (Potato)   1 1
Triticum_aestivum_22   (Bread wheat)   1 1
Brachypodium_distachyon_   (Stiff brome)   1 1
Oryza_brachyantha_22   (Malo sina)   1 1
Physcomitrella_patens 2 2
Chlorella_variabilis_sp._NC64A_ 1 1
Cyanophora_paradoxa_ 1 1
Plasmodium_yoelii_ssp._yoelii_1_ 1 1
Guillardia_theta_CCMP2712_v1.0_ 1 1
Synechocystis_sp._PCC_6803 2 1
Synechococcus_sp._PCC_6312 3 2
Synechococcus_sp._CC9311 1 1
Microcoleus_sp._PCC_7113 1 1
Gloeocapsa_sp._PCC_7428 1 1
Rivularia_sp._PCC_7116 3 2
Calothrix_sp._PCC_7507 1 1
Nostoc_sp._PCC_7524 1 1
Conexibacter_woesei_DSM_14684 1 1
Ilumatobacter_coccineus 1 1
Acidimicrobium_ferrooxidans_DSM_10331 2 1
Thermobispora_bispora_DSM_43833 16 16
Acidothermus_cellulolyticus_11B 19 10
Catenulispora_acidiphila_DSM_44928 33 32
Stackebrandtia_nassauensis_DSM_44728 2 2
Frankia_sp._EAN1pec 1 1
Thermobifida_fusca_YX 16 15
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 14 14
Thermomonospora_curvata_DSM_43183 2 2
Streptosporangium_roseum_DSM_43021 19 17
Kitasatospora_setae_KM-6054 16 15
Streptomyces_coelicolor_A3(2) 15 15
Streptomyces_sp._PAMC26508 15 15
Streptomyces_flavogriseus_ATCC_33331 15 15
Streptomyces_sp._SirexAA-E 13 13
Streptomyces_griseus_subsp._griseus_NBRC_13350 4 4
Streptomyces_bingchenggensis_BCW-1 6 6
Streptomyces_violaceusniger_Tu_4113 3 3
Streptomyces_avermitilis_MA-4680 12 12
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 4 4
Streptomyces_scabiei_87.22 16 16
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 12 12
Actinosynnema_mirum_DSM_43827 30 30
Saccharomonospora_viridis_DSM_43017 1 1
Amycolatopsis_mediterranei_U32 32 31
Kribbella_flavida_DSM_17836 1 1
Nocardioides_sp._JS614 3 1
Salinispora_arenicola_CNS-205 6 6
Salinispora_tropica_CNB-440 7 7
Verrucosispora_maris_AB-18-032 36 35
Micromonospora_sp._L5 43 42
Micromonospora_aurantiaca_ATCC_27029 43 42
Actinoplanes_sp._N902-109 46 45
Actinoplanes_sp._SE50/110 27 27
Actinoplanes_missouriensis_431 24 23
Mycobacterium_massiliense_str._GO_06 1 1
Mycobacterium_abscessus_ATCC_19977 1 1
Mycobacterium_intracellulare_ATCC_13950 1 1
Mycobacterium_avium_104 1 1
Mycobacterium_vanbaalenii_PYR-1 2 1
Mycobacterium_canettii_CIPT_140010059 1 1
Mycobacterium_africanum_GM041182 2 2
Mycobacterium_tuberculosis_KZN_1435 2 2
Mycobacterium_tuberculosis 1 1
Mycobacterium_ulcerans_Agy99 5 3
Mycobacterium_gilvum_PYR-GCK 2 1
Mycobacterium_marinum_M 5 3
Leifsonia_xyli_subsp._xyli_str._CTCB07 1 1
Microbacterium_testaceum_StLB037 2 2
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 2 2
Jonesia_denitrificans_DSM_20603 11 10
Xylanimonas_cellulosilytica_DSM_15894 8 8
Cellulomonas_flavigena_DSM_20109 39 35
Cellulomonas_fimi_ATCC_484 20 18
[Cellvibrio]_gilvus_ATCC_13127 19 17
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 2 2
Herpetosiphon_aurantiacus_DSM_785 15 14
Chloroflexus_aggregans_DSM_9485 2 1
Deinococcus_maricopensis_DSM_21211 2 2
Clostridium_clariflavum_DSM_19732 74 27
Eubacterium_siraeum 2 2
Clostridium_cellulolyticum_H10 22 12
Clostridium_thermocellum_ATCC_27405 53 28
Ruminococcus_bromii 4 4
Ruminococcus_albus_7 11 10
butyrate-producing_bacterium_SS3/4 1 1
butyrate-producing_bacterium_SM4/1 1 1
Desulfosporosinus_orientis_DSM_765 1 1
Desulfitobacterium_hafniense_Y51 1 1
Desulfitobacterium_dehalogenans_ATCC_51507 1 1
Desulfotomaculum_acetoxidans_DSM_771 5 2
Acetobacterium_woodii_DSM_1030 2 2
Eubacterium_eligens_ATCC_27750 2 2
Eubacterium_limosum_KIST612 2 2
Clostridium_saccharolyticum_WM1 2 2
Clostridium_phytofermentans_ISDg 6 5
Clostridium_lentocellum_DSM_5427 28 22
[Ruminococcus]_torques 1 1
Eubacterium_rectale_M104/1 2 1
Eubacterium_rectale_ATCC_33656 3 2
Coprococcus_sp._ART55/1 2 2
Roseburia_hominis_A2-183 1 1
Butyrivibrio_proteoclasticus_B316 11 8
Butyrivibrio_fibrisolvens 11 10
Candidatus_Arthromitus_sp._SFB-mouse-Japan 1 1
Clostridium_sp._BNL1100 19 11
Clostridium_ljungdahlii_DSM_13528 1 1
Clostridium_perfringens_ATCC_13124 5 5
Clostridium_cellulovorans_743B 27 17
Clostridium_botulinum_A_str._ATCC_3502 1 1
Clostridium_acetobutylicum_ATCC_824 9 4
Mahella_australiensis_50-1_BON 2 2
Caldicellulosiruptor_obsidiansis_OB47 10 4
Caldicellulosiruptor_kronotskyensis_2002 16 8
Caldicellulosiruptor_lactoaceticus_6A 16 6
Caldicellulosiruptor_kristjanssonii_177R1B 6 3
Caldicellulosiruptor_saccharolyticus_DSM_8903 12 6
Caldicellulosiruptor_bescii_DSM_6725 16 7
Tepidanaerobacter_acetatoxydans_Re1 1 1
Acetohalobium_arabaticum_DSM_5501 1 1
Halothermothrix_orenii_H_168 1 1
Halanaerobium_hydrogeniformans 1 1
Halanaerobium_praevalens_DSM_2228 1 1
Lactobacillus_casei_ATCC_334 1 1
Lactobacillus_plantarum_JDM1 1 1
Paenibacillus_sp._JDR-2 20 19
Paenibacillus_terrae_HPL-003 5 5
Paenibacillus_mucilaginosus_3016 13 13
Paenibacillus_polymyxa_M1 5 5
Bacillus_selenitireducens_MLS10 1 1
Solibacillus_silvestris_StLB046 1 1
Oceanobacillus_iheyensis_HTE831 1 1
Bacillus_sp._JS 1 1
Bacillus_amyloliquefaciens_FZB42 1 1
Bacillus_subtilis_subsp._subtilis_str._168 1 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 2 2
Bacillus_weihenstephanensis_KBAB4 1 1
Bacillus_thuringiensis_str._Al_Hakam 3 3
Bacillus_cereus_03BB102 3 3
Bacillus_anthracis_str._A0248 1 1
Bacillus_pumilus_SAFR-032 1 1
Candidatus_Cloacamonas_acidaminovorans 3 2
Melioribacter_roseus_P3M 5 3
Haliscomenobacter_hydrossis_DSM_1100 34 28
Niastella_koreensis_GR20-10 4 2
Chitinophaga_pinensis_DSM_2588 1 1
Salinibacter_ruber_M8 2 2
Rhodothermus_marinus_DSM_4252 1 1
Cyclobacterium_marinum_DSM_745 1 1
Fibrella_aestuarina 4 2
Dyadobacter_fermentans_DSM_18053 1 1
Spirosoma_linguale_DSM_74 4 3
Runella_slithyformis_DSM_19594 2 2
Prevotella_melaninogenica_ATCC_25845 1 1
Bacteroides_thetaiotaomicron_VPI-5482 1 1
Bacteroides_fragilis_YCH46 1 1
Pedobacter_saltans_DSM_12145 1 1
Solitalea_canadensis_DSM_3403 2 2
Sphingobacterium_sp._21 1 1
Robiginitalea_biformata_HTCC2501 1 1
Ornithobacterium_rhinotracheale_DSM_15997 1 1
Capnocytophaga_canimorsus_Cc5 1 1
Rhodopirellula_baltica_SH_1 1 1
Akkermansia_muciniphila_ATCC_BAA-835 1 1
Spirochaeta_thermophila_DSM_6192 2 2
Marinitoga_piezophila_KA3 2 2
Mesotoga_prima_MesG1.Ag.4.2 2 2
Kosmotoga_olearia_TBF_19.5.1 1 1
Thermosipho_melanesiensis_BI429 1 1
Caldisericum_exile_AZM16c01 2 2
Candidatus_Chloracidobacterium_thermophilum_B 1 1
Candidatus_Solibacter_usitatus_Ellin6076 1 1
Granulicella_tundricola_MP5ACTX9 1 1
Granulicella_mallensis_MP5ACTX8 2 2
Candidatus_Koribacter_versatilis_Ellin345 1 1
Terriglobus_saanensis_SP1PR4 2 2
Terriglobus_roseus_DSM_18391 3 3
Acidobacterium_capsulatum_ATCC_51196 1 1
Candidatus_Nitrospira_defluvii 1 1
candidate_division_SR1_bacterium_RAAC1_SR1_1 1 1
Syntrophobacter_fumaroxidans_MPOB 2 2
Desulfatibacillum_alkenivorans_AK-01 6 6
Desulfococcus_oleovorans_Hxd3 2 2
Geobacter_daltonii_FRC-32 2 2
Geobacter_sp._M21 2 2
Geobacter_uraniireducens_Rf4 3 3
Geobacter_lovleyi_SZ 1 1
Geobacter_bemidjiensis_Bem 3 3
Geobacter_sulfurreducens_KN400 2 2
Geobacter_metallireducens_GS-15 3 3
Pelobacter_carbinolicus_DSM_2380 1 1
Haliangium_ochraceum_DSM_14365 2 2
Sorangium_cellulosum_'So_ce_56' 9 9
Stigmatella_aurantiaca_DW4/3-1 7 7
Chromobacterium_violaceum_ATCC_12472 1 1
Leptothrix_cholodnii_SP-6 1 1
Ralstonia_solanacearum_CFBP2957 3 3
Burkholderia_sp._RPE64 1 1
Burkholderia_thailandensis_E264 1 1
Burkholderia_pseudomallei_1106a 1 1
Burkholderia_mallei_SAVP1 1 1
Burkholderia_ambifaria_AMMD 1 1
Burkholderia_cenocepacia_HI2424 1 1
Burkholderia_vietnamiensis_G4 1 1
Burkholderia_gladioli_BSR3 2 2
Acidovorax_citrulli_AAC00-1 2 2
Acidovorax_avenae_subsp._avenae_ATCC_19860 2 2
Nitrosospira_multiformis_ATCC_25196 1 1
Nitrosomonas_sp._Is79A3 1 1
Nitrosomonas_eutropha_C91 1 1
Nitrosomonas_europaea_ATCC_19718 1 1
Sideroxydans_lithotrophicus_ES-1 1 1
Methylotenera_versatilis_301 1 1
Asticcacaulis_excentricus_CB_48 1 1
Azorhizobium_caulinodans_ORS_571 2 1
Saccharophagus_degradans_2-40 20 19
Teredinibacter_turnerae_T7901 28 27
Cellvibrio_japonicus_Ueda107 25 24
Aeromonas_veronii_B565 1 1
Aeromonas_salmonicida_subsp._salmonicida_A449 2 2
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 1 1
Aliivibrio_salmonicida_LFI1238 1 1
Vibrio_fischeri_MJ11 1 1
Vibrio_sp._Ex25 1 1
Vibrio_harveyi_ATCC_BAA-1116 1 1
Vibrio_parahaemolyticus_RIMD_2210633 1 1
Vibrio_splendidus_LGP32 1 1
Vibrio_anguillarum_775 1 1
Vibrio_furnissii_NCTC_11218 1 1
Vibrio_vulnificus_MO6-24/O 1 1
Vibrio_cholerae_O395 1 1
Photobacterium_profundum_SS9 2 2
Ferrimonas_balearica_DSM_9799 1 1
Shewanella_piezotolerans_WP3 1 1
Shewanella_loihica_PV-4 1 1
Shewanella_halifaxensis_HAW-EB4 1 1
Shewanella_sediminis_HAW-EB3 1 1
Shewanella_denitrificans_OS217 1 1
Shewanella_pealeana_ATCC_700345 1 1
Shewanella_oneidensis_MR-1 1 1
Shewanella_baltica_OS185 2 2
Shewanella_woodyi_ATCC_51908 2 2
Shewanella_sp._MR-4 1 1
Shewanella_amazonensis_SB2B 1 1
Shewanella_violacea_DSS12 5 5
Shewanella_putrefaciens_CN-32 1 1
Colwellia_psychrerythraea_34H 2 2
Pseudoalteromonas_sp._SM9913 1 1
Pseudoalteromonas_atlantica_T6c 4 4
Glaciecola_sp._4H-3-7+YE-5 2 2
Alteromonas_sp._SN2 1 1
Hahella_chejuensis_KCTC_2396 11 10
Methylomonas_methanica_MC09 1 1
Methylococcus_capsulatus_str._Bath 6 3
Xylella_fastidiosa_M23 2 2
Xanthomonas_axonopodis_pv._citri_str._306 1 1
Xanthomonas_albilineans_GPE_PC73 5 5
Xanthomonas_oryzae_pv._oryzae_PXO99A 1 1
Xanthomonas_campestris_pv._campestris_str._B100 1 1
Nitrosococcus_watsonii_C-113 1 1
Photorhabdus_asymbiotica 1 1
Photorhabdus_luminescens_subsp._laumondii_TTO1 1 1
Xenorhabdus_bovienii_SS-2004 1 1
Xenorhabdus_nematophila_ATCC_19061 1 1
Providencia_stuartii_MRSN_2154 1 1
Edwardsiella_ictaluri_93-146 1 1
Edwardsiella_tarda_EIB202 1 1
Yersinia_pseudotuberculosis_IP_31758 1 1
Yersinia_pestis_Pestoides_F 1 1
Yersinia_enterocolitica_subsp._enterocolitica_8081 1 1
Serratia_sp._AS12 1 1
Serratia_plymuthica_AS9 1 1
Serratia_proteamaculans_568 1 1
Pectobacterium_wasabiae_WPP163 1 1
Pectobacterium_sp._SCC3193 1 1
Pectobacterium_atrosepticum_SCRI1043 1 1
Pectobacterium_carotovorum_subsp._carotovorum_PC1 1 1
Pantoea_sp._At-9b 1 1
Pantoea_vagans_C9-1 1 1
Erwinia_billingiae_Eb661 1 1
Escherichia_blattae_DSM_4481 1 1
Cronobacter_turicensis_z3032 1 1
Cronobacter_sakazakii_ES15 1 1
Enterobacter_sp._R4-368 1 1
Pyrobaculum_islandicum_DSM_4184 1 1
Methanococcoides_burtonii_DSM_6242 3 3
Methanosarcina_acetivorans_C2A 2 2
Methanosarcina_mazei_Go1 2 2
Methanohalophilus_mahii_DSM_5219 2 2
Methanosphaerula_palustris_E1-9c 6 5
Methanospirillum_hungatei_JF-1 3 3
Methanoplanus_petrolearius_DSM_11571 1 1
Methanoculleus_bourgensis_MS2 3 3
Ferroglobus_placidus_DSM_10642 1 1
Archaeoglobus_fulgidus_DSM_4304 2 2
Thermococcus_kodakarensis_KOD1 2 1
Pyrococcus_furiosus_COM1 1 1
Salinarchaeum_sp._Harcht-Bsk1 1 1
Halopiger_xanaduensis_SH-6 2 2
Haloterrigena_turkmenica_DSM_5511 2 2
Natrinema_sp._J7-2 1 1
Natrialba_magadii_ATCC_43099 3 3
Halogeometricum_borinquense_DSM_11551 1 1
Haloferax_mediterranei_ATCC_33500 1 1
Halorhabdus_utahensis_DSM_12940 2 2
Natronomonas_pharaonis_DSM_2160 4 4
Haloarcula_hispanica_ATCC_33960 1 1
Haloarcula_marismortui_ATCC_43049 3 3
Methanotorris_igneus_Kol_5 6 3
methanocaldococcus_infernus_ME 4 3
Methanothermococcus_okinawensis_IH1 8 5
Methanococcus_aeolicus_Nankai-3 4 3
Methanococcus_maripaludis_C5 1 1
Methanococcus_voltae_A3 3 2
Methanococcus_vannielii_SB 4 3

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Strains
Genome     Number   Proteins
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   1 1
Synechocystis_sp._PCC_6803_substr._PCC-P 2 1
Synechocystis_sp._PCC_6803_substr._PCC-N 2 1
Synechocystis_sp._PCC_6803_substr._GT-I 2 1
Synechocystis_sp._PCC_6803 2 1
Cyanobium_gracile_PCC_6307 1 1
Synechococcus_sp._RCC307 4 2
Synechococcus_sp._WH_7803 5 3
Prochlorococcus_marinus_str._MIT_9303 4 2
Cyanobacterium_aponinum_PCC_10605 3 1
Stanieria_cyanosphaera_PCC_7437 6 5
Calothrix_parietina_Calothrix_sp._PCC_6303 1 1
Adlercreutzia_equolifaciens_DSM_19450 1 1
Frankia_sp._EuI1c 1 1
Nocardiopsis_alba_ATCC_BAA-2165 3 3
Streptomyces_albus_J1074 3 3
Streptomyces_rapamycinicus_NRRL_5491 5 5
Streptomyces_davawensis_JCM_4913 17 17
Streptomyces_fulvissimus_DSM_40593 6 6
Streptomyces_venezuelae_ATCC_10712 9 9
Streptomyces_collinus_Tu_365 6 6
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 4 4
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 12 12
Saccharothrix_espanaensis_DSM_44229 8 7
Amycolatopsis_mediterranei_RB 32 31
Amycolatopsis_mediterranei_S699 32 31
Amycolatopsis_mediterranei_S699 32 31
Amycolatopsis_orientalis_HCCB10007 6 6
Actinoplanes_friuliensis_DSM_7358 32 32
Mycobacterium_abscessus_subsp._bolletii_50594 1 1
Mycobacterium_liflandii_128FXT 1 1
Mycobacterium_avium_subsp._paratuberculosis_MAP4 1 1
Mycobacterium_avium_subsp._paratuberculosis_K-10 1 1
Mycobacterium_canettii_CIPT_140070017 1 1
Mycobacterium_canettii_CIPT_140060008 2 2
Mycobacterium_canettii_CIPT_140070008 2 2
Mycobacterium_canettii_CIPT_140070010 1 1
Mycobacterium_tuberculosis_EAI5/NITR206 1 1
Mycobacterium_tuberculosis_EAI5 2 2
Mycobacterium_tuberculosis_CAS/NITR204 1 1
Mycobacterium_tuberculosis_str._Beijing/NITR203 1 1
Mycobacterium_tuberculosis_UT205 1 1
Mycobacterium_tuberculosis_RGTB423 1 1
Mycobacterium_tuberculosis_RGTB327 1 1
Mycobacterium_tuberculosis_CTRI-2 2 2
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 1 1
Mycobacterium_tuberculosis_KZN_605 2 2
Mycobacterium_tuberculosis_KZN_4207 2 2
Mycobacterium_tuberculosis_CCDC5079 2 2
Mycobacterium_tuberculosis_CCDC5079 2 2
Mycobacterium_tuberculosis_H37Ra 1 1
Mycobacterium_tuberculosis_str._Haarlem/NITR202 1 1
Mycobacterium_tuberculosis_str._Haarlem 2 2
Mycobacterium_tuberculosis_F11 2 2
Mycobacterium_tuberculosis_H37Rv 1 1
Mycobacterium_tuberculosis_CDC1551 2 2
Mycobacterium_bovis_AF2122/97 2 2
Mycobacterium_bovis_BCG_str._Tokyo_172 1 1
Mycobacterium_gilvum_Spyr1 2 1
Mycobacterium_kansasii_ATCC_12478 2 2
Clavibacter_michiganensis_subsp._sepedonicus 1 1
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 2 2
Bifidobacterium_thermophilum_RBL67 3 2
Eubacterium_siraeum_V10Sc8a 2 2
Clostridium_thermocellum_DSM_1313 47 28
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 3 2
Ruminococcus_champanellensis_18P13 15 12
Desulfosporosinus_meridiei_DSM_13257 1 1
Desulfitobacterium_hafniense_DCB-2 1 1
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 1 1
Candidatus_Arthromitus_sp._SFB-rat-Yit 1 1
Candidatus_Arthromitus_sp._SFB-mouse-Yit 1 1
Clostridium_saccharobutylicum_DSM_13864 1 1
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 6 3
Clostridium_perfringens_SM101 1 1
Clostridium_perfringens_str._13 5 5
Clostridium_botulinum_H04402_065 1 1
Clostridium_botulinum_F_str._230613 1 1
Clostridium_botulinum_F_str._Langeland 1 1
Clostridium_botulinum_B1_str._Okra 1 1
Clostridium_botulinum_A2_str._Kyoto 1 1
Clostridium_botulinum_A3_str._Loch_Maree 1 1
Clostridium_botulinum_A_str._Hall 1 1
Clostridium_botulinum_A_str._ATCC_19397 1 1
Clostridium_acetobutylicum_DSM_1731 9 4
Clostridium_acetobutylicum_EA_2018 9 4
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 2 1
Halobacteroides_halobius_DSM_5150 1 1
Enterococcus_faecalis_OG1RF 1 1
Enterococcus_faecalis_V583 1 1
Lactobacillus_plantarum_16 1 1
Lactobacillus_plantarum_ZJ316 1 1
Lactobacillus_plantarum_subsp._plantarum_ST-III 1 1
Lactobacillus_plantarum_subsp._plantarum_P-8 1 1
Lactobacillus_plantarum_WCFS1 1 1
Thermobacillus_composti_KWC4 2 2
Paenibacillus_sp._Y412MC10 1 1
Paenibacillus_mucilaginosus_KNP414 13 13
Paenibacillus_mucilaginosus_K02 14 14
Paenibacillus_polymyxa_CR1 4 4
Paenibacillus_polymyxa_SC2 5 5
Paenibacillus_polymyxa_E681 5 5
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 1 1
Bacillus_amyloliquefaciens_LFB112 1 1
Bacillus_amyloliquefaciens_CC178 1 1
Bacillus_amyloliquefaciens_Y2 1 1
Bacillus_amyloliquefaciens_IT-45 1 1
Bacillus_licheniformis_9945A 2 2
Bacillus_subtilis_PY79 1 1
Bacillus_subtilis_XF-1 1 1
Bacillus_subtilis_QB928 1 1
Bacillus_subtilis_BSn5 1 1
Bacillus_subtilis_subsp._subtilis_str._BAB-1 1 1
Bacillus_subtilis_subsp._subtilis_str._BSP1 1 1
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 1 1
Bacillus_subtilis_subsp._subtilis_6051-HGW 1 1
Bacillus_subtilis_subsp._spizizenii_TU-B-10 1 1
Bacillus_subtilis_subsp._spizizenii_str._W23 1 1
Bacillus_subtilis_subsp._natto_BEST195 1 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 2 2
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 1 1
Bacillus_toyonensis_BCT-7112 3 3
Bacillus_thuringiensis_HD-771 1 1
Bacillus_thuringiensis_HD-789 1 1
Bacillus_thuringiensis_MC28 2 2
Bacillus_thuringiensis_serovar_chinensis_CT-43 1 1
Bacillus_thuringiensis_YBT-1518 1 1
Bacillus_thuringiensis_Bt407 1 1
Bacillus_thuringiensis_serovar_konkukian_str._97-27 1 1
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 1 1
Bacillus_thuringiensis_BMB171 1 1
Bacillus_thuringiensis_serovar_finitimus_YBT-020 1 1
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 1 1
Bacillus_cereus_FRI-35 3 3
Bacillus_cereus_biovar_anthracis_str._CI 3 3
Bacillus_cereus_AH820 1 1
Bacillus_cereus_AH187 2 2
Bacillus_cereus_B4264 2 2
Bacillus_cereus_G9842 1 1
Bacillus_cereus_Q1 2 2
Bacillus_cereus_F837/76 3 3
Bacillus_cereus_NC7401 2 2
Bacillus_cereus_E33L 2 2
Bacillus_cereus_ATCC_14579 1 1
Bacillus_cereus_ATCC_10987 2 2
Bacillus_anthracis_str._H9401 1 1
Bacillus_anthracis_str._CDC_684 1 1
Bacillus_anthracis_str._'Ames_Ancestor' 1 1
Bacillus_anthracis_str._Sterne 1 1
Bacillus_anthracis_str._Ames 1 1
Salinibacter_ruber_DSM_13855 2 2
Rhodothermus_marinus_SG0.5JP17-172 4 3
Echinicola_vietnamensis_DSM_17526 2 1
Bacteroides_xylanisolvens_XB1A 2 2
Bacteroides_fragilis_638R 1 1
Bacteroides_fragilis_NCTC_9343 1 1
Spirochaeta_thermophila_DSM_6578 2 2
Geobacter_sp._M18 2 2
Geobacter_sulfurreducens_PCA 2 2
Sorangium_cellulosum_So0157-2 9 9
Myxococcus_stipitatus_DSM_14675 1 1
Ralstonia_solanacearum_FQY_4 2 2
Ralstonia_solanacearum_Po82 2 2
Ralstonia_solanacearum_PSI07 1 1
Ralstonia_solanacearum_GMI1000 3 3
Burkholderia_sp._YI23 1 1
Burkholderia_sp._KJ006 1 1
Burkholderia_thailandensis_MSMB121 1 1
Burkholderia_pseudomallei_MSHR305 1 1
Burkholderia_pseudomallei_NCTC_13179 1 1
Burkholderia_pseudomallei_BPC006 1 1
Burkholderia_pseudomallei_1026b 1 1
Burkholderia_pseudomallei_MSHR346 1 1
Burkholderia_pseudomallei_668 1 1
Burkholderia_pseudomallei_1710b 1 1
Burkholderia_pseudomallei_K96243 1 1
Burkholderia_mallei_NCTC_10229 1 1
Burkholderia_mallei_NCTC_10247 1 1
Burkholderia_mallei_ATCC_23344 1 1
Burkholderia_lata 1 1
Burkholderia_ambifaria_MC40-6 1 1
Burkholderia_cenocepacia_MC0-3 1 1
Burkholderia_cenocepacia_AU_1054 1 1
Burkholderia_cenocepacia_J2315 1 1
Nitrosomonas_sp._AL212 1 1
Simiduia_agarivorans_SA1_=_DSM_21679 4 3
Aeromonas_hydrophila_ML09-119 1 1
Vibrio_fischeri_ES114 1 1
Vibrio_sp._EJY3 1 1
Vibrio_parahaemolyticus_BB22OP 1 1
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 1 1
Vibrio_anguillarum_Listonella_anguillarum_M3 1 1
Vibrio_nigripulchritudo_VibrioScope 1 1
Vibrio_vulnificus_CMCP6 1 1
Vibrio_vulnificus_YJ016 1 1
Vibrio_cholerae_LMA3984-4 1 1
Vibrio_cholerae_M66-2 1 1
Vibrio_cholerae_O395 1 1
Vibrio_cholerae_IEC224 1 1
Vibrio_cholerae_O1_str._2010EL-1786 1 1
Vibrio_cholerae_MJ-1236 1 1
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 1 1
Shewanella_sp._W3-18-1 1 1
Shewanella_sp._ANA-3 1 1
Shewanella_baltica_BA175 2 2
Shewanella_baltica_OS678 2 2
Shewanella_baltica_OS117 1 1
Shewanella_baltica_OS223 2 2
Shewanella_baltica_OS195 2 2
Shewanella_baltica_OS155 1 1
Shewanella_sp._MR-7 1 1
Shewanella_putrefaciens_200 1 1
Alteromonas_macleodii_str._'English_Channel_673' 1 1
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 2 2
Alteromonas_macleodii_str._'Black_Sea_11' 1 1
Alteromonas_macleodii_ATCC_27126 1 1
Alcanivorax_dieselolei_B5 1 1
Xylella_fastidiosa_subsp._fastidiosa_GB514 2 2
Xylella_fastidiosa_M12 1 1
Xylella_fastidiosa_Temecula1 2 2
Xylella_fastidiosa_9a5c 2 2
Xanthomonas_citri_subsp._citri_Aw12879 1 1
Xanthomonas_campestris_pv._vesicatoria_str._85-10 1 1
Xanthomonas_axonopodis_pv._citrumelo_F1 1 1
Xanthomonas_axonopodis_Xac29-1 1 1
Xanthomonas_oryzae_pv._oryzicola_BLS256 1 1
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 1 1
Xanthomonas_oryzae_pv._oryzae_KACC_10331 1 1
Xanthomonas_campestris_pv._raphani_756C 1 1
Xanthomonas_campestris_pv._campestris_str._8004 1 1
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 1 1
Edwardsiella_tarda_C07-087 1 1
Edwardsiella_tarda_FL6-60 1 1
Yersinia_pseudotuberculosis_PB1/+ 1 1
Yersinia_pseudotuberculosis_YPIII 1 1
Yersinia_pseudotuberculosis_IP_32953 1 1
Yersinia_pestis_A1122 1 1
Yersinia_pestis_Z176003 1 1
Yersinia_pestis_D182038 1 1
Yersinia_pestis_D106004 1 1
Yersinia_pestis_Nepal516 1 1
Yersinia_pestis_Antiqua 1 1
Yersinia_enterocolitica_subsp._palearctica_Y11 1 1
Serratia_sp._AS13 1 1
Serratia_plymuthica_S13 1 1
Serratia_plymuthica_4Rx13 1 1
Serratia_marcescens_FGI94 1 1
Serratia_marcescens_WW4 1 1
Serratia_liquefaciens_ATCC_27592 1 1
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 1 1
Cronobacter_sakazakii_CMCC_45402 1 1
Cronobacter_sakazakii_SP291 1 1
Cronobacter_sakazakii_ATCC_BAA-894 1 1
Methanolobus_psychrophilus_R15 3 3
Methanosarcina_mazei_Tuc01 2 2
Archaeoglobus_sulfaticallidus_PM70-1 5 4
Pyrococcus_furiosus_DSM_3638 1 1
Natrinema_pellirubrum_DSM_15624 1 1
Natronococcus_occultus_SP4 1 1
Natronobacterium_gregoryi_SP2 2 2
Halorhabdus_tiamatea_SARL4B 1 1
Haloarcula_hispanica_N601 1 1
Methanococcus_maripaludis_X1 4 3

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Longest transcript per gene
Genome     Number   Proteins
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   1 1
Ciona_intestinalis_69   (Vase tunicate)   3 3

Others
Genome     Number   Proteins
Malus_x_domestica_(Duplicate)   (Apple)   3 3
Nicotiana_benthamiana_0.4.4_(Early_draft) 1 1
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   1 1
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   1 1
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 1 1
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 1 1
NCBI_plasmid_sequences_(Plasmids) 27 27
STRING_v9.0.5_(STRING) 804 695
Uniprot_2018_03_genome 22690 20914
PDB_chains_(SCOP_1.75)_(PDB) 26 26
NCBI_2017_08_genome 46595 44691
Protozoadb_2010_08_(Protozoadb) 1 1
UniProt__viral_sequences_(Viral) 7 7
NCBI_viral_sequences_(Viral) 7 6
TargetDB__(Targets) 80 41
Protein_Data_Bank_(all_PDB_sequenc) 167 163
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 382 382

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