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Domain combinations for Alpha-macroglobulin receptor domain superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Alpha-macroglobulin receptor domain domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   35 35
Pan_troglodytes_76_2.1.4   (Chimpanzee)   7 7
Gorilla_gorilla_76_3.1   (Western gorilla)   16 16
Pongo_abelii_76_2   (Sumatran orangutan)   9 9
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   9 9
Papio_anubis_76   (Olive baboon)   12 12
Macaca_mulatta_76_1   (Rhesus monkey)   12 12
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   23 23
Otolemur_garnettii_76_3   (Small-eared galago)   6 6
Microcebus_murinus_76_1   (Gray mouse lemur)   7 7
Rattus_norvegicus_76_5.0   (Norway rat)   15 15
Mus_musculus_76_38   (House mouse)   11 11
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   3 3
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   9 9
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   8 8
Cavia_porcellus_76_3   (Domestic guinea pig)   12 12
Oryctolagus_cuniculus_76_2   (Rabbit)   12 12
Ochotona_princeps_76   (American pika)   5 5
Tupaia_belangeri_76   (Northern tree shrew)   6 6
Sus_scrofa_76_10.2   (Pig)   15 15
Bos_taurus_76_3.1   (Cattle)   13 13
Ovis_aries_76_3.1   (Sheep)   14 14
Vicugna_pacos_76_1   (Alpaca)   5 5
Tursiops_truncatus_76_1   (Bottlenose dolphin)   7 7
Mustela_putorius_furo_76_1.0   (Domestic ferret)   13 13
Ailuropoda_melanoleuca_76_1   (Giant panda)   10 10
Canis_familiaris_76_3.1   (Dog)   13 13
Felis_catus_76_6.2   (Domestic cat)   13 13
Equus_caballus_76_2   (Horse)   14 14
Myotis_lucifugus_76_2.0   (Little brown bat)   16 16
Pteropus_vampyrus_76_1   (Large flying fox)   9 9
Sorex_araneus_76_1   (European shrew)   5 5
Erinaceus_europaeus_76   (Western European hedgehog)   5 5
Procavia_capensis_76_1   (Cape rock hyrax)   8 8
Loxodonta_africana_76_3   (African savanna elephant)   16 16
Echinops_telfairi_76   (Small Madagascar hedgehog)   8 8
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   14 13
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   7 7
Macropus_eugenii_76_1.0   (Tammar wallaby)   6 6
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   8 8
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   10 10
Ornithorhynchus_anatinus_76_5   (Platypus)   10 10
Saccoglossus_kowalevskii_v3.0 9 9
Petromyzon_marinus_76_7.0   (Sea lamprey)   5 5
Meleagris_gallopavo_76_2   (Turkey)   15 15
Gallus_gallus_76_4   (Chicken)   12 12
Anas_platyrhynchos_76_1.0   (Mallard)   13 13
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   13 13
Ficedula_albicollis_76_1.0   (Collared flycatcher)   14 14
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   15 15
Anolis_carolinensis_76_2.0   (Green anole)   14 14
Xenopus_laevis_   (African clawed frog)   28 28
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   28 28
Latimeria_chalumnae_76_1   (Coelacanth)   13 13
Lepisosteus_oculatus_76   (Spotted gar)   16 16
Gadus_morhua_76_1   (Atlantic cod)   17 17
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   17 17
Takifugu_rubripes_76_4   (Torafugu)   81 81
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   20 20
Oryzias_latipes_76_1   (Japanese medaka)   20 20
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   9 9
Poecilia_formosa_76   (Amazon molly)   14 12
Oreochromis_niloticus_76_1.0   (Nile tilapia)   21 21
Astyanax_mexicanus_76   (Mexican tetra)   13 13
Danio_rerio_76_9   (Zebrafish)   38 38
Oikopleura_dioica 1 1
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   7 7
Ciona_intestinalis_76   (Vase tunicate)   5 5
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   14 13
Adineta_vaga 7 7
Octopus_bimaculoides_280 9 9
Crassostrea_gigas_22   (Pacific oyster)   11 11
Lottia_gigantea_   (Owl limpet)   14 13
Helobdella_robusta_ 9 9
Capitella_sp._I_ 10 10
Danaus_plexippus_OGS1.0   (Monarch butterfly)   3 3
Heliconius_melpomene_   (Postman butterfly)   1 1
Bombyx_mori_   (Domestic silkworm)   2 2
Nasonia_vitripennis_   (Jewel wasp)   3 3
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   21 21
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   3 3
Linepithema_humile_v1.1   (Argentine ant)   3 3
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   3 3
Solenopsis_invicta_v.2.2.3   (Red fire ant)   3 3
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   3 3
Atta_cephalotes_v1.1 2 2
Camponotus_floridanus_v3.3   (Florida carpenter ant)   3 3
Lucilia_cuprina   (Australian sheep blowfly)   19 12
Drosophila_grimshawi_1.3 6 6
Drosophila_willistoni_1.3 4 4
Drosophila_pseudoobscura_2.13 5 5
Drosophila_persimilis_1.3 5 5
Drosophila_suzukii 7 6
Drosophila_yakuba_1.3 6 6
Drosophila_simulans_1.3 5 5
Drosophila_sechellia_1.3 7 7
Drosophila_melanogaster_76_5   (Fruit fly)   14 13
Drosophila_erecta_1.3 6 6
Drosophila_ananassae_1.3 5 5
Drosophila_virilis_1.2 4 4
Drosophila_mojavensis_1.3 6 6
Megaselia_scalaris_22 2 2
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   8 8
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   9 8
Anopheles_darlingi_22   (American malaria mosquito)   6 5
Anopheles_gambiae_49_3j   (African malaria mosquito)   12 12
Tribolium_castaneum_3.0   (Red flour beetle)   4 4
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   3 3
Acyrthosiphon_pisum_   (Pea aphid)   2 2
Rhodnius_prolixus_22 2 2
Daphnia_pulex_   (Common water flea)   8 8
Strigamia_maritima_22 6 6
Sarcoptes_scabiei 3 3
Tetranychus_urticae_   (Two-spotted spider mite)   3 3
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   6 6
Pristionchus_pacificus_ 1 1
Meloidogyne_hapla_ 1 1
Onchocerca_volvulus_22 1 1
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   2 2
Caenorhabditis_brenneri_ 2 2
Caenorhabditis_remanei_ 1 1
Caenorhabditis_elegans_76_235   (Roundworm)   6 6
Caenorhabditis_briggsae_2 1 1
Trichinella_spiralis_22 1 1
Hymenolepis_microstoma_ 3 3
Echinococcus_multilocularis_ 2 2
Echinococcus_granulosus_ 1 1
Taenia_solium_   (Pork tapeworm)   3 3
Schistosoma_mansoni_ 2 2
Mnemiopsis_leidyi   (Sea walnut)   1 1
Acropora_digitifera_v1.0 5 5
Nematostella_vectensis_1.0   (Starlet sea anemone)   2 2
Hydra_vulgaris 3 3
Trichoplax_adhaerens_ 2 2
Capsaspora_owczarzaki_ATCC_30864_ 1 1
Bathycoccus_prasinos_ 1 1
Micromonas_sp._RCC299_ 1 1
Symbiodinium_minutum_clade_B1_v1.2 1 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 1 1
Anaerolinea_thermophila_UNI-1 1 1
Flexibacter_litoralis_DSM_6794 1 1
Candidatus_Solibacter_usitatus_Ellin6076 1 1
Haliangium_ochraceum_DSM_14365 1 1
Sorangium_cellulosum_'So_ce_56' 1 1
Methanococcoides_burtonii_DSM_6242 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   34 33
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   11 10
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   12 12
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   1 1
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   3 3
Chthonomonas_calidirosea_T49 1 1
Sorangium_cellulosum_So0157-2 1 1
Methanolobus_psychrophilus_R15 1 1

Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   16 16
Pan_troglodytes_69_2.1.4   (Chimpanzee)   7 7
Gorilla_gorilla_69_3.1   (Western gorilla)   10 10
Pongo_abelii_69_2   (Sumatran orangutan)   9 9
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   8 8
Macaca_mulatta_69_1   (Rhesus monkey)   9 9
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   10 10
Otolemur_garnettii_69_3   (Small-eared galago)   6 6
Microcebus_murinus_69_1   (Gray mouse lemur)   7 7
Rattus_norvegicus_69_3.4   (Norway rat)   9 9
Mus_musculus_69_38   (House mouse)   9 9
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   3 3
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   7 7
Cavia_porcellus_69_3   (Domestic guinea pig)   7 7
Oryctolagus_cuniculus_69_2   (Rabbit)   10 10
Ochotona_princeps_69   (American pika)   5 5
Tupaia_belangeri_69   (Northern tree shrew)   6 6
Sus_scrofa_69_10.2   (Pig)   9 9
Bos_taurus_69_3.1   (Cattle)   11 11
Vicugna_pacos_69_1   (Alpaca)   5 5
Tursiops_truncatus_69_1   (Bottlenose dolphin)   7 7
Mustela_putorius_furo_69_1.0   (Domestic ferret)   13 13
Ailuropoda_melanoleuca_69_1   (Giant panda)   10 10
Canis_familiaris_69_3.1   (Dog)   10 10
Felis_catus_69   (Domestic cat)   7 7
Equus_caballus_69_2   (Horse)   9 9
Myotis_lucifugus_69_2.0   (Little brown bat)   15 15
Pteropus_vampyrus_69_1   (Large flying fox)   9 9
Sorex_araneus_69_1   (European shrew)   5 5
Erinaceus_europaeus_69   (Western European hedgehog)   5 5
Procavia_capensis_69_1   (Cape rock hyrax)   8 8
Loxodonta_africana_69_3   (African savanna elephant)   10 10
Echinops_telfairi_69   (Small Madagascar hedgehog)   8 8
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   7 7
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   7 7
Macropus_eugenii_69_1.0   (Tammar wallaby)   6 6
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   6 6
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   8 8
Ornithorhynchus_anatinus_69_5   (Platypus)   8 8
Petromyzon_marinus_69_7.0   (Sea lamprey)   3 3
Meleagris_gallopavo_69_2   (Turkey)   11 11
Gallus_gallus_69_2   (Chicken)   10 10
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   12 12
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   12 12
Anolis_carolinensis_69_2.0   (Green anole)   9 9
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   23 23
Latimeria_chalumnae_69_1   (Coelacanth)   11 11
Gadus_morhua_69_1   (Atlantic cod)   8 8
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   11 11
Takifugu_rubripes_69_4   (Torafugu)   17 17
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   14 14
Oryzias_latipes_69_1   (Japanese medaka)   17 17
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   9 9
Oreochromis_niloticus_69_1.0   (Nile tilapia)   17 17
Danio_rerio_69_9   (Zebrafish)   27 27
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   4 4
Ciona_intestinalis_69   (Vase tunicate)   4 4
Drosophila_melanogaster_69_5   (Fruit fly)   7 6
Caenorhabditis_elegans_69_215   (Roundworm)   1 1

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   35 35
Homo_sapiens__(NCBI_version)   (Human)   19 19
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   9 9
Loa_loa_v3.3_(Request)   (Eye worm)   2 2
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   1 1
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   1 1
Protein_Data_Bank_(all_PDB_sequenc) 94 94
PDB_chains_(SCOP_1.75)_(PDB) 3 3
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 153 153
STRING_v9.0.5_(STRING) 406 404
Uniprot_2018_03_genome 4467 4416
NCBI_2017_08_genome 5133 5115
TargetDB__(Targets) 7 7

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